RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 J3QR89 54 aa9.97□□□□□ -0.81
TRAF4-204ENST00000422344 KRTAP3-3Q9BYR6 98 aa9.96□□□□□ -0.82
TRAF4-204ENST00000422344 LINC00208Q96KT6 92 aa9.93□□□□□ -0.82
TRAF4-204ENST00000422344 MP68P56378 58 aa9.92□□□□□ -0.82
TRAF4-204ENST00000422344 KLKP1Q107X0 134 aa9.89□□□□□ -0.83
TRAF4-204ENST00000422344 OCR1Q9BZK8 76 aa9.88□□□□□ -0.83
TRAF4-204ENST00000422344 NDUFC1O43677 76 aa9.87□□□□□ -0.83
TRAF4-204ENST00000422344 NEBP20929 6669 aa9.87□□□□□ -0.83
TRAF4-204ENST00000422344 A8MUN3 132 aa9.86□□□□□ -0.83
TRAF4-204ENST00000422344 SPRR2GQ9BYE4 73 aa9.86□□□□□ -0.83
TRAF4-204ENST00000422344 Q5VV11 94 aa9.84□□□□□ -0.83
TRAF4-204ENST00000422344 IMUPQ9GZP8 106 aa9.83□□□□□ -0.84
TRAF4-204ENST00000422344 SCGB1A1P11684 91 aa9.79□□□□□ -0.84
TRAF4-204ENST00000422344 KRTAP19-8Q3LI54 63 aa9.78□□□□□ -0.84
TRAF4-204ENST00000422344 CRIPTQ9P021 101 aa9.78□□□□□ -0.84
TRAF4-204ENST00000422344 MUC12Q9UKN1 5478 aa9.77□□□□□ -0.85
TRAF4-204ENST00000422344 MT1BP07438 61 aa9.76□□□□□ -0.85
TRAF4-204ENST00000422344 H3BPC8 53 aa9.75□□□□□ -0.85
TRAF4-204ENST00000422344 H0YAA0 97 aa9.72□□□□□ -0.85
TRAF4-204ENST00000422344 A6NN06 94 aa9.71□□□□□ -0.86
TRAF4-204ENST00000422344 ADM2Q7Z4H4 148 aa9.65□□□□□ -0.86
TRAF4-204ENST00000422344 KRTAP20-1Q3LI63 56 aa9.64□□□□□ -0.87
TRAF4-204ENST00000422344 K7ERU9 68 aa9.59□□□□□ -0.87
TRAF4-204ENST00000422344 DMAC1Q96GE9 116 aa9.58□□□□□ -0.88
TRAF4-204ENST00000422344 MT-ATP8P03928 68 aa9.55□□□□□ -0.88
TRAF4-204ENST00000422344 KRTAP10-5P60370 271 aa9.55□□□□□ -0.88
TRAF4-204ENST00000422344 SMIM20Q8N5G0 67 aa9.52□□□□□ -0.89
TRAF4-204ENST00000422344 C20orf197Q8N268 126 aa9.48□□□□□ -0.89
TRAF4-204ENST00000422344 TRAV7A0A075B6U4 112 aa9.47□□□□□ -0.89
TRAF4-204ENST00000422344 MDN1Q9NU22 5596 aa9.46□□□□□ -0.89
TRAF4-204ENST00000422344 KRTAP5-9P26371 169 aa9.46□□□□□ -0.9
TRAF4-204ENST00000422344 KMT2DO14686 5537 aa9.45□□□□□ -0.9
TRAF4-204ENST00000422344 R4GN34 69 aa9.42□□□□□ -0.9
TRAF4-204ENST00000422344 P0C880 135 aa9.39□□□□□ -0.91
TRAF4-204ENST00000422344 ACYP2P14621 99 aa9.39□□□□□ -0.91
TRAF4-204ENST00000422344 M0QZ58 72 aa9.34□□□□□ -0.91
TRAF4-204ENST00000422344 PLAC4Q8WY50 150 aa9.34□□□□□ -0.91
TRAF4-204ENST00000422344 SPTSSBQ8NFR3 76 aa9.32□□□□□ -0.92
TRAF4-204ENST00000422344 PRO2289Q9P1D8 64 aa9.3□□□□□ -0.92
TRAF4-204ENST00000422344 KRTAP3-2Q9BYR7 98 aa9.29□□□□□ -0.92
TRAF4-204ENST00000422344 SNURFQ9Y675 71 aa9.28□□□□□ -0.92
TRAF4-204ENST00000422344 CHKB-CPT1BH3BT56 60 aa9.27□□□□□ -0.93
TRAF4-204ENST00000422344 KRTAP2-3P0C7H8 128 aa9.25□□□□□ -0.93
TRAF4-204ENST00000422344 KRTAP2-4Q9BYR9 128 aa9.25□□□□□ -0.93
TRAF4-204ENST00000422344 LINC01554Q52M75 96 aa9.22□□□□□ -0.93
TRAF4-204ENST00000422344 MT1XP80297 61 aa9.18□□□□□ -0.94
TRAF4-204ENST00000422344 SERP2Q8N6R1 65 aa9.17□□□□□ -0.94
TRAF4-204ENST00000422344 SPANXA2-OT1Q8N9U9 137 aa9.15□□□□□ -0.94
TRAF4-204ENST00000422344 SPRR2FQ96RM1 72 aa9.1□□□□□ -0.95
TRAF4-204ENST00000422344 SPRR2EP22531 72 aa9.09□□□□□ -0.95
TRAF4-204ENST00000422344 SPRR2BP35325 72 aa9.09□□□□□ -0.95
TRAF4-204ENST00000422344 SPRR2AP35326 72 aa9.09□□□□□ -0.95
TRAF4-204ENST00000422344 KRTAP12-2P59991 146 aa8.96□□□□□ -0.98
TRAF4-204ENST00000422344 KRTAP2-2Q9BYT5 123 aa8.93□□□□□ -0.98
TRAF4-204ENST00000422344 KRTAP2-1Q9BYU5 128 aa8.93□□□□□ -0.98
TRAF4-204ENST00000422344 KRTAP8-1Q8IUC2 63 aa8.92□□□□□ -0.98
TRAF4-204ENST00000422344 COA5Q86WW8 74 aa8.9□□□□□ -0.98
TRAF4-204ENST00000422344 COX7CP15954 63 aa8.89□□□□□ -0.99
TRAF4-204ENST00000422344 LCE1AQ5T7P2 110 aa8.88□□□□□ -0.99
TRAF4-204ENST00000422344 SEC61GP60059 68 aa8.79□□□□□ -1
TRAF4-204ENST00000422344 SPRR2DP22532 72 aa8.78□□□□□ -1
TRAF4-204ENST00000422344 KRTAP13-4Q3LI77 160 aa8.78□□□□□ -1
TRAF4-204ENST00000422344 KRTAP10-7P60409 375 aaPredicted RBP8.77□□□□□ -1.01
TRAF4-204ENST00000422344 KRTAP4-8A0A0G2JLE6 195 aa8.76□□□□□ -1.01
TRAF4-204ENST00000422344 KRTAP4-8Q9BYQ9 185 aa8.76□□□□□ -1.01
TRAF4-204ENST00000422344 SERP1Q9Y6X1 66 aa8.76□□□□□ -1.01
TRAF4-204ENST00000422344 H7BZZ5 65 aa8.73□□□□□ -1.01
TRAF4-204ENST00000422344 KRTAP10-12P60413 245 aa8.72□□□□□ -1.01
TRAF4-204ENST00000422344 CAMK2N1Q7Z7J9 78 aa8.71□□□□□ -1.02
TRAF4-204ENST00000422344 CYSTM1Q9H1C7 97 aa8.69□□□□□ -1.02
TRAF4-204ENST00000422344 ANAPC13Q9BS18 74 aa8.64□□□□□ -1.03
TRAF4-204ENST00000422344 A0A0D9SG42 100 aa8.6□□□□□ -1.03
TRAF4-204ENST00000422344 A0A1B0GU33 70 aa8.58□□□□□ -1.04
TRAF4-204ENST00000422344 LCE3BQ5TA77 95 aa8.58□□□□□ -1.04
TRAF4-204ENST00000422344 SPATA8Q6RVD6 105 aa8.56□□□□□ -1.04
TRAF4-204ENST00000422344 A0A1B0GU69 56 aa8.48□□□□□ -1.05
TRAF4-204ENST00000422344 SPINT4Q6UDR6 99 aa8.48□□□□□ -1.05
TRAF4-204ENST00000422344 CCDC179H3BU77 68 aa8.42□□□□□ -1.06
TRAF4-204ENST00000422344 KRTAP12-1P59990 96 aa8.37□□□□□ -1.07
TRAF4-204ENST00000422344 SMIM26A0A096LP01 95 aa8.36□□□□□ -1.07
TRAF4-204ENST00000422344 ATP5EP56381 51 aaPredicted RBP8.36□□□□□ -1.07
TRAF4-204ENST00000422344 GPR98Q8WXG9 6306 aa8.36□□□□□ -1.07
TRAF4-204ENST00000422344 PRR15LQ9BU68 103 aa8.28□□□□□ -1.08
TRAF4-204ENST00000422344 DSTQ03001 7570 aaKnown RBP8.26□□□□□ -1.09
TRAF4-204ENST00000422344 A8MU10 97 aa8.25□□□□□ -1.09
TRAF4-204ENST00000422344 KRTAP19-7Q3SYF9 63 aa8.19□□□□□ -1.1
TRAF4-204ENST00000422344 KRTAP4-9Q9BYQ8 210 aa8.15□□□□□ -1.1
TRAF4-204ENST00000422344 MT1EP04732 61 aa8.14□□□□□ -1.11
TRAF4-204ENST00000422344 TMEM258P61165 79 aa8.14□□□□□ -1.11
TRAF4-204ENST00000422344 LINC01558Q9Y6Z2 57 aa8.13□□□□□ -1.11
TRAF4-204ENST00000422344 KRTAP19-3Q7Z4W3 81 aa8.08□□□□□ -1.12
TRAF4-204ENST00000422344 LCE5AQ5TCM9 118 aa8.06□□□□□ -1.12
TRAF4-204ENST00000422344 KRTAP19-5Q3LI72 72 aa8.04□□□□□ -1.12
TRAF4-204ENST00000422344 TNP1P09430 55 aa8.01□□□□□ -1.13
TRAF4-204ENST00000422344 C10orf95Q9H7T3 257 aa7.99□□□□□ -1.13
TRAF4-204ENST00000422344 UQCR11O14957 56 aa7.96□□□□□ -1.14
TRAF4-204ENST00000422344 MT1GP13640 62 aa7.9□□□□□ -1.14
TRAF4-204ENST00000422344 LCE3AQ5TA76 89 aa7.9□□□□□ -1.14
TRAF4-204ENST00000422344 LCE1DQ5T752 114 aa7.88□□□□□ -1.15
TRAF4-204ENST00000422344 PP632Q6XCG6 107 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms