RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 GTF2H5Q6ZYL4 71 aa3.39□□□□□ -1.87
HMGN1-205ENST00000419378 UBL5Q9BZL1 73 aa3.39□□□□□ -1.87
HMGN1-205ENST00000419378 MT2AP02795 61 aa3.38□□□□□ -1.87
HMGN1-205ENST00000419378 CASC2Q6XLA1 102 aa3.38□□□□□ -1.87
HMGN1-205ENST00000419378 HCG22E2RYF7 251 aa3.36□□□□□ -1.87
HMGN1-205ENST00000419378 F8W1H4 67 aa3.36□□□□□ -1.87
HMGN1-205ENST00000419378 MT1FP04733 61 aa3.36□□□□□ -1.87
HMGN1-205ENST00000419378 ETDBQ3ZM63 59 aa3.36□□□□□ -1.87
HMGN1-205ENST00000419378 Q5W150 140 aa3.36□□□□□ -1.87
HMGN1-205ENST00000419378 LCE3EQ5T5B0 92 aa3.35□□□□□ -1.87
HMGN1-205ENST00000419378 C7orf65Q6ZTY9 151 aa3.35□□□□□ -1.87
HMGN1-205ENST00000419378 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.87
HMGN1-205ENST00000419378 SSPOA2VEC9 5147 aa3.34□□□□□ -1.87
HMGN1-205ENST00000419378 USH2AO75445 5202 aa3.33□□□□□ -1.88
HMGN1-205ENST00000419378 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
HMGN1-205ENST00000419378 KRTAP10-10P60014 251 aa3.32□□□□□ -1.88
HMGN1-205ENST00000419378 H1FX-AS1Q4G0G2 97 aa3.31□□□□□ -1.88
HMGN1-205ENST00000419378 C4orf26Q17RF5 130 aa3.29□□□□□ -1.88
HMGN1-205ENST00000419378 TP53AIP1Q9HCN2 124 aa3.28□□□□□ -1.88
HMGN1-205ENST00000419378 FAM240AA0A1B0GVK7 77 aa3.27□□□□□ -1.89
HMGN1-205ENST00000419378 ACYP1P07311 99 aa3.27□□□□□ -1.89
HMGN1-205ENST00000419378 KRTAP12-2P59991 146 aa3.27□□□□□ -1.89
HMGN1-205ENST00000419378 KRTAP5-9P26371 169 aa3.26□□□□□ -1.89
HMGN1-205ENST00000419378 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
HMGN1-205ENST00000419378 ATP5EP2Q5VTU8 51 aa3.25□□□□□ -1.89
HMGN1-205ENST00000419378 HIST1H4AP62805 103 aaKnown RBP3.23□□□□□ -1.89
HMGN1-205ENST00000419378 C1orf64Q8NEQ6 169 aa3.23□□□□□ -1.89
HMGN1-205ENST00000419378 MACF1Q9UPN3 7388 aaKnown RBP3.22□□□□□ -1.89
HMGN1-205ENST00000419378 TRAV22A0A0B4J277 110 aa3.22□□□□□ -1.89
HMGN1-205ENST00000419378 A0A1B0GV90 55 aa3.22□□□□□ -1.89
HMGN1-205ENST00000419378 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
HMGN1-205ENST00000419378 FCGBPQ9Y6R7 5405 aaPredicted RBP3.22□□□□□ -1.89
HMGN1-205ENST00000419378 C5orf47Q569G3 176 aa3.21□□□□□ -1.9
HMGN1-205ENST00000419378 CAMK2N1Q7Z7J9 78 aa3.21□□□□□ -1.9
HMGN1-205ENST00000419378 CYP4F30PQ9H0H9 118 aa3.21□□□□□ -1.9
HMGN1-205ENST00000419378 S4R3F8 94 aa3.21□□□□□ -1.9
HMGN1-205ENST00000419378 LOC101927531A0A1B0GV80 90 aa3.2□□□□□ -1.9
HMGN1-205ENST00000419378 LCA10Q71F78 164 aa3.2□□□□□ -1.9
HMGN1-205ENST00000419378 LINC00643Q86TS7 51 aa3.2□□□□□ -1.9
HMGN1-205ENST00000419378 SYNE2Q8WXH0 6885 aaKnown RBP3.2□□□□□ -1.9
HMGN1-205ENST00000419378 A0A087WVE0 104 aa3.19□□□□□ -1.9
HMGN1-205ENST00000419378 UQCRQO14949 82 aa3.18□□□□□ -1.9
HMGN1-205ENST00000419378 CSAG1Q6PB30 78 aa3.18□□□□□ -1.9
HMGN1-205ENST00000419378 H0Y9P7 68 aa3.17□□□□□ -1.9
HMGN1-205ENST00000419378 ATOX1O00244 68 aa3.17□□□□□ -1.9
HMGN1-205ENST00000419378 KRTAP19-6Q3LI70 58 aa3.17□□□□□ -1.9
HMGN1-205ENST00000419378 FAM236AA0A1B0GUQ0 79 aa3.15□□□□□ -1.91
HMGN1-205ENST00000419378 FAM236BA0A1B0GV22 79 aa3.15□□□□□ -1.91
HMGN1-205ENST00000419378 K7ERU9 68 aa3.14□□□□□ -1.91
HMGN1-205ENST00000419378 J3QR89 54 aa3.13□□□□□ -1.91
HMGN1-205ENST00000419378 LINC00208Q96KT6 92 aa3.12□□□□□ -1.91
HMGN1-205ENST00000419378 MP68P56378 58 aa3.11□□□□□ -1.91
HMGN1-205ENST00000419378 KLKP1Q107X0 134 aa3.11□□□□□ -1.91
HMGN1-205ENST00000419378 SPRR2GQ9BYE4 73 aa3.1□□□□□ -1.91
HMGN1-205ENST00000419378 A8MUN3 132 aa3.09□□□□□ -1.91
HMGN1-205ENST00000419378 NDUFC1O43677 76 aa3.09□□□□□ -1.91
HMGN1-205ENST00000419378 SCGB1A1P11684 91 aa3.09□□□□□ -1.91
HMGN1-205ENST00000419378 MT1BP07438 61 aa3.08□□□□□ -1.92
HMGN1-205ENST00000419378 KRTAP19-8Q3LI54 63 aa3.08□□□□□ -1.92
HMGN1-205ENST00000419378 H3BPC8 53 aa3.07□□□□□ -1.92
HMGN1-205ENST00000419378 Q5VV11 94 aa3.07□□□□□ -1.92
HMGN1-205ENST00000419378 IMUPQ9GZP8 106 aa3.07□□□□□ -1.92
HMGN1-205ENST00000419378 CRIPTQ9P021 101 aa3.06□□□□□ -1.92
HMGN1-205ENST00000419378 H0YAA0 97 aa3.05□□□□□ -1.92
HMGN1-205ENST00000419378 MT-ATP8P03928 68 aa3.04□□□□□ -1.92
HMGN1-205ENST00000419378 A6NN06 94 aa3.03□□□□□ -1.92
HMGN1-205ENST00000419378 DMAC1Q96GE9 116 aa3.03□□□□□ -1.92
HMGN1-205ENST00000419378 ADM2Q7Z4H4 148 aa3.02□□□□□ -1.93
HMGN1-205ENST00000419378 NEBP20929 6669 aa3.01□□□□□ -1.93
HMGN1-205ENST00000419378 OBSCNQ5VST9 7968 aa3□□□□□ -1.93
HMGN1-205ENST00000419378 TRAV7A0A075B6U4 112 aa2.99□□□□□ -1.93
HMGN1-205ENST00000419378 SMIM20Q8N5G0 67 aa2.99□□□□□ -1.93
HMGN1-205ENST00000419378 KRTAP6-3Q3LI67 103 aa2.98□□□□□ -1.93
HMGN1-205ENST00000419378 P0C880 135 aa2.96□□□□□ -1.94
HMGN1-205ENST00000419378 C20orf197Q8N268 126 aa2.95□□□□□ -1.94
HMGN1-205ENST00000419378 R4GN34 69 aa2.94□□□□□ -1.94
HMGN1-205ENST00000419378 M0QZ58 72 aa2.93□□□□□ -1.94
HMGN1-205ENST00000419378 ACYP2P14621 99 aa2.93□□□□□ -1.94
HMGN1-205ENST00000419378 SNURFQ9Y675 71 aa2.93□□□□□ -1.94
HMGN1-205ENST00000419378 MUC12Q9UKN1 5478 aa2.92□□□□□ -1.94
HMGN1-205ENST00000419378 MT1XP80297 61 aa2.9□□□□□ -1.95
HMGN1-205ENST00000419378 SERP2Q8N6R1 65 aa2.9□□□□□ -1.95
HMGN1-205ENST00000419378 SPTSSBQ8NFR3 76 aa2.9□□□□□ -1.95
HMGN1-205ENST00000419378 PLAC4Q8WY50 150 aa2.9□□□□□ -1.95
HMGN1-205ENST00000419378 PRO2289Q9P1D8 64 aa2.9□□□□□ -1.95
HMGN1-205ENST00000419378 CHKB-CPT1BH3BT56 60 aa2.89□□□□□ -1.95
HMGN1-205ENST00000419378 SMIM26A0A096LP01 95 aa2.88□□□□□ -1.95
HMGN1-205ENST00000419378 LINC01554Q52M75 96 aa2.88□□□□□ -1.95
HMGN1-205ENST00000419378 SPANXA2-OT1Q8N9U9 137 aa2.88□□□□□ -1.95
HMGN1-205ENST00000419378 ANAPC13Q9BS18 74 aa2.88□□□□□ -1.95
HMGN1-205ENST00000419378 KMT2DO14686 5537 aa2.87□□□□□ -1.95
HMGN1-205ENST00000419378 LCE3AQ5TA76 89 aa2.84□□□□□ -1.95
HMGN1-205ENST00000419378 RPS28P62857 69 aaKnown RBP2.83□□□□□ -1.96
HMGN1-205ENST00000419378 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
HMGN1-205ENST00000419378 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
HMGN1-205ENST00000419378 MDN1Q9NU22 5596 aa2.83□□□□□ -1.96
HMGN1-205ENST00000419378 COX7CP15954 63 aa2.82□□□□□ -1.96
HMGN1-205ENST00000419378 COA5Q86WW8 74 aa2.81□□□□□ -1.96
HMGN1-205ENST00000419378 SPRR2FQ96RM1 72 aa2.79□□□□□ -1.96
HMGN1-205ENST00000419378 CYSTM1Q9H1C7 97 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms