RNA–Protein interactions for RNA: ENST00000419169.5

SMG7-204, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2

Gene SMG7, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-204ENST00000419169 KRTAP25-1Q3LHN0 102 aa9□□□□□ -0.97
SMG7-204ENST00000419169 KRTAP3-3Q9BYR6 98 aa8.99□□□□□ -0.97
SMG7-204ENST00000419169 K7ERS5 55 aa8.99□□□□□ -0.97
SMG7-204ENST00000419169 RPL37P61927 97 aaKnown RBP8.98□□□□□ -0.97
SMG7-204ENST00000419169 EPPK1P58107 5090 aaKnown RBP8.97□□□□□ -0.97
SMG7-204ENST00000419169 KRTAP10-6P60371 365 aaPredicted RBP8.96□□□□□ -0.98
SMG7-204ENST00000419169 Q5VSD8 79 aa8.94□□□□□ -0.98
SMG7-204ENST00000419169 HSPG2P98160 4391 aa8.94□□□□□ -0.98
SMG7-204ENST00000419169 DMBT1Q9UGM3 2413 aaPredicted RBP8.93□□□□□ -0.98
SMG7-204ENST00000419169 XP32Q5T750 250 aa8.93□□□□□ -0.98
SMG7-204ENST00000419169 MYCBP2O75592 4640 aa8.91□□□□□ -0.98
SMG7-204ENST00000419169 KRTAP3-2Q9BYR7 98 aa8.88□□□□□ -0.99
SMG7-204ENST00000419169 S4R3F8 94 aa8.88□□□□□ -0.99
SMG7-204ENST00000419169 KRTAP13-4Q3LI77 160 aa8.88□□□□□ -0.99
SMG7-204ENST00000419169 KRTAP17-1Q9BYP8 105 aa8.88□□□□□ -0.99
SMG7-204ENST00000419169 RYR1P21817 5038 aa8.85□□□□□ -0.99
SMG7-204ENST00000419169 CRIPTQ9P021 101 aa8.84□□□□□ -0.99
SMG7-204ENST00000419169 ROMO1P60602 79 aa8.81□□□□□ -1
SMG7-204ENST00000419169 A0A0D9SG42 100 aa8.81□□□□□ -1
SMG7-204ENST00000419169 KIAA1109Q2LD37 5005 aa8.78□□□□□ -1
SMG7-204ENST00000419169 P0C880 135 aa8.76□□□□□ -1.01
SMG7-204ENST00000419169 BIRC6Q9NR09 4857 aa8.76□□□□□ -1.01
SMG7-204ENST00000419169 LPAP08519 4548 aa8.7□□□□□ -1.02
SMG7-204ENST00000419169 MT1HL1P0DM35 61 aa8.7□□□□□ -1.02
SMG7-204ENST00000419169 KRTAP12-2P59991 146 aa8.6□□□□□ -1.03
SMG7-204ENST00000419169 TPRXLQ17RH7 258 aa8.6□□□□□ -1.03
SMG7-204ENST00000419169 LRP2P98164 4655 aa8.57□□□□□ -1.04
SMG7-204ENST00000419169 HERC2O95714 4834 aa8.56□□□□□ -1.04
SMG7-204ENST00000419169 H3BS24 57 aa8.55□□□□□ -1.04
SMG7-204ENST00000419169 KRTAP12-1P59990 96 aa8.53□□□□□ -1.04
SMG7-204ENST00000419169 C10orf95Q9H7T3 257 aa8.52□□□□□ -1.05
SMG7-204ENST00000419169 SPINT4Q6UDR6 99 aa8.51□□□□□ -1.05
SMG7-204ENST00000419169 KRTAP4-5Q9BYR2 181 aa8.49□□□□□ -1.05
SMG7-204ENST00000419169 M0QZ58 72 aa8.47□□□□□ -1.05
SMG7-204ENST00000419169 ABCA13Q86UQ4 5058 aa8.46□□□□□ -1.05
SMG7-204ENST00000419169 PCLOQ9Y6V0 5065 aa8.33□□□□□ -1.08
SMG7-204ENST00000419169 R4GN34 69 aa8.25□□□□□ -1.09
SMG7-204ENST00000419169 KRTAP15-1Q3LI76 137 aa8.23□□□□□ -1.09
SMG7-204ENST00000419169 SEC61BP60468 96 aaKnown RBP8.2□□□□□ -1.1
SMG7-204ENST00000419169 KRTAP4-1Q9BYQ7 146 aa8.18□□□□□ -1.1
SMG7-204ENST00000419169 J3QL48 77 aa8.17□□□□□ -1.1
SMG7-204ENST00000419169 LORP23490 312 aaPredicted RBP8.15□□□□□ -1.1
SMG7-204ENST00000419169 MUC17Q685J3 4493 aa8.14□□□□□ -1.11
SMG7-204ENST00000419169 NDUFAF8A1L188 74 aa8.05□□□□□ -1.12
SMG7-204ENST00000419169 HERC1Q15751 4861 aa8.04□□□□□ -1.12
SMG7-204ENST00000419169 KRTAP19-2Q3LHN2 52 aa8□□□□□ -1.13
SMG7-204ENST00000419169 MUC2Q02817 5179 aa7.98□□□□□ -1.13
SMG7-204ENST00000419169 CAMK2N1Q7Z7J9 78 aa7.84□□□□□ -1.15
SMG7-204ENST00000419169 PLAC4Q8WY50 150 aa7.83□□□□□ -1.16
SMG7-204ENST00000419169 FLGP20930 4061 aaPredicted RBP7.78□□□□□ -1.16
SMG7-204ENST00000419169 HMCN2Q8NDA2 5059 aa7.77□□□□□ -1.16
SMG7-204ENST00000419169 PP632Q6XCG6 107 aa7.77□□□□□ -1.17
SMG7-204ENST00000419169 TNP1P09430 55 aa7.56□□□□□ -1.2
SMG7-204ENST00000419169 FAT4Q6V0I7 4981 aa7.55□□□□□ -1.2
SMG7-204ENST00000419169 UBR4Q5T4S7 5183 aa7.54□□□□□ -1.2
SMG7-204ENST00000419169 KRTAP23-1A1A580 65 aa7.49□□□□□ -1.21
SMG7-204ENST00000419169 LCE2CQ5TA81 110 aa7.49□□□□□ -1.21
SMG7-204ENST00000419169 LUZP6Q538Z0 58 aa7.48□□□□□ -1.21
SMG7-204ENST00000419169 SPRR2GQ9BYE4 73 aa7.41□□□□□ -1.22
SMG7-204ENST00000419169 M0R2T5 61 aa7.37□□□□□ -1.23
SMG7-204ENST00000419169 KRTAP19-1Q8IUB9 90 aa7.37□□□□□ -1.23
SMG7-204ENST00000419169 RNF213Q63HN8 5207 aa7.37□□□□□ -1.23
SMG7-204ENST00000419169 SPRR5A0A1B0GTR4 108 aa7.29□□□□□ -1.24
SMG7-204ENST00000419169 MT1HP80294 61 aa7.28□□□□□ -1.24
SMG7-204ENST00000419169 LCE2DQ5TA82 110 aaPredicted RBP7.25□□□□□ -1.25
SMG7-204ENST00000419169 MT1FP04733 61 aa7.2□□□□□ -1.26
SMG7-204ENST00000419169 KRTAP10-10P60014 251 aa7.2□□□□□ -1.26
SMG7-204ENST00000419169 MT2AP02795 61 aa7.18□□□□□ -1.26
SMG7-204ENST00000419169 A0A0A0MQY5 61 aa7.16□□□□□ -1.26
SMG7-204ENST00000419169 LCE3AQ5TA76 89 aa7.16□□□□□ -1.26
SMG7-204ENST00000419169 KRTAP9-8Q9BYQ0 159 aa7.12□□□□□ -1.27
SMG7-204ENST00000419169 KRTAP19-8Q3LI54 63 aa7.06□□□□□ -1.28
SMG7-204ENST00000419169 KRTAP8-1Q8IUC2 63 aa6.99□□□□□ -1.29
SMG7-204ENST00000419169 MT1BP07438 61 aa6.97□□□□□ -1.29
SMG7-204ENST00000419169 KRTAP10-5P60370 271 aa6.96□□□□□ -1.29
SMG7-204ENST00000419169 MT1XP80297 61 aa6.95□□□□□ -1.3
SMG7-204ENST00000419169 LCE2AQ5TA79 106 aaPredicted RBP6.92□□□□□ -1.3
SMG7-204ENST00000419169 KRTAP10-12P60413 245 aa6.85□□□□□ -1.31
SMG7-204ENST00000419169 KRTAP12-3P60328 96 aa6.82□□□□□ -1.32
SMG7-204ENST00000419169 KRTAP9-3Q9BYQ3 159 aa6.8□□□□□ -1.32
SMG7-204ENST00000419169 KRTAP10-7P60409 375 aaPredicted RBP6.77□□□□□ -1.33
SMG7-204ENST00000419169 PRO2289Q9P1D8 64 aa6.66□□□□□ -1.34
SMG7-204ENST00000419169 USH2AO75445 5202 aa6.61□□□□□ -1.35
SMG7-204ENST00000419169 LCE2BO14633 110 aa6.57□□□□□ -1.36
SMG7-204ENST00000419169 KMT2DO14686 5537 aa6.51□□□□□ -1.37
SMG7-204ENST00000419169 KRTAP19-5Q3LI72 72 aa6.5□□□□□ -1.37
SMG7-204ENST00000419169 INE1O15225 51 aa6.48□□□□□ -1.37
SMG7-204ENST00000419169 KRTAP9-2Q9BYQ4 174 aa6.44□□□□□ -1.38
SMG7-204ENST00000419169 LCE3CQ5T5A8 94 aa6.42□□□□□ -1.38
SMG7-204ENST00000419169 KRTAP4-8A0A0G2JLE6 195 aa6.39□□□□□ -1.39
SMG7-204ENST00000419169 KRTAP4-8Q9BYQ9 185 aa6.39□□□□□ -1.39
SMG7-204ENST00000419169 FSIP2Q5CZC0 6907 aa6.31□□□□□ -1.4
SMG7-204ENST00000419169 KRTAP9-6A8MVA2 160 aa6.21□□□□□ -1.42
SMG7-204ENST00000419169 KRTAP19-7Q3SYF9 63 aa6.19□□□□□ -1.42
SMG7-204ENST00000419169 KRTAP4-7Q9BYR0 210 aa6.16□□□□□ -1.42
SMG7-204ENST00000419169 CRCT1Q9UGL9 99 aa6.13□□□□□ -1.43
SMG7-204ENST00000419169 KRTAP9-6A0A140TA67 174 aa6.1□□□□□ -1.43
SMG7-204ENST00000419169 SSPOA2VEC9 5147 aa6.08□□□□□ -1.44
SMG7-204ENST00000419169 KRTAP19-4Q3LI73 84 aa6.03□□□□□ -1.44
SMG7-204ENST00000419169 KRTAP2-3P0C7H8 128 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms