RNA–Protein interactions for RNA: ENST00000416957.5

FNDC3B-203, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 3,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-203ENST00000416957 SPINK6Q6UWN8 80 aa4.58□□□□□ -1.68
FNDC3B-203ENST00000416957 HSPG2P98160 4391 aa4.58□□□□□ -1.68
FNDC3B-203ENST00000416957 KRTAP13-1Q8IUC0 172 aa4.58□□□□□ -1.68
FNDC3B-203ENST00000416957 SPINK1P00995 79 aa4.57□□□□□ -1.68
FNDC3B-203ENST00000416957 HERC2O95714 4834 aa4.57□□□□□ -1.68
FNDC3B-203ENST00000416957 PRLHP81277 87 aa4.56□□□□□ -1.68
FNDC3B-203ENST00000416957 H1FX-AS1Q4G0G2 97 aa4.56□□□□□ -1.68
FNDC3B-203ENST00000416957 SMR3BP02814 79 aaPredicted RBP4.55□□□□□ -1.68
FNDC3B-203ENST00000416957 PLAC4Q8WY50 150 aa4.54□□□□□ -1.68
FNDC3B-203ENST00000416957 KRTAP13-3Q3SY46 172 aa4.53□□□□□ -1.68
FNDC3B-203ENST00000416957 KRTAP17-1Q9BYP8 105 aa4.5□□□□□ -1.69
FNDC3B-203ENST00000416957 KIAA1109Q2LD37 5005 aa4.5□□□□□ -1.69
FNDC3B-203ENST00000416957 SPRR1BP22528 89 aa4.49□□□□□ -1.69
FNDC3B-203ENST00000416957 RPL37P61927 97 aaKnown RBP4.48□□□□□ -1.69
FNDC3B-203ENST00000416957 KRTAP1-4P0C5Y4 121 aa4.46□□□□□ -1.7
FNDC3B-203ENST00000416957 IGKV2-30P06310 120 aa4.44□□□□□ -1.7
FNDC3B-203ENST00000416957 KRTAP4-5Q9BYR2 181 aa4.44□□□□□ -1.7
FNDC3B-203ENST00000416957 FAT1Q14517 4588 aa4.44□□□□□ -1.7
FNDC3B-203ENST00000416957 SRRM2Q9UQ35 2752 aaKnown RBP4.43□□□□□ -1.7
FNDC3B-203ENST00000416957 KRTAP10-8P60410 259 aa4.42□□□□□ -1.7
FNDC3B-203ENST00000416957 IGKV2D-30A0A075B6S6 120 aa4.41□□□□□ -1.7
FNDC3B-203ENST00000416957 FAT3Q8TDW7 4589 aa4.4□□□□□ -1.71
FNDC3B-203ENST00000416957 RPS29P62273 56 aaKnown RBP4.4□□□□□ -1.71
FNDC3B-203ENST00000416957 COX6B2Q6YFQ2 88 aa4.4□□□□□ -1.71
FNDC3B-203ENST00000416957 MT1HL1P0DM35 61 aa4.39□□□□□ -1.71
FNDC3B-203ENST00000416957 KRTAP13-2Q52LG2 175 aa4.38□□□□□ -1.71
FNDC3B-203ENST00000416957 ABCA13Q86UQ4 5058 aa4.37□□□□□ -1.71
FNDC3B-203ENST00000416957 XP32Q5T750 250 aa4.34□□□□□ -1.71
FNDC3B-203ENST00000416957 TNXBP22105 4242 aa4.33□□□□□ -1.72
FNDC3B-203ENST00000416957 MYCBP2O75592 4640 aa4.32□□□□□ -1.72
FNDC3B-203ENST00000416957 INE1O15225 51 aa4.32□□□□□ -1.72
FNDC3B-203ENST00000416957 PCLOQ9Y6V0 5065 aa4.31□□□□□ -1.72
FNDC3B-203ENST00000416957 A0A0D9SG42 100 aa4.31□□□□□ -1.72
FNDC3B-203ENST00000416957 DMBT1Q9UGM3 2413 aaPredicted RBP4.28□□□□□ -1.72
FNDC3B-203ENST00000416957 LRP1Q07954 4544 aaKnown RBP4.26□□□□□ -1.73
FNDC3B-203ENST00000416957 KRTAP3-2Q9BYR7 98 aa4.23□□□□□ -1.73
FNDC3B-203ENST00000416957 S4R3F8 94 aa4.23□□□□□ -1.73
FNDC3B-203ENST00000416957 KRTAP12-2P59991 146 aa4.15□□□□□ -1.75
FNDC3B-203ENST00000416957 KRTAP3-3Q9BYR6 98 aa4.14□□□□□ -1.75
FNDC3B-203ENST00000416957 KRTAP13-4Q3LI77 160 aa4.13□□□□□ -1.75
FNDC3B-203ENST00000416957 HMCN2Q8NDA2 5059 aa4.11□□□□□ -1.75
FNDC3B-203ENST00000416957 MUC17Q685J3 4493 aa4.09□□□□□ -1.75
FNDC3B-203ENST00000416957 HERC1Q15751 4861 aa4.07□□□□□ -1.76
FNDC3B-203ENST00000416957 PP632Q6XCG6 107 aa4.07□□□□□ -1.76
FNDC3B-203ENST00000416957 KRTAP3-1Q9BYR8 98 aa4.03□□□□□ -1.76
FNDC3B-203ENST00000416957 C9orf92A6NGG3 77 aa4.02□□□□□ -1.77
FNDC3B-203ENST00000416957 KRTAP10-6P60371 365 aaPredicted RBP4.02□□□□□ -1.77
FNDC3B-203ENST00000416957 KRTAP12-1P59990 96 aa4.01□□□□□ -1.77
FNDC3B-203ENST00000416957 LPAP08519 4548 aa3.95□□□□□ -1.78
FNDC3B-203ENST00000416957 LCE2AQ5TA79 106 aaPredicted RBP3.93□□□□□ -1.78
FNDC3B-203ENST00000416957 SPRR5A0A1B0GTR4 108 aa3.92□□□□□ -1.78
FNDC3B-203ENST00000416957 LCE2CQ5TA81 110 aa3.91□□□□□ -1.78
FNDC3B-203ENST00000416957 LRP2P98164 4655 aa3.9□□□□□ -1.79
FNDC3B-203ENST00000416957 KRTAP4-1Q9BYQ7 146 aa3.86□□□□□ -1.79
FNDC3B-203ENST00000416957 RNF213Q63HN8 5207 aa3.83□□□□□ -1.8
FNDC3B-203ENST00000416957 UBR4Q5T4S7 5183 aa3.82□□□□□ -1.8
FNDC3B-203ENST00000416957 KRTAP19-2Q3LHN2 52 aa3.8□□□□□ -1.8
FNDC3B-203ENST00000416957 LORP23490 312 aaPredicted RBP3.75□□□□□ -1.81
FNDC3B-203ENST00000416957 M0QZ58 72 aa3.74□□□□□ -1.81
FNDC3B-203ENST00000416957 LCE2DQ5TA82 110 aaPredicted RBP3.74□□□□□ -1.81
FNDC3B-203ENST00000416957 MT1HP80294 61 aa3.71□□□□□ -1.82
FNDC3B-203ENST00000416957 FAT4Q6V0I7 4981 aa3.68□□□□□ -1.82
FNDC3B-203ENST00000416957 FLGP20930 4061 aaPredicted RBP3.66□□□□□ -1.82
FNDC3B-203ENST00000416957 LCE2BO14633 110 aa3.62□□□□□ -1.83
FNDC3B-203ENST00000416957 MUC2Q02817 5179 aa3.62□□□□□ -1.83
FNDC3B-203ENST00000416957 M0R2T5 61 aa3.6□□□□□ -1.83
FNDC3B-203ENST00000416957 KRTAP9-8Q9BYQ0 159 aa3.54□□□□□ -1.84
FNDC3B-203ENST00000416957 MT2AP02795 61 aa3.51□□□□□ -1.85
FNDC3B-203ENST00000416957 KRTAP10-10P60014 251 aa3.47□□□□□ -1.85
FNDC3B-203ENST00000416957 MT1FP04733 61 aa3.47□□□□□ -1.85
FNDC3B-203ENST00000416957 KRTAP9-3Q9BYQ3 159 aa3.43□□□□□ -1.86
FNDC3B-203ENST00000416957 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
FNDC3B-203ENST00000416957 TNP1P09430 55 aa3.4□□□□□ -1.86
FNDC3B-203ENST00000416957 SPRR2GQ9BYE4 73 aa3.39□□□□□ -1.87
FNDC3B-203ENST00000416957 KRTAP9-2Q9BYQ4 174 aa3.39□□□□□ -1.87
FNDC3B-203ENST00000416957 KRTAP19-8Q3LI54 63 aa3.35□□□□□ -1.87
FNDC3B-203ENST00000416957 KRTAP19-1Q8IUB9 90 aa3.34□□□□□ -1.87
FNDC3B-203ENST00000416957 MT1BP07438 61 aa3.26□□□□□ -1.89
FNDC3B-203ENST00000416957 KRTAP19-6Q3LI70 58 aa3.25□□□□□ -1.89
FNDC3B-203ENST00000416957 CRCT1Q9UGL9 99 aa3.25□□□□□ -1.89
FNDC3B-203ENST00000416957 KRTAP9-6A0A140TA67 174 aa3.23□□□□□ -1.89
FNDC3B-203ENST00000416957 LCE1AQ5T7P2 110 aa3.22□□□□□ -1.89
FNDC3B-203ENST00000416957 USH2AO75445 5202 aa3.21□□□□□ -1.9
FNDC3B-203ENST00000416957 LCE5AQ5TCM9 118 aa3.2□□□□□ -1.9
FNDC3B-203ENST00000416957 KRTAP10-5P60370 271 aa3.18□□□□□ -1.9
FNDC3B-203ENST00000416957 SSPOA2VEC9 5147 aa3.17□□□□□ -1.9
FNDC3B-203ENST00000416957 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
FNDC3B-203ENST00000416957 KRTAP6-3Q3LI67 103 aa3.14□□□□□ -1.91
FNDC3B-203ENST00000416957 MT1XP80297 61 aa3.11□□□□□ -1.91
FNDC3B-203ENST00000416957 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
FNDC3B-203ENST00000416957 KRTAP10-12P60413 245 aa3.06□□□□□ -1.92
FNDC3B-203ENST00000416957 LCE3AQ5TA76 89 aa3.05□□□□□ -1.92
FNDC3B-203ENST00000416957 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.03□□□□□ -1.93
FNDC3B-203ENST00000416957 FCGBPQ9Y6R7 5405 aaPredicted RBP3.02□□□□□ -1.93
FNDC3B-203ENST00000416957 LCE1DQ5T752 114 aa3.01□□□□□ -1.93
FNDC3B-203ENST00000416957 KRTAP12-4P60329 112 aa3□□□□□ -1.93
FNDC3B-203ENST00000416957 FSIP2Q5CZC0 6907 aa2.98□□□□□ -1.93
FNDC3B-203ENST00000416957 KRTAP8-1Q8IUC2 63 aa2.95□□□□□ -1.94
FNDC3B-203ENST00000416957 KRTAP2-3P0C7H8 128 aa2.94□□□□□ -1.94
FNDC3B-203ENST00000416957 KRTAP2-4Q9BYR9 128 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms