RNA–Protein interactions for RNA: ENST00000415944.3

MECP2-204, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-204ENST00000415944 COX6B2Q6YFQ2 88 aa4.64□□□□□ -1.67
MECP2-204ENST00000415944 RPL37P61927 97 aaKnown RBP4.63□□□□□ -1.67
MECP2-204ENST00000415944 LRP2P98164 4655 aa4.62□□□□□ -1.67
MECP2-204ENST00000415944 PMAIP1Q13794 54 aa4.62□□□□□ -1.67
MECP2-204ENST00000415944 SPATA8Q6RVD6 105 aa4.61□□□□□ -1.67
MECP2-204ENST00000415944 LCA10Q71F78 164 aa4.6□□□□□ -1.67
MECP2-204ENST00000415944 TPRXLQ17RH7 258 aa4.59□□□□□ -1.67
MECP2-204ENST00000415944 LPAP08519 4548 aa4.58□□□□□ -1.68
MECP2-204ENST00000415944 MIR22HGQ0VDD5 57 aa4.57□□□□□ -1.68
MECP2-204ENST00000415944 XP32Q5T750 250 aa4.56□□□□□ -1.68
MECP2-204ENST00000415944 KTN1-AS1Q86SY8 53 aa4.54□□□□□ -1.68
MECP2-204ENST00000415944 A6NN06 94 aa4.51□□□□□ -1.69
MECP2-204ENST00000415944 RBM12B-AS1Q9P1G2 102 aa4.51□□□□□ -1.69
MECP2-204ENST00000415944 UBR4Q5T4S7 5183 aa4.49□□□□□ -1.69
MECP2-204ENST00000415944 K7ERS5 55 aa4.49□□□□□ -1.69
MECP2-204ENST00000415944 KRTAP3-1Q9BYR8 98 aa4.49□□□□□ -1.69
MECP2-204ENST00000415944 A0A1B0GU33 70 aa4.48□□□□□ -1.69
MECP2-204ENST00000415944 MUC17Q685J3 4493 aa4.47□□□□□ -1.69
MECP2-204ENST00000415944 H1FX-AS1Q4G0G2 97 aa4.47□□□□□ -1.69
MECP2-204ENST00000415944 LCE2DQ5TA82 110 aaPredicted RBP4.47□□□□□ -1.69
MECP2-204ENST00000415944 SEC61BP60468 96 aaKnown RBP4.46□□□□□ -1.7
MECP2-204ENST00000415944 S4R3F8 94 aa4.46□□□□□ -1.7
MECP2-204ENST00000415944 RNF213Q63HN8 5207 aa4.43□□□□□ -1.7
MECP2-204ENST00000415944 A8MU10 97 aa4.41□□□□□ -1.7
MECP2-204ENST00000415944 CSAG1Q6PB30 78 aa4.4□□□□□ -1.71
MECP2-204ENST00000415944 H0YAA0 97 aa4.39□□□□□ -1.71
MECP2-204ENST00000415944 M0QZ58 72 aa4.34□□□□□ -1.71
MECP2-204ENST00000415944 KRTAP4-1Q9BYQ7 146 aa4.34□□□□□ -1.71
MECP2-204ENST00000415944 KRTAP3-3Q9BYR6 98 aa4.34□□□□□ -1.71
MECP2-204ENST00000415944 MUC2Q02817 5179 aa4.32□□□□□ -1.72
MECP2-204ENST00000415944 KRTAP10-6P60371 365 aaPredicted RBP4.29□□□□□ -1.72
MECP2-204ENST00000415944 FAT4Q6V0I7 4981 aa4.28□□□□□ -1.72
MECP2-204ENST00000415944 KRTAP3-2Q9BYR7 98 aa4.26□□□□□ -1.73
MECP2-204ENST00000415944 KRTAP19-2Q3LHN2 52 aa4.23□□□□□ -1.73
MECP2-204ENST00000415944 ADM2Q7Z4H4 148 aa4.23□□□□□ -1.73
MECP2-204ENST00000415944 ROMO1P60602 79 aa4.2□□□□□ -1.74
MECP2-204ENST00000415944 LCE2CQ5TA81 110 aa4.19□□□□□ -1.74
MECP2-204ENST00000415944 FLGP20930 4061 aaPredicted RBP4.18□□□□□ -1.74
MECP2-204ENST00000415944 P0C880 135 aa4.16□□□□□ -1.74
MECP2-204ENST00000415944 LINC01554Q52M75 96 aa4.16□□□□□ -1.74
MECP2-204ENST00000415944 LCE2AQ5TA79 106 aaPredicted RBP4.16□□□□□ -1.74
MECP2-204ENST00000415944 CRIPTQ9P021 101 aa4.16□□□□□ -1.74
MECP2-204ENST00000415944 R4GN34 69 aa4.15□□□□□ -1.75
MECP2-204ENST00000415944 KRTAP25-1Q3LHN0 102 aa4.14□□□□□ -1.75
MECP2-204ENST00000415944 MT1HP80294 61 aa4.12□□□□□ -1.75
MECP2-204ENST00000415944 KRTAP13-4Q3LI77 160 aa4.11□□□□□ -1.75
MECP2-204ENST00000415944 PRAC1Q96KF2 57 aa4.11□□□□□ -1.75
MECP2-204ENST00000415944 A0A0D9SG42 100 aa4.1□□□□□ -1.75
MECP2-204ENST00000415944 KRTAP12-1P59990 96 aa4.08□□□□□ -1.76
MECP2-204ENST00000415944 SPINT4Q6UDR6 99 aa4.05□□□□□ -1.76
MECP2-204ENST00000415944 KRTAP12-2P59991 146 aa4.02□□□□□ -1.77
MECP2-204ENST00000415944 M0R2T5 61 aa4.01□□□□□ -1.77
MECP2-204ENST00000415944 LORP23490 312 aaPredicted RBP4.01□□□□□ -1.77
MECP2-204ENST00000415944 PP632Q6XCG6 107 aa3.96□□□□□ -1.78
MECP2-204ENST00000415944 KRTAP9-8Q9BYQ0 159 aa3.93□□□□□ -1.78
MECP2-204ENST00000415944 KRTAP23-1A1A580 65 aa3.92□□□□□ -1.78
MECP2-204ENST00000415944 CAMK2N1Q7Z7J9 78 aa3.91□□□□□ -1.78
MECP2-204ENST00000415944 MT2AP02795 61 aa3.9□□□□□ -1.79
MECP2-204ENST00000415944 MT1FP04733 61 aa3.87□□□□□ -1.79
MECP2-204ENST00000415944 SPRR2GQ9BYE4 73 aa3.85□□□□□ -1.79
MECP2-204ENST00000415944 KRTAP9-2Q9BYQ4 174 aa3.85□□□□□ -1.79
MECP2-204ENST00000415944 PLAC4Q8WY50 150 aa3.84□□□□□ -1.79
MECP2-204ENST00000415944 TNP1P09430 55 aa3.82□□□□□ -1.8
MECP2-204ENST00000415944 KRTAP10-10P60014 251 aa3.82□□□□□ -1.8
MECP2-204ENST00000415944 KRTAP9-3Q9BYQ3 159 aa3.81□□□□□ -1.8
MECP2-204ENST00000415944 C10orf95Q9H7T3 257 aa3.81□□□□□ -1.8
MECP2-204ENST00000415944 LCE2BO14633 110 aa3.74□□□□□ -1.81
MECP2-204ENST00000415944 USH2AO75445 5202 aa3.72□□□□□ -1.81
MECP2-204ENST00000415944 KRTAP19-8Q3LI54 63 aa3.71□□□□□ -1.82
MECP2-204ENST00000415944 KRTAP19-1Q8IUB9 90 aa3.71□□□□□ -1.82
MECP2-204ENST00000415944 KRTAP15-1Q3LI76 137 aa3.68□□□□□ -1.82
MECP2-204ENST00000415944 SSPOA2VEC9 5147 aa3.66□□□□□ -1.82
MECP2-204ENST00000415944 CRCT1Q9UGL9 99 aa3.66□□□□□ -1.82
MECP2-204ENST00000415944 FSIP2Q5CZC0 6907 aa3.65□□□□□ -1.82
MECP2-204ENST00000415944 KRTAP9-6A0A140TA67 174 aa3.65□□□□□ -1.83
MECP2-204ENST00000415944 PRO2289Q9P1D8 64 aa3.65□□□□□ -1.83
MECP2-204ENST00000415944 LOC100996750A0A140TA64 210 aa3.63□□□□□ -1.83
MECP2-204ENST00000415944 KRTAP4-6Q9BYQ5 205 aa3.63□□□□□ -1.83
MECP2-204ENST00000415944 MT1BP07438 61 aa3.61□□□□□ -1.83
MECP2-204ENST00000415944 LUZP6Q538Z0 58 aa3.6□□□□□ -1.83
MECP2-204ENST00000415944 KRTAP19-6Q3LI70 58 aa3.59□□□□□ -1.83
MECP2-204ENST00000415944 H3BS24 57 aa3.58□□□□□ -1.84
MECP2-204ENST00000415944 FCGBPQ9Y6R7 5405 aaPredicted RBP3.54□□□□□ -1.84
MECP2-204ENST00000415944 KRTAP8-1Q8IUC2 63 aa3.51□□□□□ -1.85
MECP2-204ENST00000415944 KRTAP19-4Q3LI73 84 aa3.49□□□□□ -1.85
MECP2-204ENST00000415944 KRTAP10-5P60370 271 aa3.48□□□□□ -1.85
MECP2-204ENST00000415944 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
MECP2-204ENST00000415944 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
MECP2-204ENST00000415944 MT1XP80297 61 aa3.47□□□□□ -1.85
MECP2-204ENST00000415944 KRTAP10-12P60413 245 aa3.46□□□□□ -1.86
MECP2-204ENST00000415944 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
MECP2-204ENST00000415944 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.42□□□□□ -1.86
MECP2-204ENST00000415944 KRTAP12-3P60328 96 aa3.38□□□□□ -1.87
MECP2-204ENST00000415944 MACF1Q9UPN3 7388 aaKnown RBP3.34□□□□□ -1.87
MECP2-204ENST00000415944 A0A0A0MQY5 61 aa3.34□□□□□ -1.87
MECP2-204ENST00000415944 KRTAP9-7A8MTY7 169 aa3.31□□□□□ -1.88
MECP2-204ENST00000415944 KRTAP10-7P60409 375 aaPredicted RBP3.29□□□□□ -1.88
MECP2-204ENST00000415944 KRTAP6-3Q3LI67 103 aa3.27□□□□□ -1.89
MECP2-204ENST00000415944 SYNE2Q8WXH0 6885 aaKnown RBP3.24□□□□□ -1.89
MECP2-204ENST00000415944 KMT2DO14686 5537 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms