RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 TTTY13Q9BZ97 58 aa2.16□□□□□ -2.06
LMBR1-204ENST00000415428 SCGB1D4Q6XE38 83 aa2.15□□□□□ -2.06
LMBR1-204ENST00000415428 HIST1H2BKO60814 126 aa2.15□□□□□ -2.07
LMBR1-204ENST00000415428 HIST1H2BJP06899 126 aa2.15□□□□□ -2.07
LMBR1-204ENST00000415428 HIST1H2BOP23527 126 aa2.15□□□□□ -2.07
LMBR1-204ENST00000415428 HIST1H2BBP33778 126 aa2.15□□□□□ -2.07
LMBR1-204ENST00000415428 HIST1H2BDP58876 126 aa2.15□□□□□ -2.07
LMBR1-204ENST00000415428 HIST1H2BCP62807 126 aa2.15□□□□□ -2.07
LMBR1-204ENST00000415428 HIST2H2BEQ16778 126 aa2.15□□□□□ -2.07
LMBR1-204ENST00000415428 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.15□□□□□ -2.07
LMBR1-204ENST00000415428 HIST1H2BHQ93079 126 aa2.15□□□□□ -2.07
LMBR1-204ENST00000415428 HIST1H2BNQ99877 126 aa2.15□□□□□ -2.07
LMBR1-204ENST00000415428 HIST1H2BMQ99879 126 aa2.15□□□□□ -2.07
LMBR1-204ENST00000415428 HIST1H2BLQ99880 126 aa2.15□□□□□ -2.07
LMBR1-204ENST00000415428 IGKV2D-30A0A075B6S6 120 aa2.15□□□□□ -2.07
LMBR1-204ENST00000415428 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.07
LMBR1-204ENST00000415428 C20orf197Q8N268 126 aa2.15□□□□□ -2.07
LMBR1-204ENST00000415428 V9GYY9 64 aa2.14□□□□□ -2.07
LMBR1-204ENST00000415428 JMJD7-PLA2G4BH0Y9G9 81 aa2.14□□□□□ -2.07
LMBR1-204ENST00000415428 TP53AIP1Q9HCN2 124 aa2.14□□□□□ -2.07
LMBR1-204ENST00000415428 PMCHL2Q9BQD1 86 aa2.13□□□□□ -2.07
LMBR1-204ENST00000415428 RBM3P98179 157 aaKnown RBP2.13□□□□□ -2.07
LMBR1-204ENST00000415428 PRO1854Q9UHT4 67 aa2.11□□□□□ -2.07
LMBR1-204ENST00000415428 NDUFA5Q16718 116 aa2.1□□□□□ -2.07
LMBR1-204ENST00000415428 HCG22E2RYF7 251 aa2.09□□□□□ -2.07
LMBR1-204ENST00000415428 CEND1Q8N111 149 aa2.09□□□□□ -2.08
LMBR1-204ENST00000415428 C10orf95Q9H7T3 257 aa2.08□□□□□ -2.08
LMBR1-204ENST00000415428 C9JAW5 83 aa2.07□□□□□ -2.08
LMBR1-204ENST00000415428 CYP4F30PQ9H0H9 118 aa2.06□□□□□ -2.08
LMBR1-204ENST00000415428 OCR1Q9BZK8 76 aa2.06□□□□□ -2.08
LMBR1-204ENST00000415428 DEFB116Q30KQ4 102 aa2.05□□□□□ -2.08
LMBR1-204ENST00000415428 KRTAP5-1Q6L8H4 278 aa2.05□□□□□ -2.08
LMBR1-204ENST00000415428 KRTAP12-4P60329 112 aa2.05□□□□□ -2.08
LMBR1-204ENST00000415428 KRTAP15-1Q3LI76 137 aa2.05□□□□□ -2.08
LMBR1-204ENST00000415428 LOC101927531A0A1B0GV80 90 aa2.04□□□□□ -2.08
LMBR1-204ENST00000415428 FABP2P12104 132 aa2.03□□□□□ -2.09
LMBR1-204ENST00000415428 ADM2Q7Z4H4 148 aa2.02□□□□□ -2.09
LMBR1-204ENST00000415428 KRTAP19-5Q3LI72 72 aa2.02□□□□□ -2.09
LMBR1-204ENST00000415428 FAM240AA0A1B0GVK7 77 aa2.01□□□□□ -2.09
LMBR1-204ENST00000415428 M0QZ58 72 aa2.01□□□□□ -2.09
LMBR1-204ENST00000415428 A0A087WVE0 104 aa2.01□□□□□ -2.09
LMBR1-204ENST00000415428 CASC2Q6XLA1 102 aa2.01□□□□□ -2.09
LMBR1-204ENST00000415428 NDUFC1O43677 76 aa2□□□□□ -2.09
LMBR1-204ENST00000415428 DNAL4O96015 105 aa2□□□□□ -2.09
LMBR1-204ENST00000415428 APOC3P02656 99 aa2□□□□□ -2.09
LMBR1-204ENST00000415428 ATOH7Q8N100 152 aa2□□□□□ -2.09
LMBR1-204ENST00000415428 COX6CP09669 75 aa1.98□□□□□ -2.09
LMBR1-204ENST00000415428 TRAV22A0A0B4J277 110 aa1.97□□□□□ -2.09
LMBR1-204ENST00000415428 TSTD3H0UI37 97 aa1.97□□□□□ -2.09
LMBR1-204ENST00000415428 SMIM26A0A096LP01 95 aa1.97□□□□□ -2.09
LMBR1-204ENST00000415428 HSD52Q0P140 79 aa1.97□□□□□ -2.09
LMBR1-204ENST00000415428 NREPQ16612 68 aa1.96□□□□□ -2.1
LMBR1-204ENST00000415428 KRTDAPP60985 99 aa1.96□□□□□ -2.1
LMBR1-204ENST00000415428 LCE3AQ5TA76 89 aa1.95□□□□□ -2.1
LMBR1-204ENST00000415428 P0C880 135 aa1.95□□□□□ -2.1
LMBR1-204ENST00000415428 R4GN34 69 aa1.95□□□□□ -2.1
LMBR1-204ENST00000415428 BAALC-AS2P0C853 105 aa1.94□□□□□ -2.1
LMBR1-204ENST00000415428 FXYD2P54710 66 aa1.94□□□□□ -2.1
LMBR1-204ENST00000415428 LCE1EQ5T753 118 aa1.94□□□□□ -2.1
LMBR1-204ENST00000415428 NDUFS5O43920 106 aa1.93□□□□□ -2.1
LMBR1-204ENST00000415428 MT1AP04731 61 aa1.93□□□□□ -2.1
LMBR1-204ENST00000415428 H3BT86 120 aa1.92□□□□□ -2.1
LMBR1-204ENST00000415428 ATOX1O00244 68 aa1.92□□□□□ -2.1
LMBR1-204ENST00000415428 VAMP8Q9BV40 100 aa1.92□□□□□ -2.1
LMBR1-204ENST00000415428 BPY2O14599 106 aa1.91□□□□□ -2.1
LMBR1-204ENST00000415428 LYRM7Q5U5X0 104 aa1.91□□□□□ -2.1
LMBR1-204ENST00000415428 ATXN8Q156A1 80 aa1.9□□□□□ -2.11
LMBR1-204ENST00000415428 LOC105371267A0A1B0GV96 52 aa1.9□□□□□ -2.11
LMBR1-204ENST00000415428 DMAC1Q96GE9 116 aa1.9□□□□□ -2.11
LMBR1-204ENST00000415428 KRTAP4-3Q9BYR4 195 aa1.9□□□□□ -2.11
LMBR1-204ENST00000415428 PSMB2P49721 201 aa1.89□□□□□ -2.11
LMBR1-204ENST00000415428 PRO0628Q9UI54 55 aa1.89□□□□□ -2.11
LMBR1-204ENST00000415428 PSPHP1O15172 72 aa1.89□□□□□ -2.11
LMBR1-204ENST00000415428 NDUFAF8A1L188 74 aa1.88□□□□□ -2.11
LMBR1-204ENST00000415428 UQCRQO14949 82 aa1.88□□□□□ -2.11
LMBR1-204ENST00000415428 ACYP1P07311 99 aa1.88□□□□□ -2.11
LMBR1-204ENST00000415428 TRAV7A0A075B6U4 112 aa1.87□□□□□ -2.11
LMBR1-204ENST00000415428 ANAPC13Q9BS18 74 aa1.87□□□□□ -2.11
LMBR1-204ENST00000415428 S100A2P29034 98 aa1.86□□□□□ -2.11
LMBR1-204ENST00000415428 DSTQ03001 7570 aaKnown RBP1.86□□□□□ -2.11
LMBR1-204ENST00000415428 H3BPC8 53 aa1.85□□□□□ -2.11
LMBR1-204ENST00000415428 SMIM20Q8N5G0 67 aa1.83□□□□□ -2.12
LMBR1-204ENST00000415428 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
LMBR1-204ENST00000415428 SCGB1C2P0DMR2 95 aa1.83□□□□□ -2.12
LMBR1-204ENST00000415428 MP68P56378 58 aa1.83□□□□□ -2.12
LMBR1-204ENST00000415428 CAMK2N1Q7Z7J9 78 aa1.83□□□□□ -2.12
LMBR1-204ENST00000415428 A0A1B0GV72 72 aa1.82□□□□□ -2.12
LMBR1-204ENST00000415428 PMAIP1Q13794 54 aa1.82□□□□□ -2.12
LMBR1-204ENST00000415428 SPATA45Q537H7 98 aa1.82□□□□□ -2.12
LMBR1-204ENST00000415428 C14orf132Q9NPU4 83 aa1.81□□□□□ -2.12
LMBR1-204ENST00000415428 LCE1FQ5T754 118 aa1.81□□□□□ -2.12
LMBR1-204ENST00000415428 LUZP6Q538Z0 58 aa1.79□□□□□ -2.12
LMBR1-204ENST00000415428 VPS25Q9BRG1 176 aa1.78□□□□□ -2.12
LMBR1-204ENST00000415428 A0A0D9SG42 100 aa1.78□□□□□ -2.12
LMBR1-204ENST00000415428 BATFQ16520 125 aa1.78□□□□□ -2.13
LMBR1-204ENST00000415428 K7ERJ3 54 aa1.77□□□□□ -2.13
LMBR1-204ENST00000415428 KRTAP6-1Q3LI64 71 aa1.76□□□□□ -2.13
LMBR1-204ENST00000415428 TAX1BP3O14907 124 aa1.75□□□□□ -2.13
LMBR1-204ENST00000415428 ATP5EP2Q5VTU8 51 aa1.75□□□□□ -2.13
LMBR1-204ENST00000415428 LCE1CQ5T751 118 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms