RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 IGKV3D-7A0A0C4DH55 119 aa2.5□□□□□ -2.01
VPS41-205ENST00000414632 A8MWP4 228 aa2.5□□□□□ -2.01
VPS41-205ENST00000414632 C8orf87E5RJ46 101 aa2.5□□□□□ -2.01
VPS41-205ENST00000414632 UQCRQO14949 82 aa2.5□□□□□ -2.01
VPS41-205ENST00000414632 COX7CP15954 63 aa2.5□□□□□ -2.01
VPS41-205ENST00000414632 PDE6GP18545 87 aa2.5□□□□□ -2.01
VPS41-205ENST00000414632 HIST1H4AP62805 103 aaKnown RBP2.5□□□□□ -2.01
VPS41-205ENST00000414632 NREPQ16612 68 aa2.5□□□□□ -2.01
VPS41-205ENST00000414632 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
VPS41-205ENST00000414632 PRO0628Q9UI54 55 aa2.5□□□□□ -2.01
VPS41-205ENST00000414632 FAM236DA0A1B0GTK5 79 aa2.49□□□□□ -2.01
VPS41-205ENST00000414632 NDUFB1O75438 58 aa2.49□□□□□ -2.01
VPS41-205ENST00000414632 FAM236CP0DP71 79 aa2.49□□□□□ -2.01
VPS41-205ENST00000414632 TMEM258P61165 79 aa2.49□□□□□ -2.01
VPS41-205ENST00000414632 Q8N9L7 120 aa2.49□□□□□ -2.01
VPS41-205ENST00000414632 A0A1B0GW54 56 aa2.48□□□□□ -2.01
VPS41-205ENST00000414632 K7EQZ3 153 aa2.48□□□□□ -2.01
VPS41-205ENST00000414632 M0R2T5 61 aa2.48□□□□□ -2.01
VPS41-205ENST00000414632 Q5W150 140 aa2.48□□□□□ -2.01
VPS41-205ENST00000414632 MMP24-AS1A0A0U1RRL7 71 aa2.47□□□□□ -2.01
VPS41-205ENST00000414632 LCE1EQ5T753 118 aa2.47□□□□□ -2.01
VPS41-205ENST00000414632 PRR15Q8IV56 129 aa2.47□□□□□ -2.01
VPS41-205ENST00000414632 ZCCHC13Q8WW36 166 aaKnown RBP2.47□□□□□ -2.01
VPS41-205ENST00000414632 HRES1P13985 223 aa2.46□□□□□ -2.02
VPS41-205ENST00000414632 WFDC13Q8IUB5 93 aa2.46□□□□□ -2.02
VPS41-205ENST00000414632 TMEM254Q8TBM7 123 aa2.45□□□□□ -2.02
VPS41-205ENST00000414632 MRPL34Q9BQ48 92 aaKnown RBP2.45□□□□□ -2.02
VPS41-205ENST00000414632 LINC00846Q9NV44 126 aa2.45□□□□□ -2.02
VPS41-205ENST00000414632 SYNE2Q8WXH0 6885 aaKnown RBP2.44□□□□□ -2.02
VPS41-205ENST00000414632 hDV103S1A0JD37 113 aa2.44□□□□□ -2.02
VPS41-205ENST00000414632 LUZP6Q538Z0 58 aa2.44□□□□□ -2.02
VPS41-205ENST00000414632 IMUPQ9GZP8 106 aa2.44□□□□□ -2.02
VPS41-205ENST00000414632 ATOX1O00244 68 aa2.43□□□□□ -2.02
VPS41-205ENST00000414632 SPINK7P58062 85 aa2.43□□□□□ -2.02
VPS41-205ENST00000414632 LINC00643Q86TS7 51 aa2.43□□□□□ -2.02
VPS41-205ENST00000414632 UBL5Q9BZL1 73 aa2.43□□□□□ -2.02
VPS41-205ENST00000414632 A0A087WVE0 104 aa2.42□□□□□ -2.02
VPS41-205ENST00000414632 HCG22E2RYF7 251 aa2.42□□□□□ -2.02
VPS41-205ENST00000414632 CASC2Q6XLA1 102 aa2.42□□□□□ -2.02
VPS41-205ENST00000414632 SERP2Q8N6R1 65 aa2.42□□□□□ -2.02
VPS41-205ENST00000414632 RBM12B-AS1Q9P1G2 102 aa2.42□□□□□ -2.02
VPS41-205ENST00000414632 SERP1Q9Y6X1 66 aa2.42□□□□□ -2.02
VPS41-205ENST00000414632 KRTAP10-5P60370 271 aa2.41□□□□□ -2.02
VPS41-205ENST00000414632 BRK1Q8WUW1 75 aa2.4□□□□□ -2.03
VPS41-205ENST00000414632 H7BZZ5 65 aa2.39□□□□□ -2.03
VPS41-205ENST00000414632 ACYP1P07311 99 aa2.39□□□□□ -2.03
VPS41-205ENST00000414632 C7orf65Q6ZTY9 151 aa2.37□□□□□ -2.03
VPS41-205ENST00000414632 C20orf197Q8N268 126 aa2.37□□□□□ -2.03
VPS41-205ENST00000414632 SPANXA2-OT1Q8N9U9 137 aa2.37□□□□□ -2.03
VPS41-205ENST00000414632 NEBP20929 6669 aa2.36□□□□□ -2.03
VPS41-205ENST00000414632 MT2AP02795 61 aa2.36□□□□□ -2.03
VPS41-205ENST00000414632 PMAIP1Q13794 54 aa2.36□□□□□ -2.03
VPS41-205ENST00000414632 MT1FP04733 61 aa2.34□□□□□ -2.03
VPS41-205ENST00000414632 H1FX-AS1Q4G0G2 97 aa2.34□□□□□ -2.03
VPS41-205ENST00000414632 KRTAP10-10P60014 251 aa2.33□□□□□ -2.04
VPS41-205ENST00000414632 KLKP1Q107X0 134 aa2.33□□□□□ -2.04
VPS41-205ENST00000414632 LCE3EQ5T5B0 92 aa2.33□□□□□ -2.04
VPS41-205ENST00000414632 SNURFQ9Y675 71 aa2.33□□□□□ -2.04
VPS41-205ENST00000414632 ATP5EP2Q5VTU8 51 aa2.32□□□□□ -2.04
VPS41-205ENST00000414632 TP53AIP1Q9HCN2 124 aa2.32□□□□□ -2.04
VPS41-205ENST00000414632 USH2AO75445 5202 aa2.31□□□□□ -2.04
VPS41-205ENST00000414632 TRAV7A0A075B6U4 112 aa2.31□□□□□ -2.04
VPS41-205ENST00000414632 ATP5EP56381 51 aaPredicted RBP2.31□□□□□ -2.04
VPS41-205ENST00000414632 SSPOA2VEC9 5147 aa2.3□□□□□ -2.04
VPS41-205ENST00000414632 TRAV22A0A0B4J277 110 aa2.3□□□□□ -2.04
VPS41-205ENST00000414632 H0Y9P7 68 aa2.3□□□□□ -2.04
VPS41-205ENST00000414632 MP68P56378 58 aa2.3□□□□□ -2.04
VPS41-205ENST00000414632 C1orf64Q8NEQ6 169 aa2.3□□□□□ -2.04
VPS41-205ENST00000414632 MACF1Q9UPN3 7388 aaKnown RBP2.3□□□□□ -2.04
VPS41-205ENST00000414632 K7ERS5 55 aa2.29□□□□□ -2.04
VPS41-205ENST00000414632 KRTAP12-2P59991 146 aa2.29□□□□□ -2.04
VPS41-205ENST00000414632 CYP4F30PQ9H0H9 118 aa2.29□□□□□ -2.04
VPS41-205ENST00000414632 S4R3F8 94 aa2.29□□□□□ -2.04
VPS41-205ENST00000414632 LCA10Q71F78 164 aa2.28□□□□□ -2.04
VPS41-205ENST00000414632 KTN1-AS1Q86SY8 53 aa2.28□□□□□ -2.04
VPS41-205ENST00000414632 LOC101927531A0A1B0GV80 90 aa2.27□□□□□ -2.05
VPS41-205ENST00000414632 GPR98Q8WXG9 6306 aa2.27□□□□□ -2.05
VPS41-205ENST00000414632 A6NN06 94 aa2.26□□□□□ -2.05
VPS41-205ENST00000414632 LINC00208Q96KT6 92 aa2.26□□□□□ -2.05
VPS41-205ENST00000414632 NDUFC1O43677 76 aa2.25□□□□□ -2.05
VPS41-205ENST00000414632 Q1T7F1 81 aa2.25□□□□□ -2.05
VPS41-205ENST00000414632 Q5VV11 94 aa2.25□□□□□ -2.05
VPS41-205ENST00000414632 A8MUN3 132 aa2.24□□□□□ -2.05
VPS41-205ENST00000414632 CSAG1Q6PB30 78 aa2.24□□□□□ -2.05
VPS41-205ENST00000414632 SPINT4Q6UDR6 99 aa2.23□□□□□ -2.05
VPS41-205ENST00000414632 ADM2Q7Z4H4 148 aa2.22□□□□□ -2.05
VPS41-205ENST00000414632 A6NED7 52 aa2.21□□□□□ -2.06
VPS41-205ENST00000414632 KRTAP9-6A8MVA2 160 aa2.21□□□□□ -2.06
VPS41-205ENST00000414632 OBSCNQ5VST9 7968 aa2.21□□□□□ -2.06
VPS41-205ENST00000414632 FCGBPQ9Y6R7 5405 aaPredicted RBP2.2□□□□□ -2.06
VPS41-205ENST00000414632 KRTAP5-2Q701N4 177 aa2.19□□□□□ -2.06
VPS41-205ENST00000414632 H3BPC8 53 aa2.18□□□□□ -2.06
VPS41-205ENST00000414632 SPTSSBQ8NFR3 76 aa2.18□□□□□ -2.06
VPS41-205ENST00000414632 PRR15LQ9BU68 103 aa2.18□□□□□ -2.06
VPS41-205ENST00000414632 CHKB-CPT1BH3BT56 60 aa2.17□□□□□ -2.06
VPS41-205ENST00000414632 KRTAP19-6Q3LI70 58 aa2.17□□□□□ -2.06
VPS41-205ENST00000414632 MT1BP07438 61 aa2.16□□□□□ -2.06
VPS41-205ENST00000414632 DMAC1Q96GE9 116 aa2.16□□□□□ -2.06
VPS41-205ENST00000414632 SPRR2GQ9BYE4 73 aa2.15□□□□□ -2.07
VPS41-205ENST00000414632 KRTAP4-3Q9BYR4 195 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms