RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 CRIPTQ9P021 101 aa5.22□□□□□ -1.57
LIMS2-210ENST00000413578 H3BT86 120 aa5.21□□□□□ -1.58
LIMS2-210ENST00000413578 IMUPQ9GZP8 106 aa5.21□□□□□ -1.58
LIMS2-210ENST00000413578 GTF2H5Q6ZYL4 71 aa5.2□□□□□ -1.58
LIMS2-210ENST00000413578 A0A1B0GV90 55 aa5.18□□□□□ -1.58
LIMS2-210ENST00000413578 PRO0461Q9UI25 63 aa5.18□□□□□ -1.58
LIMS2-210ENST00000413578 KRTAP2-2Q9BYT5 123 aa5.17□□□□□ -1.58
LIMS2-210ENST00000413578 KRTAP2-1Q9BYU5 128 aa5.17□□□□□ -1.58
LIMS2-210ENST00000413578 LCE1AQ5T7P2 110 aa5.16□□□□□ -1.58
LIMS2-210ENST00000413578 A0A087WVE0 104 aa5.14□□□□□ -1.59
LIMS2-210ENST00000413578 MT1XP80297 61 aa5.13□□□□□ -1.59
LIMS2-210ENST00000413578 F8W1H4 67 aa5.11□□□□□ -1.59
LIMS2-210ENST00000413578 ETDBQ3ZM63 59 aa5.11□□□□□ -1.59
LIMS2-210ENST00000413578 KRTAP8-1Q8IUC2 63 aa5.1□□□□□ -1.59
LIMS2-210ENST00000413578 H0YAA0 97 aa5.09□□□□□ -1.59
LIMS2-210ENST00000413578 TP53AIP1Q9HCN2 124 aa5.09□□□□□ -1.59
LIMS2-210ENST00000413578 KRTAP12-2P59991 146 aa5.08□□□□□ -1.6
LIMS2-210ENST00000413578 PRO2289Q9P1D8 64 aa5.08□□□□□ -1.6
LIMS2-210ENST00000413578 CYP4F30PQ9H0H9 118 aa5.06□□□□□ -1.6
LIMS2-210ENST00000413578 SPRR2DP22532 72 aa5.04□□□□□ -1.6
LIMS2-210ENST00000413578 UBL5Q9BZL1 73 aa5.04□□□□□ -1.6
LIMS2-210ENST00000413578 A8MUN3 132 aa5.02□□□□□ -1.61
LIMS2-210ENST00000413578 KRTAP4-8A0A0G2JLE6 195 aa5□□□□□ -1.61
LIMS2-210ENST00000413578 KRTAP4-8Q9BYQ9 185 aa5□□□□□ -1.61
LIMS2-210ENST00000413578 NDUFC1O43677 76 aa4.97□□□□□ -1.61
LIMS2-210ENST00000413578 ADM2Q7Z4H4 148 aa4.97□□□□□ -1.61
LIMS2-210ENST00000413578 LOC101927531A0A1B0GV80 90 aa4.96□□□□□ -1.62
LIMS2-210ENST00000413578 PLAC4Q8WY50 150 aa4.96□□□□□ -1.62
LIMS2-210ENST00000413578 GPR98Q8WXG9 6306 aa4.95□□□□□ -1.62
LIMS2-210ENST00000413578 LCE3BQ5TA77 95 aa4.95□□□□□ -1.62
LIMS2-210ENST00000413578 TRAV22A0A0B4J277 110 aa4.94□□□□□ -1.62
LIMS2-210ENST00000413578 FAM240AA0A1B0GVK7 77 aa4.91□□□□□ -1.62
LIMS2-210ENST00000413578 ACYP1P07311 99 aa4.91□□□□□ -1.62
LIMS2-210ENST00000413578 J3QR89 54 aa4.88□□□□□ -1.63
LIMS2-210ENST00000413578 KRTAP10-7P60409 375 aaPredicted RBP4.88□□□□□ -1.63
LIMS2-210ENST00000413578 KRTAP10-12P60413 245 aa4.87□□□□□ -1.63
LIMS2-210ENST00000413578 P0C880 135 aa4.86□□□□□ -1.63
LIMS2-210ENST00000413578 R4GN34 69 aa4.86□□□□□ -1.63
LIMS2-210ENST00000413578 HIST1H4AP62805 103 aaKnown RBP4.85□□□□□ -1.63
LIMS2-210ENST00000413578 ATP5EP2Q5VTU8 51 aa4.84□□□□□ -1.63
LIMS2-210ENST00000413578 LINC00643Q86TS7 51 aa4.83□□□□□ -1.64
LIMS2-210ENST00000413578 K7ERU9 68 aa4.82□□□□□ -1.64
LIMS2-210ENST00000413578 M0QZ58 72 aa4.81□□□□□ -1.64
LIMS2-210ENST00000413578 ATOX1O00244 68 aa4.81□□□□□ -1.64
LIMS2-210ENST00000413578 UQCRQO14949 82 aa4.81□□□□□ -1.64
LIMS2-210ENST00000413578 H0Y9P7 68 aa4.8□□□□□ -1.64
LIMS2-210ENST00000413578 DSTQ03001 7570 aaKnown RBP4.79□□□□□ -1.64
LIMS2-210ENST00000413578 KRTAP3-2Q9BYR7 98 aa4.79□□□□□ -1.64
LIMS2-210ENST00000413578 C20orf197Q8N268 126 aa4.78□□□□□ -1.64
LIMS2-210ENST00000413578 MT-ATP8P03928 68 aa4.75□□□□□ -1.65
LIMS2-210ENST00000413578 LINC01554Q52M75 96 aa4.73□□□□□ -1.65
LIMS2-210ENST00000413578 LINC00208Q96KT6 92 aa4.7□□□□□ -1.66
LIMS2-210ENST00000413578 KRTAP4-9Q9BYQ8 210 aa4.68□□□□□ -1.66
LIMS2-210ENST00000413578 SCGB1A1P11684 91 aa4.66□□□□□ -1.66
LIMS2-210ENST00000413578 LCE5AQ5TCM9 118 aa4.66□□□□□ -1.66
LIMS2-210ENST00000413578 DMAC1Q96GE9 116 aa4.65□□□□□ -1.67
LIMS2-210ENST00000413578 HMCN1Q96RW7 5635 aa4.65□□□□□ -1.67
LIMS2-210ENST00000413578 OCR1Q9BZK8 76 aa4.63□□□□□ -1.67
LIMS2-210ENST00000413578 KRTAP19-7Q3SYF9 63 aa4.61□□□□□ -1.67
LIMS2-210ENST00000413578 MP68P56378 58 aa4.6□□□□□ -1.67
LIMS2-210ENST00000413578 KRTAP19-3Q7Z4W3 81 aa4.58□□□□□ -1.68
LIMS2-210ENST00000413578 MT1EP04732 61 aa4.57□□□□□ -1.68
LIMS2-210ENST00000413578 LCE1DQ5T752 114 aa4.56□□□□□ -1.68
LIMS2-210ENST00000413578 AHNAK2Q8IVF2 5795 aa4.55□□□□□ -1.68
LIMS2-210ENST00000413578 TRAV7A0A075B6U4 112 aa4.54□□□□□ -1.68
LIMS2-210ENST00000413578 H3BPC8 53 aa4.53□□□□□ -1.68
LIMS2-210ENST00000413578 SMIM20Q8N5G0 67 aa4.53□□□□□ -1.68
LIMS2-210ENST00000413578 SNURFQ9Y675 71 aa4.49□□□□□ -1.69
LIMS2-210ENST00000413578 SERP2Q8N6R1 65 aa4.48□□□□□ -1.69
LIMS2-210ENST00000413578 CYSTM1Q9H1C7 97 aa4.48□□□□□ -1.69
LIMS2-210ENST00000413578 LCE4AQ5TA78 99 aa4.47□□□□□ -1.69
LIMS2-210ENST00000413578 MT1GP13640 62 aa4.43□□□□□ -1.7
LIMS2-210ENST00000413578 MT4P47944 62 aa4.43□□□□□ -1.7
LIMS2-210ENST00000413578 KRTAP13-4Q3LI77 160 aa4.43□□□□□ -1.7
LIMS2-210ENST00000413578 ACYP2P14621 99 aa4.42□□□□□ -1.7
LIMS2-210ENST00000413578 KRTAP5-10Q6L8G5 202 aa4.42□□□□□ -1.7
LIMS2-210ENST00000413578 ANAPC13Q9BS18 74 aa4.42□□□□□ -1.7
LIMS2-210ENST00000413578 COX7CP15954 63 aa4.41□□□□□ -1.7
LIMS2-210ENST00000413578 SPTSSBQ8NFR3 76 aa4.4□□□□□ -1.71
LIMS2-210ENST00000413578 CAMK2N1Q7Z7J9 78 aa4.39□□□□□ -1.71
LIMS2-210ENST00000413578 KRTAP5-4Q6L8H1 288 aa4.38□□□□□ -1.71
LIMS2-210ENST00000413578 KRTAP19-5Q3LI72 72 aa4.37□□□□□ -1.71
LIMS2-210ENST00000413578 PP632Q6XCG6 107 aa4.36□□□□□ -1.71
LIMS2-210ENST00000413578 MT1MQ8N339 61 aa4.36□□□□□ -1.71
LIMS2-210ENST00000413578 CCDC179H3BU77 68 aa4.34□□□□□ -1.71
LIMS2-210ENST00000413578 A0A0D9SG42 100 aa4.32□□□□□ -1.72
LIMS2-210ENST00000413578 KRTAP4-6Q9BYQ5 205 aa4.32□□□□□ -1.72
LIMS2-210ENST00000413578 MT1LQ93083 61 aa4.31□□□□□ -1.72
LIMS2-210ENST00000413578 CHKB-CPT1BH3BT56 60 aa4.3□□□□□ -1.72
LIMS2-210ENST00000413578 SPANXA2-OT1Q8N9U9 137 aa4.3□□□□□ -1.72
LIMS2-210ENST00000413578 H7BZZ5 65 aa4.29□□□□□ -1.72
LIMS2-210ENST00000413578 KRTAP5-7Q6L8G8 165 aa4.29□□□□□ -1.72
LIMS2-210ENST00000413578 KRTAP4-3Q9BYR4 195 aa4.27□□□□□ -1.73
LIMS2-210ENST00000413578 KRTAP5-3Q6L8H2 238 aa4.23□□□□□ -1.73
LIMS2-210ENST00000413578 COA5Q86WW8 74 aa4.23□□□□□ -1.73
LIMS2-210ENST00000413578 ATP5EP56381 51 aaPredicted RBP4.14□□□□□ -1.75
LIMS2-210ENST00000413578 KRTAP12-1P59990 96 aa4.14□□□□□ -1.75
LIMS2-210ENST00000413578 TMEM258P61165 79 aa4.14□□□□□ -1.75
LIMS2-210ENST00000413578 KRTAP20-2Q3LI61 65 aa4.13□□□□□ -1.75
LIMS2-210ENST00000413578 SPATA8Q6RVD6 105 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms