RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 IGKV2D-30A0A075B6S6 120 aa7.07□□□□□ -1.28
LITAF-203ENST00000413364 KRTAP10-8P60410 259 aa7.07□□□□□ -1.28
LITAF-203ENST00000413364 C9orf92A6NGG3 77 aa7.06□□□□□ -1.28
LITAF-203ENST00000413364 KRTAP15-1Q3LI76 137 aa7.06□□□□□ -1.28
LITAF-203ENST00000413364 Q8N1X5 172 aa7.06□□□□□ -1.28
LITAF-203ENST00000413364 HSPG2P98160 4391 aa7.05□□□□□ -1.28
LITAF-203ENST00000413364 EPPK1P58107 5090 aaKnown RBP7.04□□□□□ -1.28
LITAF-203ENST00000413364 FLG2Q5D862 2391 aaPredicted RBP7.03□□□□□ -1.28
LITAF-203ENST00000413364 A0A1B0GU33 70 aa7.03□□□□□ -1.28
LITAF-203ENST00000413364 CRIPTQ9P021 101 aa7.03□□□□□ -1.28
LITAF-203ENST00000413364 RYR1P21817 5038 aa7.02□□□□□ -1.29
LITAF-203ENST00000413364 KRTAP17-1Q9BYP8 105 aa7.01□□□□□ -1.29
LITAF-203ENST00000413364 LUZP6Q538Z0 58 aa6.98□□□□□ -1.29
LITAF-203ENST00000413364 LCE2BO14633 110 aa6.97□□□□□ -1.29
LITAF-203ENST00000413364 H1FX-AS1Q4G0G2 97 aa6.96□□□□□ -1.3
LITAF-203ENST00000413364 TNXBP22105 4242 aa6.96□□□□□ -1.3
LITAF-203ENST00000413364 LRP1Q07954 4544 aaKnown RBP6.94□□□□□ -1.3
LITAF-203ENST00000413364 KIAA1109Q2LD37 5005 aa6.92□□□□□ -1.3
LITAF-203ENST00000413364 MT1HL1P0DM35 61 aa6.9□□□□□ -1.31
LITAF-203ENST00000413364 FAT3Q8TDW7 4589 aa6.9□□□□□ -1.31
LITAF-203ENST00000413364 TPRXLQ17RH7 258 aa6.87□□□□□ -1.31
LITAF-203ENST00000413364 DMBT1Q9UGM3 2413 aaPredicted RBP6.85□□□□□ -1.31
LITAF-203ENST00000413364 SEC61BP60468 96 aaKnown RBP6.85□□□□□ -1.31
LITAF-203ENST00000413364 RPL37P61927 97 aaKnown RBP6.81□□□□□ -1.32
LITAF-203ENST00000413364 BIRC6Q9NR09 4857 aa6.81□□□□□ -1.32
LITAF-203ENST00000413364 XP32Q5T750 250 aa6.8□□□□□ -1.32
LITAF-203ENST00000413364 LCE2CQ5TA81 110 aa6.79□□□□□ -1.32
LITAF-203ENST00000413364 KRTAP3-1Q9BYR8 98 aa6.78□□□□□ -1.32
LITAF-203ENST00000413364 MYCBP2O75592 4640 aa6.76□□□□□ -1.33
LITAF-203ENST00000413364 COX6B2Q6YFQ2 88 aa6.75□□□□□ -1.33
LITAF-203ENST00000413364 KRTAP4-5Q9BYR2 181 aa6.75□□□□□ -1.33
LITAF-203ENST00000413364 HERC2O95714 4834 aa6.69□□□□□ -1.34
LITAF-203ENST00000413364 C10orf95Q9H7T3 257 aa6.67□□□□□ -1.34
LITAF-203ENST00000413364 LCE2AQ5TA79 106 aaPredicted RBP6.66□□□□□ -1.34
LITAF-203ENST00000413364 ABCA13Q86UQ4 5058 aa6.62□□□□□ -1.35
LITAF-203ENST00000413364 S4R3F8 94 aa6.51□□□□□ -1.37
LITAF-203ENST00000413364 PCLOQ9Y6V0 5065 aa6.5□□□□□ -1.37
LITAF-203ENST00000413364 LRP2P98164 4655 aa6.48□□□□□ -1.37
LITAF-203ENST00000413364 A0A0D9SG42 100 aa6.47□□□□□ -1.37
LITAF-203ENST00000413364 LPAP08519 4548 aa6.44□□□□□ -1.38
LITAF-203ENST00000413364 LORP23490 312 aaPredicted RBP6.43□□□□□ -1.38
LITAF-203ENST00000413364 CAMK2N1Q7Z7J9 78 aa6.42□□□□□ -1.38
LITAF-203ENST00000413364 KRTAP10-6P60371 365 aaPredicted RBP6.42□□□□□ -1.38
LITAF-203ENST00000413364 KRTAP13-4Q3LI77 160 aa6.42□□□□□ -1.38
LITAF-203ENST00000413364 PLAC4Q8WY50 150 aa6.39□□□□□ -1.39
LITAF-203ENST00000413364 KRTAP12-2P59991 146 aa6.32□□□□□ -1.4
LITAF-203ENST00000413364 KRTAP4-1Q9BYQ7 146 aa6.32□□□□□ -1.4
LITAF-203ENST00000413364 HERC1Q15751 4861 aa6.27□□□□□ -1.41
LITAF-203ENST00000413364 KRTAP12-1P59990 96 aa6.25□□□□□ -1.41
LITAF-203ENST00000413364 MUC17Q685J3 4493 aa6.25□□□□□ -1.41
LITAF-203ENST00000413364 KRTAP19-2Q3LHN2 52 aa6.19□□□□□ -1.42
LITAF-203ENST00000413364 HMCN2Q8NDA2 5059 aa6.14□□□□□ -1.43
LITAF-203ENST00000413364 M0QZ58 72 aa6.12□□□□□ -1.43
LITAF-203ENST00000413364 PRO2289Q9P1D8 64 aa6.12□□□□□ -1.43
LITAF-203ENST00000413364 PP632Q6XCG6 107 aa6.02□□□□□ -1.44
LITAF-203ENST00000413364 R4GN34 69 aa6.01□□□□□ -1.45
LITAF-203ENST00000413364 MUC2Q02817 5179 aa5.98□□□□□ -1.45
LITAF-203ENST00000413364 FLGP20930 4061 aaPredicted RBP5.97□□□□□ -1.45
LITAF-203ENST00000413364 UBR4Q5T4S7 5183 aa5.93□□□□□ -1.46
LITAF-203ENST00000413364 INE1O15225 51 aa5.89□□□□□ -1.47
LITAF-203ENST00000413364 RNF213Q63HN8 5207 aa5.84□□□□□ -1.47
LITAF-203ENST00000413364 SPRR5A0A1B0GTR4 108 aa5.83□□□□□ -1.48
LITAF-203ENST00000413364 MT1HP80294 61 aa5.78□□□□□ -1.48
LITAF-203ENST00000413364 M0R2T5 61 aa5.75□□□□□ -1.49
LITAF-203ENST00000413364 FAT4Q6V0I7 4981 aa5.72□□□□□ -1.49
LITAF-203ENST00000413364 SPRR2GQ9BYE4 73 aa5.65□□□□□ -1.5
LITAF-203ENST00000413364 KRTAP23-1A1A580 65 aa5.64□□□□□ -1.51
LITAF-203ENST00000413364 MT2AP02795 61 aa5.63□□□□□ -1.51
LITAF-203ENST00000413364 KRTAP19-1Q8IUB9 90 aa5.62□□□□□ -1.51
LITAF-203ENST00000413364 KRTAP9-8Q9BYQ0 159 aa5.62□□□□□ -1.51
LITAF-203ENST00000413364 MT1FP04733 61 aa5.61□□□□□ -1.51
LITAF-203ENST00000413364 KRTAP10-10P60014 251 aa5.59□□□□□ -1.51
LITAF-203ENST00000413364 KRTAP19-8Q3LI54 63 aa5.46□□□□□ -1.54
LITAF-203ENST00000413364 TNP1P09430 55 aa5.45□□□□□ -1.54
LITAF-203ENST00000413364 KRTAP9-3Q9BYQ3 159 aa5.4□□□□□ -1.55
LITAF-203ENST00000413364 MT1BP07438 61 aa5.37□□□□□ -1.55
LITAF-203ENST00000413364 KRTAP10-5P60370 271 aa5.27□□□□□ -1.57
LITAF-203ENST00000413364 MT1XP80297 61 aa5.27□□□□□ -1.57
LITAF-203ENST00000413364 LCE3AQ5TA76 89 aa5.17□□□□□ -1.58
LITAF-203ENST00000413364 KRTAP10-12P60413 245 aa5.08□□□□□ -1.6
LITAF-203ENST00000413364 KRTAP10-7P60409 375 aaPredicted RBP5.08□□□□□ -1.6
LITAF-203ENST00000413364 KRTAP8-1Q8IUC2 63 aa5.07□□□□□ -1.6
LITAF-203ENST00000413364 USH2AO75445 5202 aa5□□□□□ -1.61
LITAF-203ENST00000413364 KRTAP12-3P60328 96 aa4.95□□□□□ -1.62
LITAF-203ENST00000413364 KRTAP9-2Q9BYQ4 174 aa4.9□□□□□ -1.62
LITAF-203ENST00000413364 FSIP2Q5CZC0 6907 aa4.87□□□□□ -1.63
LITAF-203ENST00000413364 KRTAP19-5Q3LI72 72 aa4.83□□□□□ -1.64
LITAF-203ENST00000413364 SSPOA2VEC9 5147 aa4.8□□□□□ -1.64
LITAF-203ENST00000413364 KRTAP4-8A0A0G2JLE6 195 aa4.8□□□□□ -1.64
LITAF-203ENST00000413364 KRTAP19-6Q3LI70 58 aa4.8□□□□□ -1.64
LITAF-203ENST00000413364 KRTAP4-8Q9BYQ9 185 aa4.8□□□□□ -1.64
LITAF-203ENST00000413364 LCE4AQ5TA78 99 aa4.79□□□□□ -1.64
LITAF-203ENST00000413364 KRTAP19-4Q3LI73 84 aa4.78□□□□□ -1.64
LITAF-203ENST00000413364 KMT2DO14686 5537 aa4.72□□□□□ -1.65
LITAF-203ENST00000413364 KRTAP9-6A0A140TA67 174 aa4.72□□□□□ -1.65
LITAF-203ENST00000413364 KRTAP9-7A8MTY7 169 aa4.72□□□□□ -1.65
LITAF-203ENST00000413364 KRTAP19-7Q3SYF9 63 aa4.7□□□□□ -1.66
LITAF-203ENST00000413364 CRCT1Q9UGL9 99 aa4.7□□□□□ -1.66
LITAF-203ENST00000413364 LCE3CQ5T5A8 94 aa4.65□□□□□ -1.67
LITAF-203ENST00000413364 FCGBPQ9Y6R7 5405 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms