RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 S4R3F8 94 aa9.9□□□□□ -0.82
PTPA-208ENST00000411917 LCE2AQ5TA79 106 aaPredicted RBP9.87□□□□□ -0.83
PTPA-208ENST00000411917 LCA10Q71F78 164 aa9.82□□□□□ -0.84
PTPA-208ENST00000411917 KRTAP3-3Q9BYR6 98 aa9.79□□□□□ -0.84
PTPA-208ENST00000411917 CSAG1Q6PB30 78 aa9.75□□□□□ -0.85
PTPA-208ENST00000411917 M0R2T5 61 aa9.73□□□□□ -0.85
PTPA-208ENST00000411917 COA5Q86WW8 74 aa9.73□□□□□ -0.85
PTPA-208ENST00000411917 SPTSSBQ8NFR3 76 aa9.72□□□□□ -0.85
PTPA-208ENST00000411917 CHKB-CPT1BH3BT56 60 aa9.71□□□□□ -0.86
PTPA-208ENST00000411917 KRTAP10-6P60371 365 aaPredicted RBP9.63□□□□□ -0.87
PTPA-208ENST00000411917 H0YAA0 97 aa9.62□□□□□ -0.87
PTPA-208ENST00000411917 LORP23490 312 aaPredicted RBP9.62□□□□□ -0.87
PTPA-208ENST00000411917 SERP1Q9Y6X1 66 aa9.59□□□□□ -0.87
PTPA-208ENST00000411917 KRTAP9-8Q9BYQ0 159 aa9.53□□□□□ -0.88
PTPA-208ENST00000411917 RPS28P62857 69 aaKnown RBP9.47□□□□□ -0.89
PTPA-208ENST00000411917 MT2AP02795 61 aa9.44□□□□□ -0.9
PTPA-208ENST00000411917 MT1FP04733 61 aa9.36□□□□□ -0.91
PTPA-208ENST00000411917 ADM2Q7Z4H4 148 aa9.36□□□□□ -0.91
PTPA-208ENST00000411917 KRTAP3-2Q9BYR7 98 aa9.35□□□□□ -0.91
PTPA-208ENST00000411917 CRIPTQ9P021 101 aa9.34□□□□□ -0.91
PTPA-208ENST00000411917 KRTAP10-10P60014 251 aa9.32□□□□□ -0.92
PTPA-208ENST00000411917 SEC61GP60059 68 aa9.31□□□□□ -0.92
PTPA-208ENST00000411917 LINC01558Q9Y6Z2 57 aa9.31□□□□□ -0.92
PTPA-208ENST00000411917 SMIM26A0A096LP01 95 aa9.29□□□□□ -0.92
PTPA-208ENST00000411917 V9GYY9 64 aa9.27□□□□□ -0.93
PTPA-208ENST00000411917 P0C880 135 aa9.24□□□□□ -0.93
PTPA-208ENST00000411917 Q1T7F1 81 aa9.23□□□□□ -0.93
PTPA-208ENST00000411917 A0A1B0GU69 56 aa9.22□□□□□ -0.93
PTPA-208ENST00000411917 KRTAP9-3Q9BYQ3 159 aa9.22□□□□□ -0.93
PTPA-208ENST00000411917 PRR15LQ9BU68 103 aa9.21□□□□□ -0.94
PTPA-208ENST00000411917 SPRR2GQ9BYE4 73 aa9.17□□□□□ -0.94
PTPA-208ENST00000411917 LCE2DQ5TA82 110 aaPredicted RBP9.16□□□□□ -0.94
PTPA-208ENST00000411917 M0QZ58 72 aa9.13□□□□□ -0.95
PTPA-208ENST00000411917 KRTAP19-1Q8IUB9 90 aa9.1□□□□□ -0.95
PTPA-208ENST00000411917 R4GN34 69 aa9.1□□□□□ -0.95
PTPA-208ENST00000411917 A0A1B0GU33 70 aa9.07□□□□□ -0.96
PTPA-208ENST00000411917 Q5VV11 94 aa9.05□□□□□ -0.96
PTPA-208ENST00000411917 KRTAP19-8Q3LI54 63 aa8.99□□□□□ -0.97
PTPA-208ENST00000411917 LCE2BO14633 110 aa8.96□□□□□ -0.98
PTPA-208ENST00000411917 KRTAP13-4Q3LI77 160 aa8.93□□□□□ -0.98
PTPA-208ENST00000411917 UQCR11O14957 56 aa8.92□□□□□ -0.98
PTPA-208ENST00000411917 PSPHP1O15172 72 aa8.92□□□□□ -0.98
PTPA-208ENST00000411917 A6NN06 94 aa8.91□□□□□ -0.98
PTPA-208ENST00000411917 USH2AO75445 5202 aa8.9□□□□□ -0.98
PTPA-208ENST00000411917 KRTAP9-2Q9BYQ4 174 aa8.87□□□□□ -0.99
PTPA-208ENST00000411917 SPATA8Q6RVD6 105 aa8.83□□□□□ -1
PTPA-208ENST00000411917 MT1BP07438 61 aa8.81□□□□□ -1
PTPA-208ENST00000411917 LINC01554Q52M75 96 aa8.77□□□□□ -1.01
PTPA-208ENST00000411917 MIR22HGQ0VDD5 57 aa8.74□□□□□ -1.01
PTPA-208ENST00000411917 PLAC4Q8WY50 150 aa8.71□□□□□ -1.02
PTPA-208ENST00000411917 A6NED7 52 aa8.7□□□□□ -1.02
PTPA-208ENST00000411917 A0A0D9SG42 100 aa8.67□□□□□ -1.02
PTPA-208ENST00000411917 SSPOA2VEC9 5147 aa8.65□□□□□ -1.02
PTPA-208ENST00000411917 A8MU10 97 aa8.64□□□□□ -1.03
PTPA-208ENST00000411917 FSIP2Q5CZC0 6907 aa8.64□□□□□ -1.03
PTPA-208ENST00000411917 KRTAP12-1P59990 96 aa8.62□□□□□ -1.03
PTPA-208ENST00000411917 KRTAP19-6Q3LI70 58 aa8.61□□□□□ -1.03
PTPA-208ENST00000411917 CDC42SE1Q9NRR8 79 aa8.59□□□□□ -1.03
PTPA-208ENST00000411917 KRTAP12-2P59991 146 aa8.54□□□□□ -1.04
PTPA-208ENST00000411917 SPINT4Q6UDR6 99 aa8.53□□□□□ -1.04
PTPA-208ENST00000411917 CRCT1Q9UGL9 99 aa8.52□□□□□ -1.05
PTPA-208ENST00000411917 KRTAP10-5P60370 271 aa8.49□□□□□ -1.05
PTPA-208ENST00000411917 PRO2289Q9P1D8 64 aa8.49□□□□□ -1.05
PTPA-208ENST00000411917 K7ERS5 55 aa8.47□□□□□ -1.05
PTPA-208ENST00000411917 CAMK2N1Q7Z7J9 78 aa8.45□□□□□ -1.06
PTPA-208ENST00000411917 MT1XP80297 61 aa8.44□□□□□ -1.06
PTPA-208ENST00000411917 FCGBPQ9Y6R7 5405 aaPredicted RBP8.36□□□□□ -1.07
PTPA-208ENST00000411917 KRTAP9-6A0A140TA67 174 aa8.34□□□□□ -1.07
PTPA-208ENST00000411917 BRK1Q8WUW1 75 aa8.29□□□□□ -1.08
PTPA-208ENST00000411917 C10orf95Q9H7T3 257 aa8.16□□□□□ -1.1
PTPA-208ENST00000411917 KRTAP10-12P60413 245 aa8.08□□□□□ -1.12
PTPA-208ENST00000411917 TNP1P09430 55 aa8.04□□□□□ -1.12
PTPA-208ENST00000411917 KRTAP10-7P60409 375 aaPredicted RBP8.03□□□□□ -1.12
PTPA-208ENST00000411917 ROMO1P60602 79 aa8.03□□□□□ -1.12
PTPA-208ENST00000411917 PRO0628Q9UI54 55 aa8.03□□□□□ -1.12
PTPA-208ENST00000411917 KRTAP25-1Q3LHN0 102 aa8□□□□□ -1.13
PTPA-208ENST00000411917 MACF1Q9UPN3 7388 aaKnown RBP7.99□□□□□ -1.13
PTPA-208ENST00000411917 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.9□□□□□ -1.14
PTPA-208ENST00000411917 PMAIP1Q13794 54 aa7.87□□□□□ -1.15
PTPA-208ENST00000411917 KRTAP23-1A1A580 65 aa7.85□□□□□ -1.15
PTPA-208ENST00000411917 KMT2DO14686 5537 aa7.81□□□□□ -1.16
PTPA-208ENST00000411917 SYNE2Q8WXH0 6885 aaKnown RBP7.78□□□□□ -1.16
PTPA-208ENST00000411917 KRTAP4-8A0A0G2JLE6 195 aa7.75□□□□□ -1.17
PTPA-208ENST00000411917 KRTAP4-8Q9BYQ9 185 aa7.75□□□□□ -1.17
PTPA-208ENST00000411917 KRTAP8-1Q8IUC2 63 aa7.73□□□□□ -1.17
PTPA-208ENST00000411917 KRTAP6-3Q3LI67 103 aa7.69□□□□□ -1.18
PTPA-208ENST00000411917 LCE3AQ5TA76 89 aa7.69□□□□□ -1.18
PTPA-208ENST00000411917 PP632Q6XCG6 107 aa7.69□□□□□ -1.18
PTPA-208ENST00000411917 KRTAP5-9P26371 169 aa7.68□□□□□ -1.18
PTPA-208ENST00000411917 KRTAP9-7A8MTY7 169 aa7.57□□□□□ -1.2
PTPA-208ENST00000411917 KRTAP19-7Q3SYF9 63 aa7.55□□□□□ -1.2
PTPA-208ENST00000411917 KRTAP19-5Q3LI72 72 aa7.5□□□□□ -1.21
PTPA-208ENST00000411917 SPRR2FQ96RM1 72 aa7.5□□□□□ -1.21
PTPA-208ENST00000411917 KTN1-AS1Q86SY8 53 aa7.48□□□□□ -1.21
PTPA-208ENST00000411917 MT1EP04732 61 aa7.45□□□□□ -1.22
PTPA-208ENST00000411917 KRTAP12-3P60328 96 aa7.45□□□□□ -1.22
PTPA-208ENST00000411917 MUC12Q9UKN1 5478 aa7.42□□□□□ -1.22
PTPA-208ENST00000411917 MDN1Q9NU22 5596 aa7.38□□□□□ -1.23
PTPA-208ENST00000411917 PRAC1Q96KF2 57 aa7.31□□□□□ -1.24
PTPA-208ENST00000411917 KRTAP19-4Q3LI73 84 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms