RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 NEBP20929 6669 aa6.35□□□□□ -1.39
MCF2L-210ENST00000409954 A0A087WVE0 104 aa6.34□□□□□ -1.39
MCF2L-210ENST00000409954 UQCRQO14949 82 aa6.34□□□□□ -1.39
MCF2L-210ENST00000409954 NDUFC1O43677 76 aa6.34□□□□□ -1.39
MCF2L-210ENST00000409954 H0YAA0 97 aa6.33□□□□□ -1.4
MCF2L-210ENST00000409954 ATOX1O00244 68 aa6.32□□□□□ -1.4
MCF2L-210ENST00000409954 ATP5EP2Q5VTU8 51 aa6.3□□□□□ -1.4
MCF2L-210ENST00000409954 KRTAP5-9P26371 169 aa6.29□□□□□ -1.4
MCF2L-210ENST00000409954 A8MUN3 132 aa6.28□□□□□ -1.4
MCF2L-210ENST00000409954 HIST1H4AP62805 103 aaKnown RBP6.28□□□□□ -1.4
MCF2L-210ENST00000409954 FAM240AA0A1B0GVK7 77 aa6.27□□□□□ -1.41
MCF2L-210ENST00000409954 H0Y9P7 68 aa6.27□□□□□ -1.41
MCF2L-210ENST00000409954 MUC12Q9UKN1 5478 aa6.26□□□□□ -1.41
MCF2L-210ENST00000409954 PCP4L1A6NKN8 68 aa6.23□□□□□ -1.41
MCF2L-210ENST00000409954 KRTAP20-1Q3LI63 56 aa6.23□□□□□ -1.41
MCF2L-210ENST00000409954 ADM2Q7Z4H4 148 aa6.21□□□□□ -1.42
MCF2L-210ENST00000409954 SVIPQ8NHG7 77 aa6.19□□□□□ -1.42
MCF2L-210ENST00000409954 PRO2289Q9P1D8 64 aa6.19□□□□□ -1.42
MCF2L-210ENST00000409954 LINC00208Q96KT6 92 aa6.18□□□□□ -1.42
MCF2L-210ENST00000409954 LINC00643Q86TS7 51 aa6.17□□□□□ -1.42
MCF2L-210ENST00000409954 MP68P56378 58 aa6.15□□□□□ -1.42
MCF2L-210ENST00000409954 PLAC4Q8WY50 150 aa6.15□□□□□ -1.42
MCF2L-210ENST00000409954 KMT2DO14686 5537 aa6.15□□□□□ -1.43
MCF2L-210ENST00000409954 C20orf197Q8N268 126 aa6.1□□□□□ -1.43
MCF2L-210ENST00000409954 OCR1Q9BZK8 76 aa6.09□□□□□ -1.43
MCF2L-210ENST00000409954 R4GN34 69 aa6.09□□□□□ -1.43
MCF2L-210ENST00000409954 KRTAP2-3P0C7H8 128 aa6.08□□□□□ -1.44
MCF2L-210ENST00000409954 KRTAP2-4Q9BYR9 128 aa6.08□□□□□ -1.44
MCF2L-210ENST00000409954 MDN1Q9NU22 5596 aa6.08□□□□□ -1.44
MCF2L-210ENST00000409954 MT1XP80297 61 aa6.07□□□□□ -1.44
MCF2L-210ENST00000409954 H3BPC8 53 aa6.06□□□□□ -1.44
MCF2L-210ENST00000409954 SPRR2FQ96RM1 72 aa6.05□□□□□ -1.44
MCF2L-210ENST00000409954 P0C880 135 aa6.02□□□□□ -1.45
MCF2L-210ENST00000409954 KRTAP12-2P59991 146 aa6.01□□□□□ -1.45
MCF2L-210ENST00000409954 KRTAP8-1Q8IUC2 63 aa6.01□□□□□ -1.45
MCF2L-210ENST00000409954 M0QZ58 72 aa6□□□□□ -1.45
MCF2L-210ENST00000409954 SPRR2EP22531 72 aa6□□□□□ -1.45
MCF2L-210ENST00000409954 SPRR2BP35325 72 aa6□□□□□ -1.45
MCF2L-210ENST00000409954 SPRR2AP35326 72 aa6□□□□□ -1.45
MCF2L-210ENST00000409954 DMAC1Q96GE9 116 aa5.99□□□□□ -1.45
MCF2L-210ENST00000409954 SCGB1A1P11684 91 aa5.96□□□□□ -1.46
MCF2L-210ENST00000409954 KRTAP3-2Q9BYR7 98 aa5.95□□□□□ -1.46
MCF2L-210ENST00000409954 PCP4P48539 62 aa5.94□□□□□ -1.46
MCF2L-210ENST00000409954 J3QR89 54 aa5.93□□□□□ -1.46
MCF2L-210ENST00000409954 LINC01554Q52M75 96 aa5.92□□□□□ -1.46
MCF2L-210ENST00000409954 TRAV7A0A075B6U4 112 aa5.91□□□□□ -1.46
MCF2L-210ENST00000409954 A0A1B0GV90 55 aa5.91□□□□□ -1.46
MCF2L-210ENST00000409954 LCE1AQ5T7P2 110 aa5.91□□□□□ -1.46
MCF2L-210ENST00000409954 ACYP2P14621 99 aa5.89□□□□□ -1.47
MCF2L-210ENST00000409954 KRTAP2-2Q9BYT5 123 aa5.88□□□□□ -1.47
MCF2L-210ENST00000409954 KRTAP2-1Q9BYU5 128 aa5.88□□□□□ -1.47
MCF2L-210ENST00000409954 KRTAP4-8A0A0G2JLE6 195 aa5.86□□□□□ -1.47
MCF2L-210ENST00000409954 SPTSSBQ8NFR3 76 aa5.86□□□□□ -1.47
MCF2L-210ENST00000409954 KRTAP4-8Q9BYQ9 185 aa5.86□□□□□ -1.47
MCF2L-210ENST00000409954 MT-ATP8P03928 68 aa5.81□□□□□ -1.48
MCF2L-210ENST00000409954 SPRR2DP22532 72 aa5.8□□□□□ -1.48
MCF2L-210ENST00000409954 KRTAP10-12P60413 245 aa5.8□□□□□ -1.48
MCF2L-210ENST00000409954 KRTAP10-7P60409 375 aaPredicted RBP5.79□□□□□ -1.48
MCF2L-210ENST00000409954 SMIM20Q8N5G0 67 aa5.78□□□□□ -1.48
MCF2L-210ENST00000409954 CHKB-CPT1BH3BT56 60 aa5.74□□□□□ -1.49
MCF2L-210ENST00000409954 LCE3BQ5TA77 95 aa5.67□□□□□ -1.5
MCF2L-210ENST00000409954 SPANXA2-OT1Q8N9U9 137 aa5.61□□□□□ -1.51
MCF2L-210ENST00000409954 K7ERU9 68 aa5.6□□□□□ -1.51
MCF2L-210ENST00000409954 SNURFQ9Y675 71 aa5.6□□□□□ -1.51
MCF2L-210ENST00000409954 CAMK2N1Q7Z7J9 78 aa5.58□□□□□ -1.52
MCF2L-210ENST00000409954 KRTAP13-4Q3LI77 160 aa5.54□□□□□ -1.52
MCF2L-210ENST00000409954 SERP2Q8N6R1 65 aa5.48□□□□□ -1.53
MCF2L-210ENST00000409954 SEC61GP60059 68 aa5.47□□□□□ -1.53
MCF2L-210ENST00000409954 SERP1Q9Y6X1 66 aa5.46□□□□□ -1.54
MCF2L-210ENST00000409954 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
MCF2L-210ENST00000409954 KRTAP19-7Q3SYF9 63 aa5.44□□□□□ -1.54
MCF2L-210ENST00000409954 KRTAP19-3Q7Z4W3 81 aa5.41□□□□□ -1.54
MCF2L-210ENST00000409954 COA5Q86WW8 74 aa5.41□□□□□ -1.54
MCF2L-210ENST00000409954 MT1EP04732 61 aa5.4□□□□□ -1.54
MCF2L-210ENST00000409954 A0A0D9SG42 100 aa5.38□□□□□ -1.55
MCF2L-210ENST00000409954 DSTQ03001 7570 aaKnown RBP5.37□□□□□ -1.55
MCF2L-210ENST00000409954 A0A1B0GU33 70 aa5.36□□□□□ -1.55
MCF2L-210ENST00000409954 SPINT4Q6UDR6 99 aa5.35□□□□□ -1.55
MCF2L-210ENST00000409954 SPATA8Q6RVD6 105 aa5.34□□□□□ -1.55
MCF2L-210ENST00000409954 MT1GP13640 62 aa5.31□□□□□ -1.56
MCF2L-210ENST00000409954 CYSTM1Q9H1C7 97 aa5.29□□□□□ -1.56
MCF2L-210ENST00000409954 PP632Q6XCG6 107 aa5.28□□□□□ -1.56
MCF2L-210ENST00000409954 KRTAP4-9Q9BYQ8 210 aa5.28□□□□□ -1.56
MCF2L-210ENST00000409954 KRTAP12-1P59990 96 aa5.27□□□□□ -1.57
MCF2L-210ENST00000409954 KRTAP19-5Q3LI72 72 aa5.27□□□□□ -1.57
MCF2L-210ENST00000409954 COX7CP15954 63 aa5.26□□□□□ -1.57
MCF2L-210ENST00000409954 SMIM26A0A096LP01 95 aa5.23□□□□□ -1.57
MCF2L-210ENST00000409954 GPR98Q8WXG9 6306 aa5.2□□□□□ -1.58
MCF2L-210ENST00000409954 H7BZZ5 65 aa5.2□□□□□ -1.58
MCF2L-210ENST00000409954 A0A1B0GU69 56 aa5.18□□□□□ -1.58
MCF2L-210ENST00000409954 LCE4AQ5TA78 99 aa5.17□□□□□ -1.58
MCF2L-210ENST00000409954 LCE1DQ5T752 114 aa5.15□□□□□ -1.59
MCF2L-210ENST00000409954 MT1MQ8N339 61 aa5.15□□□□□ -1.59
MCF2L-210ENST00000409954 MT1LQ93083 61 aa5.14□□□□□ -1.59
MCF2L-210ENST00000409954 TNP1P09430 55 aa5.13□□□□□ -1.59
MCF2L-210ENST00000409954 A8MU10 97 aa5.09□□□□□ -1.59
MCF2L-210ENST00000409954 ANAPC13Q9BS18 74 aa5.08□□□□□ -1.6
MCF2L-210ENST00000409954 C10orf95Q9H7T3 257 aa5.08□□□□□ -1.6
MCF2L-210ENST00000409954 MT4P47944 62 aa5.07□□□□□ -1.6
MCF2L-210ENST00000409954 LCE3AQ5TA76 89 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms