RNA–Protein interactions for RNA: ENST00000409687.4

SAPCD2-201, Transcript of suppressor APC domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAPCD2, Length 3,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD2-201ENST00000409687 VPS13BQ7Z7G8 4022 aa7.64□□□□□ -1.19
SAPCD2-201ENST00000409687 DYNC2H1Q8NCM8 4307 aaKnown RBP7.63□□□□□ -1.19
SAPCD2-201ENST00000409687 PKHD1P08F94 4074 aa7.62□□□□□ -1.19
SAPCD2-201ENST00000409687 NDUFAF8A1L188 74 aa7.61□□□□□ -1.19
SAPCD2-201ENST00000409687 KRTAP13-4Q3LI77 160 aa7.61□□□□□ -1.19
SAPCD2-201ENST00000409687 SEC61BP60468 96 aaKnown RBP7.58□□□□□ -1.2
SAPCD2-201ENST00000409687 M0R2T5 61 aa7.55□□□□□ -1.2
SAPCD2-201ENST00000409687 KRTAP21-3Q3LHN1 58 aa7.55□□□□□ -1.2
SAPCD2-201ENST00000409687 ALMS1Q8TCU4 4167 aa7.52□□□□□ -1.21
SAPCD2-201ENST00000409687 KRTAP12-2P59991 146 aa7.52□□□□□ -1.21
SAPCD2-201ENST00000409687 DYNC1H1Q14204 4646 aaKnown RBP7.52□□□□□ -1.21
SAPCD2-201ENST00000409687 FAT2Q9NYQ8 4349 aa7.5□□□□□ -1.21
SAPCD2-201ENST00000409687 KRTAP10-6P60371 365 aaPredicted RBP7.49□□□□□ -1.21
SAPCD2-201ENST00000409687 FAT3Q8TDW7 4589 aa7.49□□□□□ -1.21
SAPCD2-201ENST00000409687 KRTAP10-4P60372 401 aaPredicted RBP7.47□□□□□ -1.21
SAPCD2-201ENST00000409687 LRP1Q07954 4544 aaKnown RBP7.46□□□□□ -1.22
SAPCD2-201ENST00000409687 TPRXLQ17RH7 258 aa7.45□□□□□ -1.22
SAPCD2-201ENST00000409687 LUZP6Q538Z0 58 aa7.43□□□□□ -1.22
SAPCD2-201ENST00000409687 KRTAP3-3Q9BYR6 98 aa7.41□□□□□ -1.22
SAPCD2-201ENST00000409687 SACSQ9NZJ4 4579 aa7.36□□□□□ -1.23
SAPCD2-201ENST00000409687 KMT2CQ8NEZ4 4911 aaKnown RBP7.35□□□□□ -1.23
SAPCD2-201ENST00000409687 KIAA1109Q2LD37 5005 aa7.34□□□□□ -1.23
SAPCD2-201ENST00000409687 KRTAP12-1P59990 96 aa7.34□□□□□ -1.23
SAPCD2-201ENST00000409687 KRTAP3-2Q9BYR7 98 aa7.33□□□□□ -1.24
SAPCD2-201ENST00000409687 PKD1P98161 4303 aa7.32□□□□□ -1.24
SAPCD2-201ENST00000409687 APOBP04114 4563 aaKnown RBP7.31□□□□□ -1.24
SAPCD2-201ENST00000409687 RYR1P21817 5038 aa7.3□□□□□ -1.24
SAPCD2-201ENST00000409687 MT1HL1P0DM35 61 aa7.27□□□□□ -1.25
SAPCD2-201ENST00000409687 KRTAP4-5Q9BYR2 181 aa7.26□□□□□ -1.25
SAPCD2-201ENST00000409687 A0A0A0MQY5 61 aa7.19□□□□□ -1.26
SAPCD2-201ENST00000409687 PLAC4Q8WY50 150 aa7.15□□□□□ -1.26
SAPCD2-201ENST00000409687 RYR3Q15413 4870 aa7.14□□□□□ -1.27
SAPCD2-201ENST00000409687 LRP2P98164 4655 aa7.11□□□□□ -1.27
SAPCD2-201ENST00000409687 RYR2Q92736 4967 aa7.08□□□□□ -1.28
SAPCD2-201ENST00000409687 KRTAP17-1Q9BYP8 105 aa7.07□□□□□ -1.28
SAPCD2-201ENST00000409687 LORP23490 312 aaPredicted RBP7.06□□□□□ -1.28
SAPCD2-201ENST00000409687 TNP1P09430 55 aa7.04□□□□□ -1.28
SAPCD2-201ENST00000409687 HSPG2P98160 4391 aa7.02□□□□□ -1.29
SAPCD2-201ENST00000409687 PKHD1L1Q86WI1 4243 aa6.92□□□□□ -1.3
SAPCD2-201ENST00000409687 LPAP08519 4548 aa6.91□□□□□ -1.3
SAPCD2-201ENST00000409687 KRTAP10-10P60014 251 aa6.88□□□□□ -1.31
SAPCD2-201ENST00000409687 KRTAP15-1Q3LI76 137 aa6.86□□□□□ -1.31
SAPCD2-201ENST00000409687 EPPK1P58107 5090 aaKnown RBP6.85□□□□□ -1.31
SAPCD2-201ENST00000409687 KRTAP4-1Q9BYQ7 146 aa6.85□□□□□ -1.31
SAPCD2-201ENST00000409687 PP632Q6XCG6 107 aa6.8□□□□□ -1.32
SAPCD2-201ENST00000409687 ABCA13Q86UQ4 5058 aa6.77□□□□□ -1.33
SAPCD2-201ENST00000409687 TNXBP22105 4242 aa6.74□□□□□ -1.33
SAPCD2-201ENST00000409687 MUC2Q02817 5179 aa6.7□□□□□ -1.34
SAPCD2-201ENST00000409687 HERC2O95714 4834 aa6.64□□□□□ -1.35
SAPCD2-201ENST00000409687 HERC1Q15751 4861 aa6.4□□□□□ -1.38
SAPCD2-201ENST00000409687 FAT4Q6V0I7 4981 aa6.39□□□□□ -1.39
SAPCD2-201ENST00000409687 RNF213Q63HN8 5207 aa6.37□□□□□ -1.39
SAPCD2-201ENST00000409687 LCE3AQ5TA76 89 aa6.35□□□□□ -1.39
SAPCD2-201ENST00000409687 PCLOQ9Y6V0 5065 aa6.27□□□□□ -1.41
SAPCD2-201ENST00000409687 PRO2289Q9P1D8 64 aa6.22□□□□□ -1.41
SAPCD2-201ENST00000409687 KRTAP10-12P60413 245 aa6.17□□□□□ -1.42
SAPCD2-201ENST00000409687 MT1HP80294 61 aa6.16□□□□□ -1.42
SAPCD2-201ENST00000409687 MT1FP04733 61 aa6.15□□□□□ -1.42
SAPCD2-201ENST00000409687 UBR4Q5T4S7 5183 aa6.15□□□□□ -1.43
SAPCD2-201ENST00000409687 MT2AP02795 61 aa6.12□□□□□ -1.43
SAPCD2-201ENST00000409687 KRTAP12-3P60328 96 aa6.12□□□□□ -1.43
SAPCD2-201ENST00000409687 MUC17Q685J3 4493 aa6.11□□□□□ -1.43
SAPCD2-201ENST00000409687 BIRC6Q9NR09 4857 aa6.09□□□□□ -1.44
SAPCD2-201ENST00000409687 KRTAP19-1Q8IUB9 90 aa6.08□□□□□ -1.44
SAPCD2-201ENST00000409687 FSIP2Q5CZC0 6907 aa6.05□□□□□ -1.44
SAPCD2-201ENST00000409687 KRTAP19-2Q3LHN2 52 aa6.05□□□□□ -1.44
SAPCD2-201ENST00000409687 SPRR2GQ9BYE4 73 aa6.04□□□□□ -1.44
SAPCD2-201ENST00000409687 HMCN2Q8NDA2 5059 aa5.99□□□□□ -1.45
SAPCD2-201ENST00000409687 LCE2CQ5TA81 110 aa5.96□□□□□ -1.46
SAPCD2-201ENST00000409687 FLGP20930 4061 aaPredicted RBP5.95□□□□□ -1.46
SAPCD2-201ENST00000409687 KRTAP23-1A1A580 65 aa5.91□□□□□ -1.46
SAPCD2-201ENST00000409687 CRCT1Q9UGL9 99 aa5.88□□□□□ -1.47
SAPCD2-201ENST00000409687 KRTAP10-7P60409 375 aaPredicted RBP5.85□□□□□ -1.47
SAPCD2-201ENST00000409687 KRTAP9-8Q9BYQ0 159 aa5.81□□□□□ -1.48
SAPCD2-201ENST00000409687 MT1XP80297 61 aa5.76□□□□□ -1.49
SAPCD2-201ENST00000409687 MT1BP07438 61 aa5.75□□□□□ -1.49
SAPCD2-201ENST00000409687 USH2AO75445 5202 aa5.75□□□□□ -1.49
SAPCD2-201ENST00000409687 KRTAP8-1Q8IUC2 63 aa5.75□□□□□ -1.49
SAPCD2-201ENST00000409687 KRTAP10-5P60370 271 aa5.74□□□□□ -1.49
SAPCD2-201ENST00000409687 KRTAP19-5Q3LI72 72 aa5.73□□□□□ -1.49
SAPCD2-201ENST00000409687 OBSCNQ5VST9 7968 aa5.69□□□□□ -1.5
SAPCD2-201ENST00000409687 KRTAP4-8A0A0G2JLE6 195 aa5.68□□□□□ -1.5
SAPCD2-201ENST00000409687 KRTAP4-8Q9BYQ9 185 aa5.68□□□□□ -1.5
SAPCD2-201ENST00000409687 KRTAP19-8Q3LI54 63 aa5.64□□□□□ -1.51
SAPCD2-201ENST00000409687 KMT2DO14686 5537 aa5.64□□□□□ -1.51
SAPCD2-201ENST00000409687 INE1O15225 51 aa5.61□□□□□ -1.51
SAPCD2-201ENST00000409687 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
SAPCD2-201ENST00000409687 KRTAP9-3Q9BYQ3 159 aa5.55□□□□□ -1.52
SAPCD2-201ENST00000409687 LCE3CQ5T5A8 94 aa5.51□□□□□ -1.53
SAPCD2-201ENST00000409687 SYNE1Q8NF91 8797 aaKnown RBP5.51□□□□□ -1.53
SAPCD2-201ENST00000409687 KRTAP4-7Q9BYR0 210 aa5.51□□□□□ -1.53
SAPCD2-201ENST00000409687 DSTQ03001 7570 aaKnown RBP5.47□□□□□ -1.53
SAPCD2-201ENST00000409687 LCE2BO14633 110 aa5.47□□□□□ -1.53
SAPCD2-201ENST00000409687 FCGBPQ9Y6R7 5405 aaPredicted RBP5.37□□□□□ -1.55
SAPCD2-201ENST00000409687 MT1GP13640 62 aa5.19□□□□□ -1.58
SAPCD2-201ENST00000409687 SPRR2FQ96RM1 72 aa5.17□□□□□ -1.58
SAPCD2-201ENST00000409687 KRTAP4-3Q9BYR4 195 aa5.13□□□□□ -1.59
SAPCD2-201ENST00000409687 LOC100996750A0A140TA64 210 aa5.11□□□□□ -1.59
SAPCD2-201ENST00000409687 KRTAP9-6A8MVA2 160 aa5.08□□□□□ -1.6
SAPCD2-201ENST00000409687 MUC12Q9UKN1 5478 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 269.2 ms