RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 Q5VV11 94 aa5.61□□□□□ -1.51
APOBEC3B-204ENST00000407298 FAM236AA0A1B0GUQ0 79 aa5.59□□□□□ -1.51
APOBEC3B-204ENST00000407298 FAM236BA0A1B0GV22 79 aa5.59□□□□□ -1.51
APOBEC3B-204ENST00000407298 C4orf26Q17RF5 130 aa5.59□□□□□ -1.51
APOBEC3B-204ENST00000407298 KRTAP5-9P26371 169 aa5.58□□□□□ -1.52
APOBEC3B-204ENST00000407298 MT1BP07438 61 aa5.55□□□□□ -1.52
APOBEC3B-204ENST00000407298 KRTAP10-5P60370 271 aa5.54□□□□□ -1.52
APOBEC3B-204ENST00000407298 MDN1Q9NU22 5596 aa5.53□□□□□ -1.52
APOBEC3B-204ENST00000407298 KRTAP19-8Q3LI54 63 aa5.53□□□□□ -1.52
APOBEC3B-204ENST00000407298 TP53AIP1Q9HCN2 124 aa5.53□□□□□ -1.52
APOBEC3B-204ENST00000407298 KMT2DO14686 5537 aa5.52□□□□□ -1.53
APOBEC3B-204ENST00000407298 FAM240AA0A1B0GVK7 77 aa5.52□□□□□ -1.53
APOBEC3B-204ENST00000407298 KRTAP2-3P0C7H8 128 aa5.52□□□□□ -1.53
APOBEC3B-204ENST00000407298 KRTAP2-4Q9BYR9 128 aa5.52□□□□□ -1.53
APOBEC3B-204ENST00000407298 C5orf47Q569G3 176 aa5.51□□□□□ -1.53
APOBEC3B-204ENST00000407298 SPRR2GQ9BYE4 73 aa5.51□□□□□ -1.53
APOBEC3B-204ENST00000407298 ACYP1P07311 99 aa5.5□□□□□ -1.53
APOBEC3B-204ENST00000407298 KRTAP5-3Q6L8H2 238 aa5.49□□□□□ -1.53
APOBEC3B-204ENST00000407298 ATP5EP2Q5VTU8 51 aa5.47□□□□□ -1.53
APOBEC3B-204ENST00000407298 CSAG1Q6PB30 78 aa5.47□□□□□ -1.53
APOBEC3B-204ENST00000407298 C1orf64Q8NEQ6 169 aa5.47□□□□□ -1.53
APOBEC3B-204ENST00000407298 IMUPQ9GZP8 106 aa5.45□□□□□ -1.54
APOBEC3B-204ENST00000407298 CYP4F30PQ9H0H9 118 aa5.45□□□□□ -1.54
APOBEC3B-204ENST00000407298 S4R3F8 94 aa5.45□□□□□ -1.54
APOBEC3B-204ENST00000407298 TRAV22A0A0B4J277 110 aa5.44□□□□□ -1.54
APOBEC3B-204ENST00000407298 A0A1B0GV90 55 aa5.44□□□□□ -1.54
APOBEC3B-204ENST00000407298 LCA10Q71F78 164 aa5.44□□□□□ -1.54
APOBEC3B-204ENST00000407298 A0A087WVE0 104 aa5.41□□□□□ -1.54
APOBEC3B-204ENST00000407298 HIST1H4AP62805 103 aaKnown RBP5.41□□□□□ -1.54
APOBEC3B-204ENST00000407298 KLKP1Q107X0 134 aa5.41□□□□□ -1.54
APOBEC3B-204ENST00000407298 LOC101927531A0A1B0GV80 90 aa5.4□□□□□ -1.54
APOBEC3B-204ENST00000407298 LINC00643Q86TS7 51 aa5.39□□□□□ -1.55
APOBEC3B-204ENST00000407298 UQCRQO14949 82 aa5.37□□□□□ -1.55
APOBEC3B-204ENST00000407298 H0Y9P7 68 aa5.36□□□□□ -1.55
APOBEC3B-204ENST00000407298 CRIPTQ9P021 101 aa5.36□□□□□ -1.55
APOBEC3B-204ENST00000407298 SPRR2EP22531 72 aa5.35□□□□□ -1.55
APOBEC3B-204ENST00000407298 SPRR2BP35325 72 aa5.35□□□□□ -1.55
APOBEC3B-204ENST00000407298 SPRR2AP35326 72 aa5.35□□□□□ -1.55
APOBEC3B-204ENST00000407298 SPRR2FQ96RM1 72 aa5.34□□□□□ -1.55
APOBEC3B-204ENST00000407298 ATOX1O00244 68 aa5.33□□□□□ -1.56
APOBEC3B-204ENST00000407298 KRTAP2-2Q9BYT5 123 aa5.32□□□□□ -1.56
APOBEC3B-204ENST00000407298 KRTAP2-1Q9BYU5 128 aa5.32□□□□□ -1.56
APOBEC3B-204ENST00000407298 OCR1Q9BZK8 76 aa5.32□□□□□ -1.56
APOBEC3B-204ENST00000407298 PRO2289Q9P1D8 64 aa5.28□□□□□ -1.56
APOBEC3B-204ENST00000407298 LINC00208Q96KT6 92 aa5.26□□□□□ -1.57
APOBEC3B-204ENST00000407298 A8MUN3 132 aa5.23□□□□□ -1.57
APOBEC3B-204ENST00000407298 KRTAP8-1Q8IUC2 63 aa5.23□□□□□ -1.57
APOBEC3B-204ENST00000407298 J3QR89 54 aa5.22□□□□□ -1.57
APOBEC3B-204ENST00000407298 MP68P56378 58 aa5.21□□□□□ -1.58
APOBEC3B-204ENST00000407298 LCE1AQ5T7P2 110 aa5.21□□□□□ -1.58
APOBEC3B-204ENST00000407298 H0YAA0 97 aa5.2□□□□□ -1.58
APOBEC3B-204ENST00000407298 NDUFC1O43677 76 aa5.2□□□□□ -1.58
APOBEC3B-204ENST00000407298 KRTAP23-1A1A580 65 aa5.18□□□□□ -1.58
APOBEC3B-204ENST00000407298 SPRR2DP22532 72 aa5.18□□□□□ -1.58
APOBEC3B-204ENST00000407298 H3BPC8 53 aa5.16□□□□□ -1.58
APOBEC3B-204ENST00000407298 KRTAP15-1Q3LI76 137 aa5.16□□□□□ -1.58
APOBEC3B-204ENST00000407298 PLAC4Q8WY50 150 aa5.15□□□□□ -1.59
APOBEC3B-204ENST00000407298 MT1XP80297 61 aa5.13□□□□□ -1.59
APOBEC3B-204ENST00000407298 ADM2Q7Z4H4 148 aa5.13□□□□□ -1.59
APOBEC3B-204ENST00000407298 DMAC1Q96GE9 116 aa5.13□□□□□ -1.59
APOBEC3B-204ENST00000407298 MT-ATP8P03928 68 aa5.12□□□□□ -1.59
APOBEC3B-204ENST00000407298 KRTAP12-2P59991 146 aa5.12□□□□□ -1.59
APOBEC3B-204ENST00000407298 SCGB1A1P11684 91 aa5.11□□□□□ -1.59
APOBEC3B-204ENST00000407298 K7ERU9 68 aa5.06□□□□□ -1.6
APOBEC3B-204ENST00000407298 P0C880 135 aa5.06□□□□□ -1.6
APOBEC3B-204ENST00000407298 TRAV7A0A075B6U4 112 aa5.03□□□□□ -1.6
APOBEC3B-204ENST00000407298 SMIM20Q8N5G0 67 aa5□□□□□ -1.61
APOBEC3B-204ENST00000407298 R4GN34 69 aa4.99□□□□□ -1.61
APOBEC3B-204ENST00000407298 C20orf197Q8N268 126 aa4.97□□□□□ -1.61
APOBEC3B-204ENST00000407298 M0QZ58 72 aa4.95□□□□□ -1.62
APOBEC3B-204ENST00000407298 ACYP2P14621 99 aa4.94□□□□□ -1.62
APOBEC3B-204ENST00000407298 SNURFQ9Y675 71 aa4.94□□□□□ -1.62
APOBEC3B-204ENST00000407298 GPR98Q8WXG9 6306 aa4.91□□□□□ -1.62
APOBEC3B-204ENST00000407298 KRTAP10-12P60413 245 aa4.89□□□□□ -1.63
APOBEC3B-204ENST00000407298 KRTAP10-7P60409 375 aaPredicted RBP4.88□□□□□ -1.63
APOBEC3B-204ENST00000407298 SERP2Q8N6R1 65 aa4.87□□□□□ -1.63
APOBEC3B-204ENST00000407298 LINC01554Q52M75 96 aa4.86□□□□□ -1.63
APOBEC3B-204ENST00000407298 SPANXA2-OT1Q8N9U9 137 aa4.86□□□□□ -1.63
APOBEC3B-204ENST00000407298 CHKB-CPT1BH3BT56 60 aa4.84□□□□□ -1.63
APOBEC3B-204ENST00000407298 SPTSSBQ8NFR3 76 aa4.84□□□□□ -1.63
APOBEC3B-204ENST00000407298 KRTAP13-4Q3LI77 160 aa4.77□□□□□ -1.65
APOBEC3B-204ENST00000407298 DSTQ03001 7570 aaKnown RBP4.76□□□□□ -1.65
APOBEC3B-204ENST00000407298 CYSTM1Q9H1C7 97 aa4.74□□□□□ -1.65
APOBEC3B-204ENST00000407298 COX7CP15954 63 aa4.73□□□□□ -1.65
APOBEC3B-204ENST00000407298 COA5Q86WW8 74 aa4.73□□□□□ -1.65
APOBEC3B-204ENST00000407298 H7BZZ5 65 aa4.69□□□□□ -1.66
APOBEC3B-204ENST00000407298 KRTAP19-3Q7Z4W3 81 aa4.64□□□□□ -1.67
APOBEC3B-204ENST00000407298 MT1EP04732 61 aa4.58□□□□□ -1.68
APOBEC3B-204ENST00000407298 KRTAP19-7Q3SYF9 63 aa4.58□□□□□ -1.68
APOBEC3B-204ENST00000407298 HMCN1Q96RW7 5635 aa4.57□□□□□ -1.68
APOBEC3B-204ENST00000407298 SPATA8Q6RVD6 105 aa4.57□□□□□ -1.68
APOBEC3B-204ENST00000407298 CAMK2N1Q7Z7J9 78 aa4.56□□□□□ -1.68
APOBEC3B-204ENST00000407298 A0A0D9SG42 100 aa4.55□□□□□ -1.68
APOBEC3B-204ENST00000407298 ANAPC13Q9BS18 74 aa4.55□□□□□ -1.68
APOBEC3B-204ENST00000407298 SERP1Q9Y6X1 66 aa4.55□□□□□ -1.68
APOBEC3B-204ENST00000407298 SEC61GP60059 68 aa4.54□□□□□ -1.68
APOBEC3B-204ENST00000407298 A0A1B0GU33 70 aa4.53□□□□□ -1.68
APOBEC3B-204ENST00000407298 MT4P47944 62 aa4.53□□□□□ -1.68
APOBEC3B-204ENST00000407298 CCDC179H3BU77 68 aa4.52□□□□□ -1.69
APOBEC3B-204ENST00000407298 MT1GP13640 62 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms