RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 Q5VSD8 79 aa9.5□□□□□ -0.89
EWSR1-207ENST00000406548 KRTAP3-3Q9BYR6 98 aa9.5□□□□□ -0.89
EWSR1-207ENST00000406548 HSPG2P98160 4391 aa9.49□□□□□ -0.89
EWSR1-207ENST00000406548 XP32Q5T750 250 aa9.48□□□□□ -0.89
EWSR1-207ENST00000406548 K7ERS5 55 aa9.48□□□□□ -0.89
EWSR1-207ENST00000406548 KRTAP10-6P60371 365 aaPredicted RBP9.44□□□□□ -0.9
EWSR1-207ENST00000406548 KRTAP25-1Q3LHN0 102 aa9.44□□□□□ -0.9
EWSR1-207ENST00000406548 KRTAP17-1Q9BYP8 105 aa9.44□□□□□ -0.9
EWSR1-207ENST00000406548 RYR1P21817 5038 aa9.42□□□□□ -0.9
EWSR1-207ENST00000406548 S4R3F8 94 aa9.41□□□□□ -0.9
EWSR1-207ENST00000406548 DMBT1Q9UGM3 2413 aaPredicted RBP9.39□□□□□ -0.91
EWSR1-207ENST00000406548 KRTAP3-2Q9BYR7 98 aa9.37□□□□□ -0.91
EWSR1-207ENST00000406548 MYCBP2O75592 4640 aa9.37□□□□□ -0.91
EWSR1-207ENST00000406548 KRTAP13-4Q3LI77 160 aa9.36□□□□□ -0.91
EWSR1-207ENST00000406548 KIAA1109Q2LD37 5005 aa9.33□□□□□ -0.92
EWSR1-207ENST00000406548 EPPK1P58107 5090 aaKnown RBP9.31□□□□□ -0.92
EWSR1-207ENST00000406548 A0A0D9SG42 100 aa9.28□□□□□ -0.92
EWSR1-207ENST00000406548 ROMO1P60602 79 aa9.28□□□□□ -0.92
EWSR1-207ENST00000406548 CRIPTQ9P021 101 aa9.25□□□□□ -0.93
EWSR1-207ENST00000406548 MT1HL1P0DM35 61 aa9.25□□□□□ -0.93
EWSR1-207ENST00000406548 P0C880 135 aa9.24□□□□□ -0.93
EWSR1-207ENST00000406548 LPAP08519 4548 aa9.11□□□□□ -0.95
EWSR1-207ENST00000406548 TPRXLQ17RH7 258 aa9.1□□□□□ -0.95
EWSR1-207ENST00000406548 KRTAP4-5Q9BYR2 181 aa9.1□□□□□ -0.95
EWSR1-207ENST00000406548 LRP2P98164 4655 aa9.07□□□□□ -0.96
EWSR1-207ENST00000406548 KRTAP12-2P59991 146 aa9.06□□□□□ -0.96
EWSR1-207ENST00000406548 KRTAP12-1P59990 96 aa9□□□□□ -0.97
EWSR1-207ENST00000406548 SPINT4Q6UDR6 99 aa8.97□□□□□ -0.97
EWSR1-207ENST00000406548 M0QZ58 72 aa8.96□□□□□ -0.97
EWSR1-207ENST00000406548 C10orf95Q9H7T3 257 aa8.94□□□□□ -0.98
EWSR1-207ENST00000406548 H3BS24 57 aa8.88□□□□□ -0.99
EWSR1-207ENST00000406548 ABCA13Q86UQ4 5058 aa8.84□□□□□ -0.99
EWSR1-207ENST00000406548 BIRC6Q9NR09 4857 aa8.84□□□□□ -0.99
EWSR1-207ENST00000406548 HERC2O95714 4834 aa8.8□□□□□ -1
EWSR1-207ENST00000406548 J3QL48 77 aa8.75□□□□□ -1.01
EWSR1-207ENST00000406548 SEC61BP60468 96 aaKnown RBP8.74□□□□□ -1.01
EWSR1-207ENST00000406548 R4GN34 69 aa8.73□□□□□ -1.01
EWSR1-207ENST00000406548 MUC17Q685J3 4493 aa8.72□□□□□ -1.01
EWSR1-207ENST00000406548 KRTAP4-1Q9BYQ7 146 aa8.62□□□□□ -1.03
EWSR1-207ENST00000406548 KRTAP15-1Q3LI76 137 aa8.62□□□□□ -1.03
EWSR1-207ENST00000406548 LORP23490 312 aaPredicted RBP8.6□□□□□ -1.03
EWSR1-207ENST00000406548 KRTAP19-2Q3LHN2 52 aa8.5□□□□□ -1.05
EWSR1-207ENST00000406548 PCLOQ9Y6V0 5065 aa8.45□□□□□ -1.06
EWSR1-207ENST00000406548 NDUFAF8A1L188 74 aa8.41□□□□□ -1.06
EWSR1-207ENST00000406548 HERC1Q15751 4861 aa8.3□□□□□ -1.08
EWSR1-207ENST00000406548 CAMK2N1Q7Z7J9 78 aa8.29□□□□□ -1.08
EWSR1-207ENST00000406548 FLGP20930 4061 aaPredicted RBP8.26□□□□□ -1.09
EWSR1-207ENST00000406548 HMCN2Q8NDA2 5059 aa8.25□□□□□ -1.09
EWSR1-207ENST00000406548 PLAC4Q8WY50 150 aa8.22□□□□□ -1.09
EWSR1-207ENST00000406548 PP632Q6XCG6 107 aa8.2□□□□□ -1.1
EWSR1-207ENST00000406548 MUC2Q02817 5179 aa8.2□□□□□ -1.1
EWSR1-207ENST00000406548 TNP1P09430 55 aa8□□□□□ -1.13
EWSR1-207ENST00000406548 LCE2CQ5TA81 110 aa7.95□□□□□ -1.14
EWSR1-207ENST00000406548 KRTAP23-1A1A580 65 aa7.93□□□□□ -1.14
EWSR1-207ENST00000406548 UBR4Q5T4S7 5183 aa7.9□□□□□ -1.14
EWSR1-207ENST00000406548 SPRR2GQ9BYE4 73 aa7.87□□□□□ -1.15
EWSR1-207ENST00000406548 FAT4Q6V0I7 4981 aa7.86□□□□□ -1.15
EWSR1-207ENST00000406548 LUZP6Q538Z0 58 aa7.85□□□□□ -1.15
EWSR1-207ENST00000406548 RNF213Q63HN8 5207 aa7.83□□□□□ -1.16
EWSR1-207ENST00000406548 KRTAP19-1Q8IUB9 90 aa7.82□□□□□ -1.16
EWSR1-207ENST00000406548 M0R2T5 61 aa7.76□□□□□ -1.17
EWSR1-207ENST00000406548 MT1HP80294 61 aa7.73□□□□□ -1.17
EWSR1-207ENST00000406548 SPRR5A0A1B0GTR4 108 aa7.67□□□□□ -1.18
EWSR1-207ENST00000406548 MT2AP02795 61 aa7.64□□□□□ -1.19
EWSR1-207ENST00000406548 MT1FP04733 61 aa7.64□□□□□ -1.19
EWSR1-207ENST00000406548 KRTAP10-10P60014 251 aa7.62□□□□□ -1.19
EWSR1-207ENST00000406548 LCE3AQ5TA76 89 aa7.57□□□□□ -1.2
EWSR1-207ENST00000406548 KRTAP9-8Q9BYQ0 159 aa7.56□□□□□ -1.2
EWSR1-207ENST00000406548 KRTAP19-8Q3LI54 63 aa7.51□□□□□ -1.21
EWSR1-207ENST00000406548 A0A0A0MQY5 61 aa7.49□□□□□ -1.21
EWSR1-207ENST00000406548 MT1BP07438 61 aa7.41□□□□□ -1.22
EWSR1-207ENST00000406548 KRTAP10-5P60370 271 aa7.39□□□□□ -1.23
EWSR1-207ENST00000406548 KRTAP8-1Q8IUC2 63 aa7.39□□□□□ -1.23
EWSR1-207ENST00000406548 MT1XP80297 61 aa7.37□□□□□ -1.23
EWSR1-207ENST00000406548 KRTAP10-12P60413 245 aa7.26□□□□□ -1.25
EWSR1-207ENST00000406548 LCE2AQ5TA79 106 aaPredicted RBP7.26□□□□□ -1.25
EWSR1-207ENST00000406548 KRTAP9-3Q9BYQ3 159 aa7.24□□□□□ -1.25
EWSR1-207ENST00000406548 KRTAP12-3P60328 96 aa7.2□□□□□ -1.26
EWSR1-207ENST00000406548 KRTAP10-7P60409 375 aaPredicted RBP7.16□□□□□ -1.26
EWSR1-207ENST00000406548 PRO2289Q9P1D8 64 aa7.09□□□□□ -1.27
EWSR1-207ENST00000406548 LCE2BO14633 110 aa6.97□□□□□ -1.29
EWSR1-207ENST00000406548 KRTAP19-5Q3LI72 72 aa6.88□□□□□ -1.31
EWSR1-207ENST00000406548 INE1O15225 51 aa6.8□□□□□ -1.32
EWSR1-207ENST00000406548 LCE3CQ5T5A8 94 aa6.78□□□□□ -1.32
EWSR1-207ENST00000406548 USH2AO75445 5202 aa6.74□□□□□ -1.33
EWSR1-207ENST00000406548 KRTAP4-8A0A0G2JLE6 195 aa6.69□□□□□ -1.34
EWSR1-207ENST00000406548 KRTAP4-8Q9BYQ9 185 aa6.69□□□□□ -1.34
EWSR1-207ENST00000406548 KMT2DO14686 5537 aa6.68□□□□□ -1.34
EWSR1-207ENST00000406548 KRTAP19-7Q3SYF9 63 aa6.57□□□□□ -1.36
EWSR1-207ENST00000406548 KRTAP9-6A8MVA2 160 aa6.54□□□□□ -1.36
EWSR1-207ENST00000406548 LCE2DQ5TA82 110 aaPredicted RBP6.47□□□□□ -1.37
EWSR1-207ENST00000406548 KRTAP19-6Q3LI70 58 aa6.46□□□□□ -1.38
EWSR1-207ENST00000406548 SSPOA2VEC9 5147 aa6.44□□□□□ -1.38
EWSR1-207ENST00000406548 KRTAP4-7Q9BYR0 210 aa6.43□□□□□ -1.38
EWSR1-207ENST00000406548 KRTAP19-4Q3LI73 84 aa6.42□□□□□ -1.38
EWSR1-207ENST00000406548 MT1LQ93083 61 aa6.38□□□□□ -1.39
EWSR1-207ENST00000406548 MT1EP04732 61 aa6.38□□□□□ -1.39
EWSR1-207ENST00000406548 KRTAP2-3P0C7H8 128 aa6.34□□□□□ -1.39
EWSR1-207ENST00000406548 KRTAP2-4Q9BYR9 128 aa6.34□□□□□ -1.39
EWSR1-207ENST00000406548 KRTAP2-1Q9BYU5 128 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms