RNA–Protein interactions for RNA: ENST00000404970.3

VAMP2-202, Transcript of vesicle associated membrane protein 2, humanhuman

TSL 2 BASIC

Gene VAMP2, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-202ENST00000404970 KRTAP9-3Q9BYQ3 159 aa6.67□□□□□ -1.34
VAMP2-202ENST00000404970 KRTAP10-10P60014 251 aa6.66□□□□□ -1.34
VAMP2-202ENST00000404970 SMIM20Q8N5G0 67 aa6.66□□□□□ -1.34
VAMP2-202ENST00000404970 FAM236AA0A1B0GUQ0 79 aa6.64□□□□□ -1.35
VAMP2-202ENST00000404970 FAM236BA0A1B0GV22 79 aa6.64□□□□□ -1.35
VAMP2-202ENST00000404970 KRTAP4-8Q9BYQ9 185 aa6.63□□□□□ -1.35
VAMP2-202ENST00000404970 S4R3F8 94 aa6.62□□□□□ -1.35
VAMP2-202ENST00000404970 TRAV7A0A075B6U4 112 aa6.6□□□□□ -1.35
VAMP2-202ENST00000404970 LCA10Q71F78 164 aa6.6□□□□□ -1.35
VAMP2-202ENST00000404970 SSPOA2VEC9 5147 aa6.59□□□□□ -1.35
VAMP2-202ENST00000404970 KLKP1Q107X0 134 aa6.59□□□□□ -1.36
VAMP2-202ENST00000404970 A8MUN3 132 aa6.58□□□□□ -1.36
VAMP2-202ENST00000404970 CSAG1Q6PB30 78 aa6.55□□□□□ -1.36
VAMP2-202ENST00000404970 NDUFC1O43677 76 aa6.47□□□□□ -1.37
VAMP2-202ENST00000404970 SERP2Q8N6R1 65 aa6.47□□□□□ -1.37
VAMP2-202ENST00000404970 DMAC1Q96GE9 116 aa6.44□□□□□ -1.38
VAMP2-202ENST00000404970 KRTAP19-1Q8IUB9 90 aa6.42□□□□□ -1.38
VAMP2-202ENST00000404970 FCGBPQ9Y6R7 5405 aaPredicted RBP6.4□□□□□ -1.38
VAMP2-202ENST00000404970 C20orf197Q8N268 126 aa6.4□□□□□ -1.39
VAMP2-202ENST00000404970 SNURFQ9Y675 71 aa6.4□□□□□ -1.39
VAMP2-202ENST00000404970 ACYP2P14621 99 aa6.37□□□□□ -1.39
VAMP2-202ENST00000404970 LCE3BQ5TA77 95 aa6.35□□□□□ -1.39
VAMP2-202ENST00000404970 H0YAA0 97 aa6.34□□□□□ -1.4
VAMP2-202ENST00000404970 COX7CP15954 63 aa6.34□□□□□ -1.4
VAMP2-202ENST00000404970 SPANXA2-OT1Q8N9U9 137 aa6.34□□□□□ -1.4
VAMP2-202ENST00000404970 KRTAP19-6Q3LI70 58 aa6.31□□□□□ -1.4
VAMP2-202ENST00000404970 SPRR2GQ9BYE4 73 aa6.31□□□□□ -1.4
VAMP2-202ENST00000404970 MT1BP07438 61 aa6.28□□□□□ -1.4
VAMP2-202ENST00000404970 SPTSSBQ8NFR3 76 aa6.28□□□□□ -1.4
VAMP2-202ENST00000404970 CRIPTQ9P021 101 aa6.28□□□□□ -1.4
VAMP2-202ENST00000404970 KRTAP19-8Q3LI54 63 aa6.27□□□□□ -1.41
VAMP2-202ENST00000404970 ANAPC13Q9BS18 74 aa6.26□□□□□ -1.41
VAMP2-202ENST00000404970 SYNE2Q8WXH0 6885 aaKnown RBP6.25□□□□□ -1.41
VAMP2-202ENST00000404970 CHKB-CPT1BH3BT56 60 aa6.25□□□□□ -1.41
VAMP2-202ENST00000404970 ADM2Q7Z4H4 148 aa6.25□□□□□ -1.41
VAMP2-202ENST00000404970 KRTAP4-8A0A0G2JLE6 195 aa6.19□□□□□ -1.42
VAMP2-202ENST00000404970 Q5VV11 94 aa6.19□□□□□ -1.42
VAMP2-202ENST00000404970 P0C880 135 aa6.18□□□□□ -1.42
VAMP2-202ENST00000404970 MACF1Q9UPN3 7388 aaKnown RBP6.17□□□□□ -1.42
VAMP2-202ENST00000404970 H7BZZ5 65 aa6.17□□□□□ -1.42
VAMP2-202ENST00000404970 KRTAP9-9Q9BYP9 154 aa6.17□□□□□ -1.42
VAMP2-202ENST00000404970 KRTAP9-4Q9BYQ2 154 aa6.17□□□□□ -1.42
VAMP2-202ENST00000404970 KRTAP4-12Q9BQ66 201 aa6.14□□□□□ -1.43
VAMP2-202ENST00000404970 CYSTM1Q9H1C7 97 aa6.13□□□□□ -1.43
VAMP2-202ENST00000404970 COA5Q86WW8 74 aa6.11□□□□□ -1.43
VAMP2-202ENST00000404970 KRTAP6-3Q3LI67 103 aa6.09□□□□□ -1.43
VAMP2-202ENST00000404970 R4GN34 69 aa6.09□□□□□ -1.43
VAMP2-202ENST00000404970 CCDC179H3BU77 68 aa6.08□□□□□ -1.44
VAMP2-202ENST00000404970 KRTAP10-5P60370 271 aa6.05□□□□□ -1.44
VAMP2-202ENST00000404970 A6NN06 94 aa6.03□□□□□ -1.44
VAMP2-202ENST00000404970 M0QZ58 72 aa6.03□□□□□ -1.44
VAMP2-202ENST00000404970 KRTAP4-7Q9BYR0 210 aa6.02□□□□□ -1.44
VAMP2-202ENST00000404970 ATP5EP56381 51 aaPredicted RBP6.02□□□□□ -1.45
VAMP2-202ENST00000404970 SEC61GP60059 68 aa5.97□□□□□ -1.45
VAMP2-202ENST00000404970 KRTAP20-1Q3LI63 56 aa5.96□□□□□ -1.45
VAMP2-202ENST00000404970 NEBP20929 6669 aa5.95□□□□□ -1.46
VAMP2-202ENST00000404970 PLAC4Q8WY50 150 aa5.95□□□□□ -1.46
VAMP2-202ENST00000404970 SERP1Q9Y6X1 66 aa5.95□□□□□ -1.46
VAMP2-202ENST00000404970 TMEM258P61165 79 aa5.93□□□□□ -1.46
VAMP2-202ENST00000404970 RPS28P62857 69 aaKnown RBP5.93□□□□□ -1.46
VAMP2-202ENST00000404970 MT1XP80297 61 aa5.93□□□□□ -1.46
VAMP2-202ENST00000404970 LINC01554Q52M75 96 aa5.92□□□□□ -1.46
VAMP2-202ENST00000404970 LCE1DQ5T752 114 aa5.92□□□□□ -1.46
VAMP2-202ENST00000404970 KRTAP13-4Q3LI77 160 aa5.89□□□□□ -1.47
VAMP2-202ENST00000404970 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
VAMP2-202ENST00000404970 V9GYY9 64 aa5.83□□□□□ -1.48
VAMP2-202ENST00000404970 A0A1B0GU69 56 aa5.82□□□□□ -1.48
VAMP2-202ENST00000404970 PRO0628Q9UI54 55 aa5.82□□□□□ -1.48
VAMP2-202ENST00000404970 A0A1B0GU33 70 aa5.8□□□□□ -1.48
VAMP2-202ENST00000404970 KRTAP4-9Q9BYQ8 210 aa5.77□□□□□ -1.49
VAMP2-202ENST00000404970 MUC12Q9UKN1 5478 aa5.77□□□□□ -1.49
VAMP2-202ENST00000404970 KMT2DO14686 5537 aa5.77□□□□□ -1.49
VAMP2-202ENST00000404970 PRR15LQ9BU68 103 aa5.77□□□□□ -1.49
VAMP2-202ENST00000404970 KRTAP4-2Q9BYR5 136 aa5.74□□□□□ -1.49
VAMP2-202ENST00000404970 LINC01558Q9Y6Z2 57 aa5.71□□□□□ -1.49
VAMP2-202ENST00000404970 SPATA8Q6RVD6 105 aa5.71□□□□□ -1.5
VAMP2-202ENST00000404970 KRTAP5-9P26371 169 aa5.69□□□□□ -1.5
VAMP2-202ENST00000404970 KRTAP12-2P59991 146 aa5.69□□□□□ -1.5
VAMP2-202ENST00000404970 A0A0D9SG42 100 aa5.68□□□□□ -1.5
VAMP2-202ENST00000404970 KRTAP10-7P60409 375 aaPredicted RBP5.67□□□□□ -1.5
VAMP2-202ENST00000404970 SMIM26A0A096LP01 95 aa5.66□□□□□ -1.5
VAMP2-202ENST00000404970 CAMK2N1Q7Z7J9 78 aa5.64□□□□□ -1.51
VAMP2-202ENST00000404970 KRTAP2-3P0C7H8 128 aa5.64□□□□□ -1.51
VAMP2-202ENST00000404970 KRTAP2-4Q9BYR9 128 aa5.64□□□□□ -1.51
VAMP2-202ENST00000404970 KRTAP10-12P60413 245 aa5.6□□□□□ -1.51
VAMP2-202ENST00000404970 SPINT4Q6UDR6 99 aa5.6□□□□□ -1.51
VAMP2-202ENST00000404970 MDN1Q9NU22 5596 aa5.6□□□□□ -1.51
VAMP2-202ENST00000404970 KRTAP12-1P59990 96 aa5.58□□□□□ -1.52
VAMP2-202ENST00000404970 KRTAP8-1Q8IUC2 63 aa5.56□□□□□ -1.52
VAMP2-202ENST00000404970 UQCR11O14957 56 aa5.55□□□□□ -1.52
VAMP2-202ENST00000404970 A8MU10 97 aa5.54□□□□□ -1.52
VAMP2-202ENST00000404970 BRK1Q8WUW1 75 aa5.53□□□□□ -1.52
VAMP2-202ENST00000404970 SPRR2FQ96RM1 72 aa5.53□□□□□ -1.52
VAMP2-202ENST00000404970 Q1T7F1 81 aa5.52□□□□□ -1.53
VAMP2-202ENST00000404970 PMAIP1Q13794 54 aa5.51□□□□□ -1.53
VAMP2-202ENST00000404970 KRTAP4-11Q9BYQ6 195 aa5.49□□□□□ -1.53
VAMP2-202ENST00000404970 KRTAP5-3Q6L8H2 238 aa5.46□□□□□ -1.53
VAMP2-202ENST00000404970 PSPHP1O15172 72 aa5.45□□□□□ -1.54
VAMP2-202ENST00000404970 MIR22HGQ0VDD5 57 aa5.43□□□□□ -1.54
VAMP2-202ENST00000404970 SPRR2EP22531 72 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 268.9 ms