RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 COX6B2Q6YFQ2 88 aa6.77□□□□□ -1.33
NDEL1-203ENST00000402554 KRTAP3-1Q9BYR8 98 aa6.77□□□□□ -1.33
NDEL1-203ENST00000402554 FAT4Q6V0I7 4981 aa6.76□□□□□ -1.33
NDEL1-203ENST00000402554 PSPHP1O15172 72 aa6.74□□□□□ -1.33
NDEL1-203ENST00000402554 LINC01558Q9Y6Z2 57 aa6.73□□□□□ -1.33
NDEL1-203ENST00000402554 PRR15LQ9BU68 103 aa6.71□□□□□ -1.34
NDEL1-203ENST00000402554 SPTSSBQ8NFR3 76 aa6.67□□□□□ -1.34
NDEL1-203ENST00000402554 Q5VV11 94 aa6.66□□□□□ -1.34
NDEL1-203ENST00000402554 H3BS24 57 aa6.64□□□□□ -1.35
NDEL1-203ENST00000402554 LCE2AQ5TA79 106 aaPredicted RBP6.62□□□□□ -1.35
NDEL1-203ENST00000402554 A0A1B0GU69 56 aa6.6□□□□□ -1.35
NDEL1-203ENST00000402554 RBM12B-AS1Q9P1G2 102 aa6.6□□□□□ -1.35
NDEL1-203ENST00000402554 KRTAP19-2Q3LHN2 52 aa6.59□□□□□ -1.35
NDEL1-203ENST00000402554 H1FX-AS1Q4G0G2 97 aa6.57□□□□□ -1.36
NDEL1-203ENST00000402554 LCE2CQ5TA81 110 aa6.57□□□□□ -1.36
NDEL1-203ENST00000402554 BRK1Q8WUW1 75 aa6.56□□□□□ -1.36
NDEL1-203ENST00000402554 S4R3F8 94 aa6.56□□□□□ -1.36
NDEL1-203ENST00000402554 PMAIP1Q13794 54 aa6.53□□□□□ -1.36
NDEL1-203ENST00000402554 LCA10Q71F78 164 aa6.53□□□□□ -1.36
NDEL1-203ENST00000402554 A6NED7 52 aa6.53□□□□□ -1.36
NDEL1-203ENST00000402554 KRTAP3-3Q9BYR6 98 aa6.51□□□□□ -1.37
NDEL1-203ENST00000402554 MT1HP80294 61 aa6.48□□□□□ -1.37
NDEL1-203ENST00000402554 FLGP20930 4061 aaPredicted RBP6.43□□□□□ -1.38
NDEL1-203ENST00000402554 CDC42SE1Q9NRR8 79 aa6.43□□□□□ -1.38
NDEL1-203ENST00000402554 UQCR11O14957 56 aa6.41□□□□□ -1.38
NDEL1-203ENST00000402554 A8MU10 97 aa6.4□□□□□ -1.39
NDEL1-203ENST00000402554 CSAG1Q6PB30 78 aa6.39□□□□□ -1.39
NDEL1-203ENST00000402554 A0A1B0GU33 70 aa6.36□□□□□ -1.39
NDEL1-203ENST00000402554 M0R2T5 61 aa6.36□□□□□ -1.39
NDEL1-203ENST00000402554 MIR22HGQ0VDD5 57 aa6.36□□□□□ -1.39
NDEL1-203ENST00000402554 A0A0A0MQY5 61 aa6.35□□□□□ -1.39
NDEL1-203ENST00000402554 SPATA8Q6RVD6 105 aa6.35□□□□□ -1.39
NDEL1-203ENST00000402554 KRTAP9-2Q9BYQ4 174 aa6.34□□□□□ -1.39
NDEL1-203ENST00000402554 KRTAP10-6P60371 365 aaPredicted RBP6.32□□□□□ -1.4
NDEL1-203ENST00000402554 KRTAP3-2Q9BYR7 98 aa6.32□□□□□ -1.4
NDEL1-203ENST00000402554 LORP23490 312 aaPredicted RBP6.3□□□□□ -1.4
NDEL1-203ENST00000402554 ADM2Q7Z4H4 148 aa6.28□□□□□ -1.4
NDEL1-203ENST00000402554 H0YAA0 97 aa6.27□□□□□ -1.41
NDEL1-203ENST00000402554 P0C880 135 aa6.26□□□□□ -1.41
NDEL1-203ENST00000402554 LCE2DQ5TA82 110 aaPredicted RBP6.19□□□□□ -1.42
NDEL1-203ENST00000402554 KTN1-AS1Q86SY8 53 aa6.19□□□□□ -1.42
NDEL1-203ENST00000402554 KRTAP13-4Q3LI77 160 aa6.17□□□□□ -1.42
NDEL1-203ENST00000402554 A6NN06 94 aa6.14□□□□□ -1.43
NDEL1-203ENST00000402554 KRTAP9-8Q9BYQ0 159 aa6.14□□□□□ -1.43
NDEL1-203ENST00000402554 M0QZ58 72 aa6.11□□□□□ -1.43
NDEL1-203ENST00000402554 A0A0D9SG42 100 aa6.09□□□□□ -1.43
NDEL1-203ENST00000402554 MT2AP02795 61 aa6.09□□□□□ -1.44
NDEL1-203ENST00000402554 KRTAP9-6A0A140TA67 174 aa6.07□□□□□ -1.44
NDEL1-203ENST00000402554 K7ERS5 55 aa6.05□□□□□ -1.44
NDEL1-203ENST00000402554 MT1FP04733 61 aa6.05□□□□□ -1.44
NDEL1-203ENST00000402554 R4GN34 69 aa6.05□□□□□ -1.44
NDEL1-203ENST00000402554 FSIP2Q5CZC0 6907 aa6.01□□□□□ -1.45
NDEL1-203ENST00000402554 KRTAP10-10P60014 251 aa6□□□□□ -1.45
NDEL1-203ENST00000402554 CRCT1Q9UGL9 99 aa5.99□□□□□ -1.45
NDEL1-203ENST00000402554 LINC01554Q52M75 96 aa5.96□□□□□ -1.46
NDEL1-203ENST00000402554 KRTAP9-3Q9BYQ3 159 aa5.94□□□□□ -1.46
NDEL1-203ENST00000402554 KRTAP12-1P59990 96 aa5.94□□□□□ -1.46
NDEL1-203ENST00000402554 KRTAP12-2P59991 146 aa5.94□□□□□ -1.46
NDEL1-203ENST00000402554 SPINT4Q6UDR6 99 aa5.94□□□□□ -1.46
NDEL1-203ENST00000402554 CRIPTQ9P021 101 aa5.94□□□□□ -1.46
NDEL1-203ENST00000402554 LCE2BO14633 110 aa5.91□□□□□ -1.46
NDEL1-203ENST00000402554 USH2AO75445 5202 aa5.9□□□□□ -1.47
NDEL1-203ENST00000402554 SSPOA2VEC9 5147 aa5.84□□□□□ -1.48
NDEL1-203ENST00000402554 ROMO1P60602 79 aa5.82□□□□□ -1.48
NDEL1-203ENST00000402554 PRAC1Q96KF2 57 aa5.79□□□□□ -1.48
NDEL1-203ENST00000402554 SPRR2GQ9BYE4 73 aa5.77□□□□□ -1.49
NDEL1-203ENST00000402554 KRTAP19-1Q8IUB9 90 aa5.74□□□□□ -1.49
NDEL1-203ENST00000402554 CAMK2N1Q7Z7J9 78 aa5.69□□□□□ -1.5
NDEL1-203ENST00000402554 FCGBPQ9Y6R7 5405 aaPredicted RBP5.64□□□□□ -1.51
NDEL1-203ENST00000402554 PLAC4Q8WY50 150 aa5.64□□□□□ -1.51
NDEL1-203ENST00000402554 KRTAP25-1Q3LHN0 102 aa5.63□□□□□ -1.51
NDEL1-203ENST00000402554 KRTAP19-6Q3LI70 58 aa5.63□□□□□ -1.51
NDEL1-203ENST00000402554 C10orf95Q9H7T3 257 aa5.62□□□□□ -1.51
NDEL1-203ENST00000402554 KRTAP19-8Q3LI54 63 aa5.6□□□□□ -1.51
NDEL1-203ENST00000402554 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.59□□□□□ -1.51
NDEL1-203ENST00000402554 MT1BP07438 61 aa5.58□□□□□ -1.52
NDEL1-203ENST00000402554 KRTAP9-7A8MTY7 169 aa5.47□□□□□ -1.53
NDEL1-203ENST00000402554 MACF1Q9UPN3 7388 aaKnown RBP5.45□□□□□ -1.54
NDEL1-203ENST00000402554 TNP1P09430 55 aa5.43□□□□□ -1.54
NDEL1-203ENST00000402554 KRTAP10-5P60370 271 aa5.4□□□□□ -1.55
NDEL1-203ENST00000402554 MT1XP80297 61 aa5.37□□□□□ -1.55
NDEL1-203ENST00000402554 PP632Q6XCG6 107 aa5.34□□□□□ -1.55
NDEL1-203ENST00000402554 SYNE2Q8WXH0 6885 aaKnown RBP5.33□□□□□ -1.56
NDEL1-203ENST00000402554 PRO2289Q9P1D8 64 aa5.3□□□□□ -1.56
NDEL1-203ENST00000402554 LUZP6Q538Z0 58 aa5.29□□□□□ -1.56
NDEL1-203ENST00000402554 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
NDEL1-203ENST00000402554 KRTAP6-3Q3LI67 103 aa5.24□□□□□ -1.57
NDEL1-203ENST00000402554 LCE3AQ5TA76 89 aa5.17□□□□□ -1.58
NDEL1-203ENST00000402554 KRTAP10-7P60409 375 aaPredicted RBP5.16□□□□□ -1.58
NDEL1-203ENST00000402554 KRTAP10-12P60413 245 aa5.15□□□□□ -1.59
NDEL1-203ENST00000402554 KMT2DO14686 5537 aa5.13□□□□□ -1.59
NDEL1-203ENST00000402554 MUC12Q9UKN1 5478 aa5.08□□□□□ -1.6
NDEL1-203ENST00000402554 NDUFAF8A1L188 74 aa5.07□□□□□ -1.6
NDEL1-203ENST00000402554 KRTAP8-1Q8IUC2 63 aa5.07□□□□□ -1.6
NDEL1-203ENST00000402554 KRTAP5-9P26371 169 aa5.06□□□□□ -1.6
NDEL1-203ENST00000402554 KRTAP4-8A0A0G2JLE6 195 aa5.03□□□□□ -1.6
NDEL1-203ENST00000402554 KRTAP4-8Q9BYQ9 185 aa5.03□□□□□ -1.6
NDEL1-203ENST00000402554 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
NDEL1-203ENST00000402554 SPRR2FQ96RM1 72 aa5□□□□□ -1.61
NDEL1-203ENST00000402554 NEBP20929 6669 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms