RNA–Protein interactions for RNA: ENST00000398637.9

SLC38A1-201, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 8,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-201ENST00000398637 ALMS1Q8TCU4 4167 aa4.75□□□□□ -1.65
SLC38A1-201ENST00000398637 HUWE1Q7Z6Z7 4374 aaKnown RBP4.73□□□□□ -1.65
SLC38A1-201ENST00000398637 SPRR2EP22531 72 aa4.7□□□□□ -1.66
SLC38A1-201ENST00000398637 SPRR2BP35325 72 aa4.7□□□□□ -1.66
SLC38A1-201ENST00000398637 SPRR2AP35326 72 aa4.7□□□□□ -1.66
SLC38A1-201ENST00000398637 AKAP9Q99996 3911 aa4.67□□□□□ -1.66
SLC38A1-201ENST00000398637 KRTAP3-3Q9BYR6 98 aa4.63□□□□□ -1.67
SLC38A1-201ENST00000398637 KRTAP10-4P60372 401 aaPredicted RBP4.62□□□□□ -1.67
SLC38A1-201ENST00000398637 MT1HP80294 61 aa4.6□□□□□ -1.67
SLC38A1-201ENST00000398637 KRTAP3-2Q9BYR7 98 aa4.58□□□□□ -1.68
SLC38A1-201ENST00000398637 SPRR2DP22532 72 aa4.56□□□□□ -1.68
SLC38A1-201ENST00000398637 KRTAP23-1A1A580 65 aa4.53□□□□□ -1.68
SLC38A1-201ENST00000398637 ZNF469Q96JG9 3925 aaPredicted RBP4.52□□□□□ -1.69
SLC38A1-201ENST00000398637 DNAH1Q9P2D7 4330 aa4.49□□□□□ -1.69
SLC38A1-201ENST00000398637 LCE2BO14633 110 aa4.44□□□□□ -1.7
SLC38A1-201ENST00000398637 KRTAP19-5Q3LI72 72 aa4.42□□□□□ -1.7
SLC38A1-201ENST00000398637 MT2AP02795 61 aa4.41□□□□□ -1.7
SLC38A1-201ENST00000398637 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
SLC38A1-201ENST00000398637 KRTAP4-1Q9BYQ7 146 aa4.36□□□□□ -1.71
SLC38A1-201ENST00000398637 SPRR5A0A1B0GTR4 108 aa4.35□□□□□ -1.71
SLC38A1-201ENST00000398637 LCE3BQ5TA77 95 aa4.34□□□□□ -1.72
SLC38A1-201ENST00000398637 MT1FP04733 61 aa4.31□□□□□ -1.72
SLC38A1-201ENST00000398637 DNAH9Q9NYC9 4486 aa4.28□□□□□ -1.72
SLC38A1-201ENST00000398637 VPS13BQ7Z7G8 4022 aa4.27□□□□□ -1.73
SLC38A1-201ENST00000398637 LCE2CQ5TA81 110 aa4.26□□□□□ -1.73
SLC38A1-201ENST00000398637 LCE3CQ5T5A8 94 aa4.26□□□□□ -1.73
SLC38A1-201ENST00000398637 KMT2AQ03164 3969 aa4.25□□□□□ -1.73
SLC38A1-201ENST00000398637 SPRR2GQ9BYE4 73 aa4.25□□□□□ -1.73
SLC38A1-201ENST00000398637 DNAH2Q9P225 4427 aa4.23□□□□□ -1.73
SLC38A1-201ENST00000398637 FRAS1Q86XX4 4008 aa4.22□□□□□ -1.73
SLC38A1-201ENST00000398637 LCE2DQ5TA82 110 aaPredicted RBP4.21□□□□□ -1.74
SLC38A1-201ENST00000398637 ANK2Q01484 3957 aa4.19□□□□□ -1.74
SLC38A1-201ENST00000398637 LYSTQ99698 3801 aa4.19□□□□□ -1.74
SLC38A1-201ENST00000398637 DNAH7Q8WXX0 4024 aa4.17□□□□□ -1.74
SLC38A1-201ENST00000398637 DNAH3Q8TD57 4116 aa4.17□□□□□ -1.74
SLC38A1-201ENST00000398637 FAT2Q9NYQ8 4349 aa4.17□□□□□ -1.74
SLC38A1-201ENST00000398637 MT1GP13640 62 aa4.15□□□□□ -1.75
SLC38A1-201ENST00000398637 CMYA5Q8N3K9 4069 aa4.14□□□□□ -1.75
SLC38A1-201ENST00000398637 KRTAP17-1Q9BYP8 105 aa4.14□□□□□ -1.75
SLC38A1-201ENST00000398637 MT4P47944 62 aa4.12□□□□□ -1.75
SLC38A1-201ENST00000398637 KRTAP19-1Q8IUB9 90 aa4.08□□□□□ -1.76
SLC38A1-201ENST00000398637 DNAH10Q8IVF4 4471 aa4.02□□□□□ -1.77
SLC38A1-201ENST00000398637 PRKDCP78527 4128 aaKnown RBP4.02□□□□□ -1.77
SLC38A1-201ENST00000398637 DNAH17Q9UFH2 4485 aa4□□□□□ -1.77
SLC38A1-201ENST00000398637 DNAH6Q9C0G6 4158 aa4□□□□□ -1.77
SLC38A1-201ENST00000398637 DNAH5Q8TE73 4624 aa3.99□□□□□ -1.77
SLC38A1-201ENST00000398637 KRTAP19-4Q3LI73 84 aa3.98□□□□□ -1.77
SLC38A1-201ENST00000398637 KRTAP9-2Q9BYQ4 174 aa3.95□□□□□ -1.78
SLC38A1-201ENST00000398637 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
SLC38A1-201ENST00000398637 LCE1BQ5T7P3 118 aa3.91□□□□□ -1.78
SLC38A1-201ENST00000398637 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
SLC38A1-201ENST00000398637 DYNC2H1Q8NCM8 4307 aaKnown RBP3.89□□□□□ -1.79
SLC38A1-201ENST00000398637 PLECQ15149 4684 aaKnown RBP3.89□□□□□ -1.79
SLC38A1-201ENST00000398637 KRTAP4-8A0A0G2JLE6 195 aa3.89□□□□□ -1.79
SLC38A1-201ENST00000398637 KRTAP4-8Q9BYQ9 185 aa3.89□□□□□ -1.79
SLC38A1-201ENST00000398637 STARD9Q9P2P6 4700 aa3.87□□□□□ -1.79
SLC38A1-201ENST00000398637 DNAH11Q96DT5 4516 aa3.86□□□□□ -1.79
SLC38A1-201ENST00000398637 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
SLC38A1-201ENST00000398637 KRTAP9-6A0A140TA67 174 aa3.86□□□□□ -1.79
SLC38A1-201ENST00000398637 HECTD4Q9Y4D8 3996 aa3.85□□□□□ -1.79
SLC38A1-201ENST00000398637 LRP1BQ9NZR2 4599 aa3.85□□□□□ -1.79
SLC38A1-201ENST00000398637 KRTAP20-1Q3LI63 56 aa3.83□□□□□ -1.8
SLC38A1-201ENST00000398637 FAT1Q14517 4588 aa3.83□□□□□ -1.8
SLC38A1-201ENST00000398637 DNAH8Q96JB1 4490 aa3.81□□□□□ -1.8
SLC38A1-201ENST00000398637 MT1XP80297 61 aa3.81□□□□□ -1.8
SLC38A1-201ENST00000398637 KRTAP19-8Q3LI54 63 aa3.8□□□□□ -1.8
SLC38A1-201ENST00000398637 VPS13DQ5THJ4 4388 aa3.8□□□□□ -1.8
SLC38A1-201ENST00000398637 PKHD1L1Q86WI1 4243 aa3.76□□□□□ -1.81
SLC38A1-201ENST00000398637 KRTAP19-3Q7Z4W3 81 aa3.75□□□□□ -1.81
SLC38A1-201ENST00000398637 LCE5AQ5TCM9 118 aa3.75□□□□□ -1.81
SLC38A1-201ENST00000398637 PKHD1P08F94 4074 aa3.73□□□□□ -1.81
SLC38A1-201ENST00000398637 KRTAP9-8Q9BYQ0 159 aa3.71□□□□□ -1.82
SLC38A1-201ENST00000398637 LRP1Q07954 4544 aaKnown RBP3.69□□□□□ -1.82
SLC38A1-201ENST00000398637 MT1BP07438 61 aa3.68□□□□□ -1.82
SLC38A1-201ENST00000398637 MT3P25713 68 aa3.68□□□□□ -1.82
SLC38A1-201ENST00000398637 LPAP08519 4548 aa3.67□□□□□ -1.82
SLC38A1-201ENST00000398637 SACSQ9NZJ4 4579 aa3.67□□□□□ -1.82
SLC38A1-201ENST00000398637 KRTAP19-6Q3LI70 58 aa3.66□□□□□ -1.82
SLC38A1-201ENST00000398637 KRTAP9-3Q9BYQ3 159 aa3.65□□□□□ -1.82
SLC38A1-201ENST00000398637 APOBP04114 4563 aaKnown RBP3.65□□□□□ -1.82
SLC38A1-201ENST00000398637 KRTAP9-7A8MTY7 169 aa3.64□□□□□ -1.83
SLC38A1-201ENST00000398637 HSPG2P98160 4391 aa3.64□□□□□ -1.83
SLC38A1-201ENST00000398637 FAT3Q8TDW7 4589 aa3.61□□□□□ -1.83
SLC38A1-201ENST00000398637 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
SLC38A1-201ENST00000398637 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
SLC38A1-201ENST00000398637 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
SLC38A1-201ENST00000398637 LCE1AQ5T7P2 110 aa3.6□□□□□ -1.83
SLC38A1-201ENST00000398637 PKD1P98161 4303 aa3.59□□□□□ -1.83
SLC38A1-201ENST00000398637 DNHD1Q96M86 4753 aa3.59□□□□□ -1.84
SLC38A1-201ENST00000398637 KRTAP4-7Q9BYR0 210 aa3.57□□□□□ -1.84
SLC38A1-201ENST00000398637 RYR1P21817 5038 aa3.56□□□□□ -1.84
SLC38A1-201ENST00000398637 DYNC1H1Q14204 4646 aaKnown RBP3.56□□□□□ -1.84
SLC38A1-201ENST00000398637 FLGP20930 4061 aaPredicted RBP3.55□□□□□ -1.84
SLC38A1-201ENST00000398637 MT1LQ93083 61 aa3.54□□□□□ -1.84
SLC38A1-201ENST00000398637 MT1EP04732 61 aa3.5□□□□□ -1.85
SLC38A1-201ENST00000398637 TNXBP22105 4242 aa3.49□□□□□ -1.85
SLC38A1-201ENST00000398637 PRM1P04553 51 aa3.48□□□□□ -1.85
SLC38A1-201ENST00000398637 KRTAP2-3P0C7H8 128 aa3.47□□□□□ -1.85
SLC38A1-201ENST00000398637 MT1MQ8N339 61 aa3.47□□□□□ -1.85
SLC38A1-201ENST00000398637 KRTAP2-4Q9BYR9 128 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms