RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 DNAH8Q96JB1 4490 aa6.29□□□□□ -1.4
PUM3-202ENST00000397885 NDUFAF8A1L188 74 aa6.27□□□□□ -1.41
PUM3-202ENST00000397885 Q5VSD8 79 aa6.27□□□□□ -1.41
PUM3-202ENST00000397885 SMR3BP02814 79 aaPredicted RBP6.25□□□□□ -1.41
PUM3-202ENST00000397885 A0A0A0MQY5 61 aa6.25□□□□□ -1.41
PUM3-202ENST00000397885 COX6B2Q6YFQ2 88 aa6.22□□□□□ -1.41
PUM3-202ENST00000397885 TPRXLQ17RH7 258 aa6.21□□□□□ -1.41
PUM3-202ENST00000397885 RPL37P61927 97 aaKnown RBP6.21□□□□□ -1.42
PUM3-202ENST00000397885 KRTAP13-2Q52LG2 175 aa6.21□□□□□ -1.42
PUM3-202ENST00000397885 VPS13BQ7Z7G8 4022 aa6.18□□□□□ -1.42
PUM3-202ENST00000397885 FLG2Q5D862 2391 aaPredicted RBP6.16□□□□□ -1.42
PUM3-202ENST00000397885 FAT1Q14517 4588 aa6.16□□□□□ -1.42
PUM3-202ENST00000397885 KRTAP3-1Q9BYR8 98 aa6.15□□□□□ -1.42
PUM3-202ENST00000397885 KRTAP1-4P0C5Y4 121 aa6.12□□□□□ -1.43
PUM3-202ENST00000397885 J3QL48 77 aa6.1□□□□□ -1.43
PUM3-202ENST00000397885 KRTAP10-4P60372 401 aaPredicted RBP6.1□□□□□ -1.43
PUM3-202ENST00000397885 DMBT1Q9UGM3 2413 aaPredicted RBP6.04□□□□□ -1.44
PUM3-202ENST00000397885 RPS29P62273 56 aaKnown RBP6.04□□□□□ -1.44
PUM3-202ENST00000397885 C10orf95Q9H7T3 257 aa6.04□□□□□ -1.44
PUM3-202ENST00000397885 MYCBP2O75592 4640 aa6.03□□□□□ -1.44
PUM3-202ENST00000397885 HERC1Q15751 4861 aa6.02□□□□□ -1.45
PUM3-202ENST00000397885 KRTAP10-6P60371 365 aaPredicted RBP6.02□□□□□ -1.45
PUM3-202ENST00000397885 PKHD1L1Q86WI1 4243 aa6.01□□□□□ -1.45
PUM3-202ENST00000397885 KRTAP13-4Q3LI77 160 aa5.98□□□□□ -1.45
PUM3-202ENST00000397885 LUZP6Q538Z0 58 aa5.97□□□□□ -1.45
PUM3-202ENST00000397885 FAT3Q8TDW7 4589 aa5.96□□□□□ -1.46
PUM3-202ENST00000397885 A0A0D9SG42 100 aa5.96□□□□□ -1.46
PUM3-202ENST00000397885 S4R3F8 94 aa5.95□□□□□ -1.46
PUM3-202ENST00000397885 LRP1Q07954 4544 aaKnown RBP5.93□□□□□ -1.46
PUM3-202ENST00000397885 MT1HL1P0DM35 61 aa5.92□□□□□ -1.46
PUM3-202ENST00000397885 XP32Q5T750 250 aa5.92□□□□□ -1.46
PUM3-202ENST00000397885 KRTAP3-2Q9BYR7 98 aa5.92□□□□□ -1.46
PUM3-202ENST00000397885 C9orf92A6NGG3 77 aa5.88□□□□□ -1.47
PUM3-202ENST00000397885 KRTAP3-3Q9BYR6 98 aa5.87□□□□□ -1.47
PUM3-202ENST00000397885 KRTAP12-2P59991 146 aa5.86□□□□□ -1.47
PUM3-202ENST00000397885 KRTAP10-8P60410 259 aa5.85□□□□□ -1.47
PUM3-202ENST00000397885 HMCN2Q8NDA2 5059 aa5.85□□□□□ -1.47
PUM3-202ENST00000397885 KRTAP12-1P59990 96 aa5.81□□□□□ -1.48
PUM3-202ENST00000397885 TNXBP22105 4242 aa5.78□□□□□ -1.48
PUM3-202ENST00000397885 PLAC4Q8WY50 150 aa5.74□□□□□ -1.49
PUM3-202ENST00000397885 M0QZ58 72 aa5.71□□□□□ -1.5
PUM3-202ENST00000397885 UBR4Q5T4S7 5183 aa5.7□□□□□ -1.5
PUM3-202ENST00000397885 SEC61BP60468 96 aaKnown RBP5.68□□□□□ -1.5
PUM3-202ENST00000397885 LRP2P98164 4655 aa5.61□□□□□ -1.51
PUM3-202ENST00000397885 RNF213Q63HN8 5207 aa5.55□□□□□ -1.52
PUM3-202ENST00000397885 PP632Q6XCG6 107 aa5.53□□□□□ -1.52
PUM3-202ENST00000397885 LPAP08519 4548 aa5.52□□□□□ -1.53
PUM3-202ENST00000397885 CAMK2N1Q7Z7J9 78 aa5.45□□□□□ -1.54
PUM3-202ENST00000397885 MUC17Q685J3 4493 aa5.37□□□□□ -1.55
PUM3-202ENST00000397885 R4GN34 69 aa5.37□□□□□ -1.55
PUM3-202ENST00000397885 SPRR5A0A1B0GTR4 108 aa5.33□□□□□ -1.56
PUM3-202ENST00000397885 PRO2289Q9P1D8 64 aa5.31□□□□□ -1.56
PUM3-202ENST00000397885 MUC2Q02817 5179 aa5.3□□□□□ -1.56
PUM3-202ENST00000397885 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
PUM3-202ENST00000397885 LCE2AQ5TA79 106 aaPredicted RBP5.26□□□□□ -1.57
PUM3-202ENST00000397885 FAT4Q6V0I7 4981 aa5.25□□□□□ -1.57
PUM3-202ENST00000397885 KRTAP4-1Q9BYQ7 146 aa5.2□□□□□ -1.58
PUM3-202ENST00000397885 INE1O15225 51 aa5.18□□□□□ -1.58
PUM3-202ENST00000397885 KRTAP9-2Q9BYQ4 174 aa5.14□□□□□ -1.59
PUM3-202ENST00000397885 LORP23490 312 aaPredicted RBP5.1□□□□□ -1.59
PUM3-202ENST00000397885 LCE2CQ5TA81 110 aa5.09□□□□□ -1.59
PUM3-202ENST00000397885 TNP1P09430 55 aa5.08□□□□□ -1.6
PUM3-202ENST00000397885 KRTAP19-2Q3LHN2 52 aa5.07□□□□□ -1.6
PUM3-202ENST00000397885 MT1HP80294 61 aa5.03□□□□□ -1.6
PUM3-202ENST00000397885 LCE2DQ5TA82 110 aaPredicted RBP5.02□□□□□ -1.61
PUM3-202ENST00000397885 KRTAP9-6A0A140TA67 174 aa4.98□□□□□ -1.61
PUM3-202ENST00000397885 M0R2T5 61 aa4.96□□□□□ -1.62
PUM3-202ENST00000397885 CRCT1Q9UGL9 99 aa4.87□□□□□ -1.63
PUM3-202ENST00000397885 FLGP20930 4061 aaPredicted RBP4.86□□□□□ -1.63
PUM3-202ENST00000397885 KRTAP9-8Q9BYQ0 159 aa4.76□□□□□ -1.65
PUM3-202ENST00000397885 FSIP2Q5CZC0 6907 aa4.75□□□□□ -1.65
PUM3-202ENST00000397885 MT2AP02795 61 aa4.69□□□□□ -1.66
PUM3-202ENST00000397885 LCE3AQ5TA76 89 aa4.67□□□□□ -1.66
PUM3-202ENST00000397885 KRTAP10-10P60014 251 aa4.64□□□□□ -1.67
PUM3-202ENST00000397885 KRTAP8-1Q8IUC2 63 aa4.64□□□□□ -1.67
PUM3-202ENST00000397885 MT1FP04733 61 aa4.64□□□□□ -1.67
PUM3-202ENST00000397885 KRTAP9-3Q9BYQ3 159 aa4.61□□□□□ -1.67
PUM3-202ENST00000397885 USH2AO75445 5202 aa4.61□□□□□ -1.67
PUM3-202ENST00000397885 SPRR2GQ9BYE4 73 aa4.61□□□□□ -1.67
PUM3-202ENST00000397885 LCE2BO14633 110 aa4.58□□□□□ -1.68
PUM3-202ENST00000397885 SSPOA2VEC9 5147 aa4.57□□□□□ -1.68
PUM3-202ENST00000397885 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.52□□□□□ -1.69
PUM3-202ENST00000397885 KRTAP19-1Q8IUB9 90 aa4.52□□□□□ -1.69
PUM3-202ENST00000397885 KRTAP10-12P60413 245 aa4.51□□□□□ -1.69
PUM3-202ENST00000397885 KRTAP9-7A8MTY7 169 aa4.47□□□□□ -1.69
PUM3-202ENST00000397885 KRTAP12-3P60328 96 aa4.46□□□□□ -1.7
PUM3-202ENST00000397885 KRTAP19-6Q3LI70 58 aa4.45□□□□□ -1.7
PUM3-202ENST00000397885 FCGBPQ9Y6R7 5405 aaPredicted RBP4.45□□□□□ -1.7
PUM3-202ENST00000397885 KRTAP19-8Q3LI54 63 aa4.37□□□□□ -1.71
PUM3-202ENST00000397885 KRTAP10-5P60370 271 aa4.36□□□□□ -1.71
PUM3-202ENST00000397885 MACF1Q9UPN3 7388 aaKnown RBP4.31□□□□□ -1.72
PUM3-202ENST00000397885 MT1XP80297 61 aa4.28□□□□□ -1.72
PUM3-202ENST00000397885 MT1BP07438 61 aa4.28□□□□□ -1.72
PUM3-202ENST00000397885 SYNE2Q8WXH0 6885 aaKnown RBP4.26□□□□□ -1.73
PUM3-202ENST00000397885 KRTAP6-3Q3LI67 103 aa4.26□□□□□ -1.73
PUM3-202ENST00000397885 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
PUM3-202ENST00000397885 KRTAP2-3P0C7H8 128 aa4.22□□□□□ -1.73
PUM3-202ENST00000397885 KRTAP2-4Q9BYR9 128 aa4.22□□□□□ -1.73
PUM3-202ENST00000397885 KRTAP2-1Q9BYU5 128 aa4.22□□□□□ -1.73
PUM3-202ENST00000397885 KRTAP10-7P60409 375 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms