RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 KRTAP10-8P60410 259 aa5.46□□□□□ -1.54
CPSF1P1-201ENST00000397477 RYR2Q92736 4967 aa5.45□□□□□ -1.54
CPSF1P1-201ENST00000397477 H1FX-AS1Q4G0G2 97 aa5.45□□□□□ -1.54
CPSF1P1-201ENST00000397477 RPL37P61927 97 aaKnown RBP5.44□□□□□ -1.54
CPSF1P1-201ENST00000397477 H0YAA0 97 aa5.43□□□□□ -1.54
CPSF1P1-201ENST00000397477 S4R3F8 94 aa5.43□□□□□ -1.54
CPSF1P1-201ENST00000397477 FAT3Q8TDW7 4589 aa5.42□□□□□ -1.54
CPSF1P1-201ENST00000397477 J3QL48 77 aa5.41□□□□□ -1.54
CPSF1P1-201ENST00000397477 ROMO1P60602 79 aa5.41□□□□□ -1.54
CPSF1P1-201ENST00000397477 SPINT4Q6UDR6 99 aa5.41□□□□□ -1.54
CPSF1P1-201ENST00000397477 RYR3Q15413 4870 aa5.4□□□□□ -1.55
CPSF1P1-201ENST00000397477 KRTAP17-1Q9BYP8 105 aa5.38□□□□□ -1.55
CPSF1P1-201ENST00000397477 RYR1P21817 5038 aa5.37□□□□□ -1.55
CPSF1P1-201ENST00000397477 KRTAP25-1Q3LHN0 102 aa5.36□□□□□ -1.55
CPSF1P1-201ENST00000397477 MT1HL1P0DM35 61 aa5.31□□□□□ -1.56
CPSF1P1-201ENST00000397477 KRTAP4-5Q9BYR2 181 aa5.31□□□□□ -1.56
CPSF1P1-201ENST00000397477 P0C880 135 aa5.3□□□□□ -1.56
CPSF1P1-201ENST00000397477 HSPG2P98160 4391 aa5.3□□□□□ -1.56
CPSF1P1-201ENST00000397477 PKHD1L1Q86WI1 4243 aa5.29□□□□□ -1.56
CPSF1P1-201ENST00000397477 A0A0A0MQY5 61 aa5.28□□□□□ -1.56
CPSF1P1-201ENST00000397477 NDUFAF8A1L188 74 aa5.24□□□□□ -1.57
CPSF1P1-201ENST00000397477 KRTAP3-3Q9BYR6 98 aa5.24□□□□□ -1.57
CPSF1P1-201ENST00000397477 KRTAP13-4Q3LI77 160 aa5.23□□□□□ -1.57
CPSF1P1-201ENST00000397477 LRP2P98164 4655 aa5.23□□□□□ -1.57
CPSF1P1-201ENST00000397477 KRTAP10-6P60371 365 aaPredicted RBP5.21□□□□□ -1.58
CPSF1P1-201ENST00000397477 EPPK1P58107 5090 aaKnown RBP5.21□□□□□ -1.58
CPSF1P1-201ENST00000397477 TNXBP22105 4242 aa5.19□□□□□ -1.58
CPSF1P1-201ENST00000397477 TPRXLQ17RH7 258 aa5.19□□□□□ -1.58
CPSF1P1-201ENST00000397477 M0QZ58 72 aa5.18□□□□□ -1.58
CPSF1P1-201ENST00000397477 SEC61BP60468 96 aaKnown RBP5.17□□□□□ -1.58
CPSF1P1-201ENST00000397477 LPAP08519 4548 aa5.17□□□□□ -1.58
CPSF1P1-201ENST00000397477 R4GN34 69 aa5.17□□□□□ -1.58
CPSF1P1-201ENST00000397477 C10orf95Q9H7T3 257 aa5.15□□□□□ -1.58
CPSF1P1-201ENST00000397477 KRTAP3-2Q9BYR7 98 aa5.15□□□□□ -1.59
CPSF1P1-201ENST00000397477 KRTAP12-2P59991 146 aa5.1□□□□□ -1.59
CPSF1P1-201ENST00000397477 ABCA13Q86UQ4 5058 aa5.09□□□□□ -1.59
CPSF1P1-201ENST00000397477 HERC2O95714 4834 aa5.01□□□□□ -1.61
CPSF1P1-201ENST00000397477 KRTAP12-1P59990 96 aa5□□□□□ -1.61
CPSF1P1-201ENST00000397477 CAMK2N1Q7Z7J9 78 aa5□□□□□ -1.61
CPSF1P1-201ENST00000397477 PCLOQ9Y6V0 5065 aa4.99□□□□□ -1.61
CPSF1P1-201ENST00000397477 KRTAP4-1Q9BYQ7 146 aa4.98□□□□□ -1.61
CPSF1P1-201ENST00000397477 MUC2Q02817 5179 aa4.97□□□□□ -1.61
CPSF1P1-201ENST00000397477 M0R2T5 61 aa4.96□□□□□ -1.61
CPSF1P1-201ENST00000397477 LUZP6Q538Z0 58 aa4.95□□□□□ -1.62
CPSF1P1-201ENST00000397477 LORP23490 312 aaPredicted RBP4.95□□□□□ -1.62
CPSF1P1-201ENST00000397477 HERC1Q15751 4861 aa4.88□□□□□ -1.63
CPSF1P1-201ENST00000397477 BIRC6Q9NR09 4857 aa4.87□□□□□ -1.63
CPSF1P1-201ENST00000397477 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
CPSF1P1-201ENST00000397477 RNF213Q63HN8 5207 aa4.82□□□□□ -1.64
CPSF1P1-201ENST00000397477 FSIP2Q5CZC0 6907 aa4.8□□□□□ -1.64
CPSF1P1-201ENST00000397477 UBR4Q5T4S7 5183 aa4.76□□□□□ -1.65
CPSF1P1-201ENST00000397477 FAT4Q6V0I7 4981 aa4.73□□□□□ -1.65
CPSF1P1-201ENST00000397477 PLAC4Q8WY50 150 aa4.68□□□□□ -1.66
CPSF1P1-201ENST00000397477 MUC17Q685J3 4493 aa4.67□□□□□ -1.66
CPSF1P1-201ENST00000397477 KRTAP10-10P60014 251 aa4.66□□□□□ -1.66
CPSF1P1-201ENST00000397477 TNP1P09430 55 aa4.62□□□□□ -1.67
CPSF1P1-201ENST00000397477 KRTAP19-2Q3LHN2 52 aa4.61□□□□□ -1.67
CPSF1P1-201ENST00000397477 HMCN2Q8NDA2 5059 aa4.55□□□□□ -1.68
CPSF1P1-201ENST00000397477 FLGP20930 4061 aaPredicted RBP4.55□□□□□ -1.68
CPSF1P1-201ENST00000397477 PP632Q6XCG6 107 aa4.49□□□□□ -1.69
CPSF1P1-201ENST00000397477 MT1HP80294 61 aa4.48□□□□□ -1.69
CPSF1P1-201ENST00000397477 LCE2CQ5TA81 110 aa4.47□□□□□ -1.69
CPSF1P1-201ENST00000397477 MT1FP04733 61 aa4.42□□□□□ -1.7
CPSF1P1-201ENST00000397477 MT2AP02795 61 aa4.41□□□□□ -1.7
CPSF1P1-201ENST00000397477 KRTAP19-1Q8IUB9 90 aa4.4□□□□□ -1.71
CPSF1P1-201ENST00000397477 SPRR2GQ9BYE4 73 aa4.35□□□□□ -1.71
CPSF1P1-201ENST00000397477 LCE3AQ5TA76 89 aa4.33□□□□□ -1.72
CPSF1P1-201ENST00000397477 KRTAP9-8Q9BYQ0 159 aa4.29□□□□□ -1.72
CPSF1P1-201ENST00000397477 USH2AO75445 5202 aa4.21□□□□□ -1.74
CPSF1P1-201ENST00000397477 KRTAP10-12P60413 245 aa4.19□□□□□ -1.74
CPSF1P1-201ENST00000397477 PRO2289Q9P1D8 64 aa4.18□□□□□ -1.74
CPSF1P1-201ENST00000397477 MT1BP07438 61 aa4.18□□□□□ -1.74
CPSF1P1-201ENST00000397477 MT1XP80297 61 aa4.14□□□□□ -1.75
CPSF1P1-201ENST00000397477 KRTAP10-5P60370 271 aa4.13□□□□□ -1.75
CPSF1P1-201ENST00000397477 KRTAP10-7P60409 375 aaPredicted RBP4.13□□□□□ -1.75
CPSF1P1-201ENST00000397477 KRTAP12-3P60328 96 aa4.13□□□□□ -1.75
CPSF1P1-201ENST00000397477 KRTAP19-8Q3LI54 63 aa4.12□□□□□ -1.75
CPSF1P1-201ENST00000397477 KRTAP23-1A1A580 65 aa4.12□□□□□ -1.75
CPSF1P1-201ENST00000397477 KRTAP9-3Q9BYQ3 159 aa4.1□□□□□ -1.75
CPSF1P1-201ENST00000397477 KMT2DO14686 5537 aa4.08□□□□□ -1.76
CPSF1P1-201ENST00000397477 LCE2BO14633 110 aa4.03□□□□□ -1.76
CPSF1P1-201ENST00000397477 KRTAP8-1Q8IUC2 63 aa4.02□□□□□ -1.77
CPSF1P1-201ENST00000397477 KRTAP4-8A0A0G2JLE6 195 aa3.99□□□□□ -1.77
CPSF1P1-201ENST00000397477 KRTAP4-8Q9BYQ9 185 aa3.99□□□□□ -1.77
CPSF1P1-201ENST00000397477 KRTAP19-5Q3LI72 72 aa3.97□□□□□ -1.77
CPSF1P1-201ENST00000397477 INE1O15225 51 aa3.94□□□□□ -1.78
CPSF1P1-201ENST00000397477 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
CPSF1P1-201ENST00000397477 LCE2AQ5TA79 106 aaPredicted RBP3.86□□□□□ -1.79
CPSF1P1-201ENST00000397477 KRTAP9-2Q9BYQ4 174 aa3.82□□□□□ -1.8
CPSF1P1-201ENST00000397477 SSPOA2VEC9 5147 aa3.82□□□□□ -1.8
CPSF1P1-201ENST00000397477 KRTAP4-7Q9BYR0 210 aa3.81□□□□□ -1.8
CPSF1P1-201ENST00000397477 DSTQ03001 7570 aaKnown RBP3.81□□□□□ -1.8
CPSF1P1-201ENST00000397477 KRTAP9-6A0A140TA67 174 aa3.8□□□□□ -1.8
CPSF1P1-201ENST00000397477 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
CPSF1P1-201ENST00000397477 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
CPSF1P1-201ENST00000397477 CRCT1Q9UGL9 99 aa3.77□□□□□ -1.81
CPSF1P1-201ENST00000397477 SYNE2Q8WXH0 6885 aaKnown RBP3.77□□□□□ -1.81
CPSF1P1-201ENST00000397477 KRTAP19-7Q3SYF9 63 aa3.66□□□□□ -1.82
CPSF1P1-201ENST00000397477 MUC12Q9UKN1 5478 aa3.65□□□□□ -1.83
CPSF1P1-201ENST00000397477 FCGBPQ9Y6R7 5405 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 728 ms