RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 KRTAP16-1A8MUX0 517 aa5.16□□□□□ -1.58
NDE1-201ENST00000396354 KRTAP10-4P60372 401 aaPredicted RBP5.16□□□□□ -1.58
NDE1-201ENST00000396354 LINC00304Q8N9R0 145 aa5.16□□□□□ -1.58
NDE1-201ENST00000396354 FAT3Q8TDW7 4589 aa5.15□□□□□ -1.59
NDE1-201ENST00000396354 KIAA1109Q2LD37 5005 aa5.15□□□□□ -1.59
NDE1-201ENST00000396354 RYR1P21817 5038 aa5.14□□□□□ -1.59
NDE1-201ENST00000396354 UQCR11O14957 56 aa5.14□□□□□ -1.59
NDE1-201ENST00000396354 CRIPTQ9P021 101 aa5.12□□□□□ -1.59
NDE1-201ENST00000396354 KRTAP17-1Q9BYP8 105 aa5.09□□□□□ -1.59
NDE1-201ENST00000396354 SPATA8Q6RVD6 105 aa5.07□□□□□ -1.6
NDE1-201ENST00000396354 CSAG1Q6PB30 78 aa5.06□□□□□ -1.6
NDE1-201ENST00000396354 Q5VSD8 79 aa5.03□□□□□ -1.6
NDE1-201ENST00000396354 BIRC6Q9NR09 4857 aa5.01□□□□□ -1.61
NDE1-201ENST00000396354 A0A0D9SG42 100 aa5.01□□□□□ -1.61
NDE1-201ENST00000396354 H0YAA0 97 aa4.98□□□□□ -1.61
NDE1-201ENST00000396354 LPAP08519 4548 aa4.98□□□□□ -1.61
NDE1-201ENST00000396354 KRTAP4-5Q9BYR2 181 aa4.97□□□□□ -1.61
NDE1-201ENST00000396354 A0A1B0GU33 70 aa4.97□□□□□ -1.61
NDE1-201ENST00000396354 XP32Q5T750 250 aa4.97□□□□□ -1.61
NDE1-201ENST00000396354 ABCA13Q86UQ4 5058 aa4.95□□□□□ -1.62
NDE1-201ENST00000396354 RPS29P62273 56 aaKnown RBP4.93□□□□□ -1.62
NDE1-201ENST00000396354 HERC2O95714 4834 aa4.93□□□□□ -1.62
NDE1-201ENST00000396354 SEC61BP60468 96 aaKnown RBP4.91□□□□□ -1.62
NDE1-201ENST00000396354 LRP2P98164 4655 aa4.9□□□□□ -1.63
NDE1-201ENST00000396354 ROMO1P60602 79 aa4.89□□□□□ -1.63
NDE1-201ENST00000396354 A8MUU9 505 aa4.88□□□□□ -1.63
NDE1-201ENST00000396354 H1FX-AS1Q4G0G2 97 aa4.88□□□□□ -1.63
NDE1-201ENST00000396354 C20orf166-AS1Q96NR2 134 aa4.88□□□□□ -1.63
NDE1-201ENST00000396354 KRTAP10-8P60410 259 aa4.87□□□□□ -1.63
NDE1-201ENST00000396354 COX6B2Q6YFQ2 88 aa4.86□□□□□ -1.63
NDE1-201ENST00000396354 K7ERS5 55 aa4.83□□□□□ -1.64
NDE1-201ENST00000396354 MT1HL1P0DM35 61 aa4.82□□□□□ -1.64
NDE1-201ENST00000396354 P0C880 135 aa4.8□□□□□ -1.64
NDE1-201ENST00000396354 KRTAP25-1Q3LHN0 102 aa4.78□□□□□ -1.64
NDE1-201ENST00000396354 KRTAP13-4Q3LI77 160 aa4.78□□□□□ -1.64
NDE1-201ENST00000396354 SPINT4Q6UDR6 99 aa4.78□□□□□ -1.64
NDE1-201ENST00000396354 C10orf95Q9H7T3 257 aa4.78□□□□□ -1.64
NDE1-201ENST00000396354 PCLOQ9Y6V0 5065 aa4.78□□□□□ -1.64
NDE1-201ENST00000396354 S4R3F8 94 aa4.75□□□□□ -1.65
NDE1-201ENST00000396354 RPL37P61927 97 aaKnown RBP4.71□□□□□ -1.66
NDE1-201ENST00000396354 KRTAP10-6P60371 365 aaPredicted RBP4.7□□□□□ -1.66
NDE1-201ENST00000396354 KRTAP19-1Q8IUB9 90 aa4.7□□□□□ -1.66
NDE1-201ENST00000396354 LOC100996750A0A140TA64 210 aa4.69□□□□□ -1.66
NDE1-201ENST00000396354 KRTAP4-6Q9BYQ5 205 aa4.69□□□□□ -1.66
NDE1-201ENST00000396354 HERC1Q15751 4861 aa4.68□□□□□ -1.66
NDE1-201ENST00000396354 MUC17Q685J3 4493 aa4.68□□□□□ -1.66
NDE1-201ENST00000396354 MUC2Q02817 5179 aa4.67□□□□□ -1.66
NDE1-201ENST00000396354 KRTAP12-2P59991 146 aa4.64□□□□□ -1.67
NDE1-201ENST00000396354 KRTAP15-1Q3LI76 137 aa4.64□□□□□ -1.67
NDE1-201ENST00000396354 NDUFAF8A1L188 74 aa4.63□□□□□ -1.67
NDE1-201ENST00000396354 TPRXLQ17RH7 258 aa4.62□□□□□ -1.67
NDE1-201ENST00000396354 KRTAP9-6A0A140TA67 174 aa4.61□□□□□ -1.67
NDE1-201ENST00000396354 KRTAP9-7A8MTY7 169 aa4.61□□□□□ -1.67
NDE1-201ENST00000396354 KRTAP4-12Q9BQ66 201 aa4.61□□□□□ -1.67
NDE1-201ENST00000396354 M0QZ58 72 aa4.56□□□□□ -1.68
NDE1-201ENST00000396354 HMCN2Q8NDA2 5059 aa4.54□□□□□ -1.68
NDE1-201ENST00000396354 KRTAP4-8Q9BYQ9 185 aa4.54□□□□□ -1.68
NDE1-201ENST00000396354 LCE4AQ5TA78 99 aa4.53□□□□□ -1.68
NDE1-201ENST00000396354 R4GN34 69 aa4.52□□□□□ -1.69
NDE1-201ENST00000396354 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
NDE1-201ENST00000396354 KRTAP4-1Q9BYQ7 146 aa4.51□□□□□ -1.69
NDE1-201ENST00000396354 KRTAP12-1P59990 96 aa4.51□□□□□ -1.69
NDE1-201ENST00000396354 KRTAP9-9Q9BYP9 154 aa4.47□□□□□ -1.69
NDE1-201ENST00000396354 FLGP20930 4061 aaPredicted RBP4.44□□□□□ -1.7
NDE1-201ENST00000396354 FAT4Q6V0I7 4981 aa4.43□□□□□ -1.7
NDE1-201ENST00000396354 KRTAP9-3Q9BYQ3 159 aa4.42□□□□□ -1.7
NDE1-201ENST00000396354 KRTAP9-2Q9BYQ4 174 aa4.42□□□□□ -1.7
NDE1-201ENST00000396354 KRTAP19-2Q3LHN2 52 aa4.4□□□□□ -1.71
NDE1-201ENST00000396354 UBR4Q5T4S7 5183 aa4.4□□□□□ -1.71
NDE1-201ENST00000396354 LUZP6Q538Z0 58 aa4.4□□□□□ -1.71
NDE1-201ENST00000396354 RNF213Q63HN8 5207 aa4.38□□□□□ -1.71
NDE1-201ENST00000396354 CAMK2N1Q7Z7J9 78 aa4.37□□□□□ -1.71
NDE1-201ENST00000396354 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.36□□□□□ -1.71
NDE1-201ENST00000396354 LCE3BQ5TA77 95 aa4.32□□□□□ -1.72
NDE1-201ENST00000396354 LCE5AQ5TCM9 118 aa4.25□□□□□ -1.73
NDE1-201ENST00000396354 PLAC4Q8WY50 150 aa4.21□□□□□ -1.74
NDE1-201ENST00000396354 M0R2T5 61 aa4.19□□□□□ -1.74
NDE1-201ENST00000396354 LCE1DQ5T752 114 aa4.09□□□□□ -1.75
NDE1-201ENST00000396354 MT1HP80294 61 aa4.06□□□□□ -1.76
NDE1-201ENST00000396354 TNP1P09430 55 aa4.04□□□□□ -1.76
NDE1-201ENST00000396354 KRTAP4-8A0A0G2JLE6 195 aa4.03□□□□□ -1.76
NDE1-201ENST00000396354 KRTAP10-10P60014 251 aa3.97□□□□□ -1.77
NDE1-201ENST00000396354 USH2AO75445 5202 aa3.97□□□□□ -1.77
NDE1-201ENST00000396354 MT1FP04733 61 aa3.96□□□□□ -1.78
NDE1-201ENST00000396354 PP632Q6XCG6 107 aa3.95□□□□□ -1.78
NDE1-201ENST00000396354 MT2AP02795 61 aa3.94□□□□□ -1.78
NDE1-201ENST00000396354 KRTAP9-8Q9BYQ0 159 aa3.94□□□□□ -1.78
NDE1-201ENST00000396354 KRTAP4-9Q9BYQ8 210 aa3.91□□□□□ -1.78
NDE1-201ENST00000396354 LCE1AQ5T7P2 110 aa3.91□□□□□ -1.78
NDE1-201ENST00000396354 SPRR2GQ9BYE4 73 aa3.91□□□□□ -1.78
NDE1-201ENST00000396354 KMT2DO14686 5537 aa3.88□□□□□ -1.79
NDE1-201ENST00000396354 LCE3AQ5TA76 89 aa3.87□□□□□ -1.79
NDE1-201ENST00000396354 KRTAP4-7Q9BYR0 210 aa3.86□□□□□ -1.79
NDE1-201ENST00000396354 FSIP2Q5CZC0 6907 aa3.85□□□□□ -1.79
NDE1-201ENST00000396354 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
NDE1-201ENST00000396354 MT1BP07438 61 aa3.79□□□□□ -1.8
NDE1-201ENST00000396354 PRO2289Q9P1D8 64 aa3.77□□□□□ -1.81
NDE1-201ENST00000396354 MT3P25713 68 aa3.76□□□□□ -1.81
NDE1-201ENST00000396354 KRTAP19-8Q3LI54 63 aa3.76□□□□□ -1.81
NDE1-201ENST00000396354 MT1XP80297 61 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms