RNA–Protein interactions for RNA: ENST00000395503.8

ATP2A1-202, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2A1, Length 3,536 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-202ENST00000395503 RYR2Q92736 4967 aa6.03□□□□□ -1.44
ATP2A1-202ENST00000395503 KRTAP10-8P60410 259 aa6.02□□□□□ -1.45
ATP2A1-202ENST00000395503 FAT3Q8TDW7 4589 aa6.01□□□□□ -1.45
ATP2A1-202ENST00000395503 K7ERS5 55 aa6□□□□□ -1.45
ATP2A1-202ENST00000395503 SPINT4Q6UDR6 99 aa5.99□□□□□ -1.45
ATP2A1-202ENST00000395503 Q5VSD8 79 aa5.99□□□□□ -1.45
ATP2A1-202ENST00000395503 ROMO1P60602 79 aa5.98□□□□□ -1.45
ATP2A1-202ENST00000395503 KRTAP25-1Q3LHN0 102 aa5.96□□□□□ -1.45
ATP2A1-202ENST00000395503 KRTAP13-4Q3LI77 160 aa5.96□□□□□ -1.46
ATP2A1-202ENST00000395503 KRTAP3-3Q9BYR6 98 aa5.94□□□□□ -1.46
ATP2A1-202ENST00000395503 XP32Q5T750 250 aa5.94□□□□□ -1.46
ATP2A1-202ENST00000395503 KIAA1109Q2LD37 5005 aa5.93□□□□□ -1.46
ATP2A1-202ENST00000395503 TNXBP22105 4242 aa5.93□□□□□ -1.46
ATP2A1-202ENST00000395503 KRTAP10-6P60371 365 aaPredicted RBP5.92□□□□□ -1.46
ATP2A1-202ENST00000395503 RPL37P61927 97 aaKnown RBP5.92□□□□□ -1.46
ATP2A1-202ENST00000395503 S4R3F8 94 aa5.92□□□□□ -1.46
ATP2A1-202ENST00000395503 P0C880 135 aa5.92□□□□□ -1.46
ATP2A1-202ENST00000395503 LPAP08519 4548 aa5.91□□□□□ -1.46
ATP2A1-202ENST00000395503 KRTAP17-1Q9BYP8 105 aa5.9□□□□□ -1.47
ATP2A1-202ENST00000395503 NDUFAF8A1L188 74 aa5.88□□□□□ -1.47
ATP2A1-202ENST00000395503 RYR3Q15413 4870 aa5.86□□□□□ -1.47
ATP2A1-202ENST00000395503 KRTAP3-2Q9BYR7 98 aa5.86□□□□□ -1.47
ATP2A1-202ENST00000395503 LRP2P98164 4655 aa5.85□□□□□ -1.47
ATP2A1-202ENST00000395503 C10orf95Q9H7T3 257 aa5.85□□□□□ -1.47
ATP2A1-202ENST00000395503 KRTAP21-3Q3LHN1 58 aa5.82□□□□□ -1.48
ATP2A1-202ENST00000395503 RYR1P21817 5038 aa5.82□□□□□ -1.48
ATP2A1-202ENST00000395503 KRTAP12-2P59991 146 aa5.77□□□□□ -1.49
ATP2A1-202ENST00000395503 TPRXLQ17RH7 258 aa5.77□□□□□ -1.49
ATP2A1-202ENST00000395503 MT1HL1P0DM35 61 aa5.75□□□□□ -1.49
ATP2A1-202ENST00000395503 ABCA13Q86UQ4 5058 aa5.73□□□□□ -1.49
ATP2A1-202ENST00000395503 EPPK1P58107 5090 aaKnown RBP5.7□□□□□ -1.5
ATP2A1-202ENST00000395503 KRTAP12-1P59990 96 aa5.66□□□□□ -1.5
ATP2A1-202ENST00000395503 KRTAP4-5Q9BYR2 181 aa5.62□□□□□ -1.51
ATP2A1-202ENST00000395503 M0QZ58 72 aa5.62□□□□□ -1.51
ATP2A1-202ENST00000395503 LUZP6Q538Z0 58 aa5.58□□□□□ -1.52
ATP2A1-202ENST00000395503 R4GN34 69 aa5.57□□□□□ -1.52
ATP2A1-202ENST00000395503 J3QL48 77 aa5.53□□□□□ -1.52
ATP2A1-202ENST00000395503 MUC2Q02817 5179 aa5.53□□□□□ -1.52
ATP2A1-202ENST00000395503 LORP23490 312 aaPredicted RBP5.53□□□□□ -1.52
ATP2A1-202ENST00000395503 KRTAP4-1Q9BYQ7 146 aa5.46□□□□□ -1.54
ATP2A1-202ENST00000395503 SEC61BP60468 96 aaKnown RBP5.43□□□□□ -1.54
ATP2A1-202ENST00000395503 KRTAP15-1Q3LI76 137 aa5.42□□□□□ -1.54
ATP2A1-202ENST00000395503 HERC2O95714 4834 aa5.39□□□□□ -1.55
ATP2A1-202ENST00000395503 MUC17Q685J3 4493 aa5.39□□□□□ -1.55
ATP2A1-202ENST00000395503 CAMK2N1Q7Z7J9 78 aa5.35□□□□□ -1.55
ATP2A1-202ENST00000395503 FAT4Q6V0I7 4981 aa5.25□□□□□ -1.57
ATP2A1-202ENST00000395503 PLAC4Q8WY50 150 aa5.24□□□□□ -1.57
ATP2A1-202ENST00000395503 HERC1Q15751 4861 aa5.23□□□□□ -1.57
ATP2A1-202ENST00000395503 KRTAP19-2Q3LHN2 52 aa5.2□□□□□ -1.58
ATP2A1-202ENST00000395503 PCLOQ9Y6V0 5065 aa5.2□□□□□ -1.58
ATP2A1-202ENST00000395503 RNF213Q63HN8 5207 aa5.14□□□□□ -1.59
ATP2A1-202ENST00000395503 FLGP20930 4061 aaPredicted RBP5.1□□□□□ -1.59
ATP2A1-202ENST00000395503 BIRC6Q9NR09 4857 aa5.08□□□□□ -1.6
ATP2A1-202ENST00000395503 M0R2T5 61 aa5.07□□□□□ -1.6
ATP2A1-202ENST00000395503 TNP1P09430 55 aa5.03□□□□□ -1.6
ATP2A1-202ENST00000395503 PP632Q6XCG6 107 aa5.02□□□□□ -1.61
ATP2A1-202ENST00000395503 HMCN2Q8NDA2 5059 aa5.01□□□□□ -1.61
ATP2A1-202ENST00000395503 UBR4Q5T4S7 5183 aa5.01□□□□□ -1.61
ATP2A1-202ENST00000395503 LCE2CQ5TA81 110 aa4.92□□□□□ -1.62
ATP2A1-202ENST00000395503 KRTAP10-10P60014 251 aa4.89□□□□□ -1.63
ATP2A1-202ENST00000395503 KRTAP19-1Q8IUB9 90 aa4.88□□□□□ -1.63
ATP2A1-202ENST00000395503 MT1HP80294 61 aa4.81□□□□□ -1.64
ATP2A1-202ENST00000395503 LCE3AQ5TA76 89 aa4.81□□□□□ -1.64
ATP2A1-202ENST00000395503 SPRR2GQ9BYE4 73 aa4.81□□□□□ -1.64
ATP2A1-202ENST00000395503 MT1FP04733 61 aa4.81□□□□□ -1.64
ATP2A1-202ENST00000395503 MT2AP02795 61 aa4.77□□□□□ -1.65
ATP2A1-202ENST00000395503 KRTAP23-1A1A580 65 aa4.7□□□□□ -1.66
ATP2A1-202ENST00000395503 KRTAP9-8Q9BYQ0 159 aa4.69□□□□□ -1.66
ATP2A1-202ENST00000395503 SPRR5A0A1B0GTR4 108 aa4.66□□□□□ -1.66
ATP2A1-202ENST00000395503 USH2AO75445 5202 aa4.65□□□□□ -1.67
ATP2A1-202ENST00000395503 MT1BP07438 61 aa4.6□□□□□ -1.67
ATP2A1-202ENST00000395503 KRTAP10-5P60370 271 aa4.6□□□□□ -1.67
ATP2A1-202ENST00000395503 MT1XP80297 61 aa4.59□□□□□ -1.67
ATP2A1-202ENST00000395503 KMT2DO14686 5537 aa4.58□□□□□ -1.68
ATP2A1-202ENST00000395503 KRTAP10-7P60409 375 aaPredicted RBP4.56□□□□□ -1.68
ATP2A1-202ENST00000395503 KRTAP10-12P60413 245 aa4.56□□□□□ -1.68
ATP2A1-202ENST00000395503 KRTAP19-8Q3LI54 63 aa4.55□□□□□ -1.68
ATP2A1-202ENST00000395503 KRTAP12-3P60328 96 aa4.55□□□□□ -1.68
ATP2A1-202ENST00000395503 PRO2289Q9P1D8 64 aa4.54□□□□□ -1.68
ATP2A1-202ENST00000395503 KRTAP8-1Q8IUC2 63 aa4.54□□□□□ -1.68
ATP2A1-202ENST00000395503 KRTAP9-3Q9BYQ3 159 aa4.47□□□□□ -1.69
ATP2A1-202ENST00000395503 KRTAP19-5Q3LI72 72 aa4.37□□□□□ -1.71
ATP2A1-202ENST00000395503 FSIP2Q5CZC0 6907 aa4.36□□□□□ -1.71
ATP2A1-202ENST00000395503 LCE2BO14633 110 aa4.36□□□□□ -1.71
ATP2A1-202ENST00000395503 KRTAP4-8A0A0G2JLE6 195 aa4.35□□□□□ -1.71
ATP2A1-202ENST00000395503 KRTAP4-8Q9BYQ9 185 aa4.35□□□□□ -1.71
ATP2A1-202ENST00000395503 INE1O15225 51 aa4.28□□□□□ -1.73
ATP2A1-202ENST00000395503 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
ATP2A1-202ENST00000395503 KRTAP4-7Q9BYR0 210 aa4.23□□□□□ -1.73
ATP2A1-202ENST00000395503 KRTAP9-6A8MVA2 160 aa4.17□□□□□ -1.74
ATP2A1-202ENST00000395503 LCE2AQ5TA79 106 aaPredicted RBP4.1□□□□□ -1.75
ATP2A1-202ENST00000395503 KRTAP19-7Q3SYF9 63 aa4.09□□□□□ -1.76
ATP2A1-202ENST00000395503 SSPOA2VEC9 5147 aa4.08□□□□□ -1.76
ATP2A1-202ENST00000395503 DSTQ03001 7570 aaKnown RBP4.02□□□□□ -1.77
ATP2A1-202ENST00000395503 MUC12Q9UKN1 5478 aa4.01□□□□□ -1.77
ATP2A1-202ENST00000395503 FCGBPQ9Y6R7 5405 aaPredicted RBP3.98□□□□□ -1.77
ATP2A1-202ENST00000395503 MT1LQ93083 61 aa3.97□□□□□ -1.77
ATP2A1-202ENST00000395503 CRCT1Q9UGL9 99 aa3.96□□□□□ -1.77
ATP2A1-202ENST00000395503 MT1EP04732 61 aa3.95□□□□□ -1.78
ATP2A1-202ENST00000395503 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms