RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 Q6JHZ5 121 aa4.25□□□□□ -1.73
PFDN6-205ENST00000395134 USH2AO75445 5202 aa4.25□□□□□ -1.73
PFDN6-205ENST00000395134 GTF2H5Q6ZYL4 71 aa4.24□□□□□ -1.73
PFDN6-205ENST00000395134 Q96NJ1 140 aa4.24□□□□□ -1.73
PFDN6-205ENST00000395134 SERP1Q9Y6X1 66 aa4.24□□□□□ -1.73
PFDN6-205ENST00000395134 SNHG12Q9BXW3 62 aa4.23□□□□□ -1.73
PFDN6-205ENST00000395134 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.21□□□□□ -1.74
PFDN6-205ENST00000395134 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
PFDN6-205ENST00000395134 HSD52Q0P140 79 aa4.19□□□□□ -1.74
PFDN6-205ENST00000395134 SPATA45Q537H7 98 aa4.18□□□□□ -1.74
PFDN6-205ENST00000395134 PYY3Q5JQD4 70 aa4.18□□□□□ -1.74
PFDN6-205ENST00000395134 BVES-AS1Q5T3Y7 98 aa4.18□□□□□ -1.74
PFDN6-205ENST00000395134 VAMP8Q9BV40 100 aa4.18□□□□□ -1.74
PFDN6-205ENST00000395134 M0R143 59 aa4.17□□□□□ -1.74
PFDN6-205ENST00000395134 COX8AP10176 69 aa4.16□□□□□ -1.74
PFDN6-205ENST00000395134 PPDPFLQ8WWR9 84 aa4.16□□□□□ -1.74
PFDN6-205ENST00000395134 FCGBPQ9Y6R7 5405 aaPredicted RBP4.16□□□□□ -1.74
PFDN6-205ENST00000395134 MT2AP02795 61 aa4.14□□□□□ -1.75
PFDN6-205ENST00000395134 COX7CP15954 63 aa4.14□□□□□ -1.75
PFDN6-205ENST00000395134 ORMDL1Q9P0S3 153 aa4.14□□□□□ -1.75
PFDN6-205ENST00000395134 F8W1H4 67 aa4.13□□□□□ -1.75
PFDN6-205ENST00000395134 SNCGO76070 127 aa4.11□□□□□ -1.75
PFDN6-205ENST00000395134 MT1FP04733 61 aa4.11□□□□□ -1.75
PFDN6-205ENST00000395134 IGKV4-1P06312 121 aa4.11□□□□□ -1.75
PFDN6-205ENST00000395134 H0YGX0 51 aa4.1□□□□□ -1.75
PFDN6-205ENST00000395134 HIGD1BQ9P298 99 aa4.1□□□□□ -1.75
PFDN6-205ENST00000395134 LCE3EQ5T5B0 92 aa4.09□□□□□ -1.75
PFDN6-205ENST00000395134 KRTAP10-10P60014 251 aa4.08□□□□□ -1.76
PFDN6-205ENST00000395134 UQCR10Q9UDW1 63 aa4.08□□□□□ -1.76
PFDN6-205ENST00000395134 PRO1854Q9UHT4 67 aa4.07□□□□□ -1.76
PFDN6-205ENST00000395134 KRTAP5-3Q6L8H2 238 aa4.06□□□□□ -1.76
PFDN6-205ENST00000395134 COA5Q86WW8 74 aa4.06□□□□□ -1.76
PFDN6-205ENST00000395134 DNAL4O96015 105 aa4.05□□□□□ -1.76
PFDN6-205ENST00000395134 CCKP06307 115 aa4.05□□□□□ -1.76
PFDN6-205ENST00000395134 TRBV7-4A0A0J9YYF1 115 aa4.03□□□□□ -1.76
PFDN6-205ENST00000395134 DSCR8Q96T75 97 aa4.03□□□□□ -1.76
PFDN6-205ENST00000395134 LINC00472Q9H8W2 130 aa4.03□□□□□ -1.76
PFDN6-205ENST00000395134 MACF1Q9UPN3 7388 aaKnown RBP4.03□□□□□ -1.76
PFDN6-205ENST00000395134 CDC42SE1Q9NRR8 79 aa4.02□□□□□ -1.77
PFDN6-205ENST00000395134 SYNE2Q8WXH0 6885 aaKnown RBP4.02□□□□□ -1.77
PFDN6-205ENST00000395134 KRTAP12-2P59991 146 aa4.01□□□□□ -1.77
PFDN6-205ENST00000395134 COL5A1-AS1Q5SY13 56 aa4□□□□□ -1.77
PFDN6-205ENST00000395134 CSAG1Q6PB30 78 aa4□□□□□ -1.77
PFDN6-205ENST00000395134 ZCCHC13Q8WW36 166 aaKnown RBP3.99□□□□□ -1.77
PFDN6-205ENST00000395134 SPINK7P58062 85 aa3.98□□□□□ -1.77
PFDN6-205ENST00000395134 KRTAP10-5P60370 271 aa3.98□□□□□ -1.77
PFDN6-205ENST00000395134 WFDC13Q8IUB5 93 aa3.98□□□□□ -1.77
PFDN6-205ENST00000395134 PRO0461Q9UI25 63 aa3.98□□□□□ -1.77
PFDN6-205ENST00000395134 COX6CP09669 75 aa3.96□□□□□ -1.78
PFDN6-205ENST00000395134 RBM3P98179 157 aaKnown RBP3.95□□□□□ -1.78
PFDN6-205ENST00000395134 DMAC1Q96GE9 116 aa3.94□□□□□ -1.78
PFDN6-205ENST00000395134 JMJD7-PLA2G4BH0Y9G9 81 aa3.93□□□□□ -1.78
PFDN6-205ENST00000395134 KRTAP19-6Q3LI70 58 aa3.92□□□□□ -1.78
PFDN6-205ENST00000395134 NDUFB1O75438 58 aa3.91□□□□□ -1.78
PFDN6-205ENST00000395134 ATP5EP56381 51 aaPredicted RBP3.9□□□□□ -1.79
PFDN6-205ENST00000395134 LINC00846Q9NV44 126 aa3.9□□□□□ -1.79
PFDN6-205ENST00000395134 IGKV3D-7A0A0C4DH55 119 aa3.89□□□□□ -1.79
PFDN6-205ENST00000395134 INE1O15225 51 aa3.89□□□□□ -1.79
PFDN6-205ENST00000395134 PDE6GP18545 87 aa3.88□□□□□ -1.79
PFDN6-205ENST00000395134 SPTSSBQ8NFR3 76 aa3.87□□□□□ -1.79
PFDN6-205ENST00000395134 ATXN8Q156A1 80 aa3.86□□□□□ -1.79
PFDN6-205ENST00000395134 A0A1W2PPM0 123 aa3.85□□□□□ -1.79
PFDN6-205ENST00000395134 MMP24-AS1A0A0U1RRL7 71 aa3.84□□□□□ -1.79
PFDN6-205ENST00000395134 H1FX-AS1Q4G0G2 97 aa3.84□□□□□ -1.79
PFDN6-205ENST00000395134 LOC110117498A0A087WWA1 95 aa3.83□□□□□ -1.8
PFDN6-205ENST00000395134 MRPL34Q9BQ48 92 aaKnown RBP3.83□□□□□ -1.8
PFDN6-205ENST00000395134 K7EQZ3 153 aa3.82□□□□□ -1.8
PFDN6-205ENST00000395134 NREPQ16612 68 aa3.82□□□□□ -1.8
PFDN6-205ENST00000395134 SNURFQ9Y675 71 aa3.82□□□□□ -1.8
PFDN6-205ENST00000395134 SPCS1Q9Y6A9 102 aa3.82□□□□□ -1.8
PFDN6-205ENST00000395134 KRTAP6-3Q3LI67 103 aa3.81□□□□□ -1.8
PFDN6-205ENST00000395134 KRTAP13-4Q3LI77 160 aa3.81□□□□□ -1.8
PFDN6-205ENST00000395134 NEBP20929 6669 aa3.8□□□□□ -1.8
PFDN6-205ENST00000395134 HCG22E2RYF7 251 aa3.79□□□□□ -1.8
PFDN6-205ENST00000395134 MT-ATP8P03928 68 aa3.79□□□□□ -1.8
PFDN6-205ENST00000395134 K7EP34 96 aa3.78□□□□□ -1.8
PFDN6-205ENST00000395134 MUC12Q9UKN1 5478 aa3.78□□□□□ -1.8
PFDN6-205ENST00000395134 CYP4F30PQ9H0H9 118 aa3.75□□□□□ -1.81
PFDN6-205ENST00000395134 MT1BP07438 61 aa3.72□□□□□ -1.81
PFDN6-205ENST00000395134 KRTAP10-7P60409 375 aaPredicted RBP3.72□□□□□ -1.81
PFDN6-205ENST00000395134 LOC101927531A0A1B0GV80 90 aa3.71□□□□□ -1.82
PFDN6-205ENST00000395134 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
PFDN6-205ENST00000395134 S4R3F8 94 aa3.71□□□□□ -1.82
PFDN6-205ENST00000395134 Q5VV11 94 aa3.7□□□□□ -1.82
PFDN6-205ENST00000395134 CYSTM1Q9H1C7 97 aa3.68□□□□□ -1.82
PFDN6-205ENST00000395134 MDN1Q9NU22 5596 aa3.68□□□□□ -1.82
PFDN6-205ENST00000395134 ETDBQ3ZM63 59 aa3.67□□□□□ -1.82
PFDN6-205ENST00000395134 KMT2DO14686 5537 aa3.66□□□□□ -1.82
PFDN6-205ENST00000395134 C20orf197Q8N268 126 aa3.66□□□□□ -1.82
PFDN6-205ENST00000395134 KRTAP19-8Q3LI54 63 aa3.65□□□□□ -1.83
PFDN6-205ENST00000395134 KRTAP20-1Q3LI63 56 aa3.65□□□□□ -1.83
PFDN6-205ENST00000395134 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
PFDN6-205ENST00000395134 SPRR2GQ9BYE4 73 aa3.65□□□□□ -1.83
PFDN6-205ENST00000395134 PP632Q6XCG6 107 aa3.63□□□□□ -1.83
PFDN6-205ENST00000395134 KLKP1Q107X0 134 aa3.61□□□□□ -1.83
PFDN6-205ENST00000395134 UBL5Q9BZL1 73 aa3.61□□□□□ -1.83
PFDN6-205ENST00000395134 A0A087WVE0 104 aa3.6□□□□□ -1.83
PFDN6-205ENST00000395134 ATOX1O00244 68 aa3.58□□□□□ -1.84
PFDN6-205ENST00000395134 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
PFDN6-205ENST00000395134 KRTAP12-1P59990 96 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms