RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 KRTAP12-3P60328 96 aa6.16□□□□□ -1.42
PPARGC1B-203ENST00000394320 PLECQ15149 4684 aaKnown RBP6.14□□□□□ -1.43
PPARGC1B-203ENST00000394320 LORP23490 312 aaPredicted RBP6.09□□□□□ -1.44
PPARGC1B-203ENST00000394320 DNAH2Q9P225 4427 aa6.06□□□□□ -1.44
PPARGC1B-203ENST00000394320 VPS13DQ5THJ4 4388 aa6.05□□□□□ -1.44
PPARGC1B-203ENST00000394320 INE1O15225 51 aa6.05□□□□□ -1.44
PPARGC1B-203ENST00000394320 LCE3AQ5TA76 89 aa6.04□□□□□ -1.44
PPARGC1B-203ENST00000394320 VPS13CQ709C8 3753 aa6.03□□□□□ -1.44
PPARGC1B-203ENST00000394320 DNHD1Q96M86 4753 aa6.03□□□□□ -1.44
PPARGC1B-203ENST00000394320 DNAH17Q9UFH2 4485 aa6.03□□□□□ -1.44
PPARGC1B-203ENST00000394320 KRTAP4-1Q9BYQ7 146 aa6.01□□□□□ -1.45
PPARGC1B-203ENST00000394320 AKAP9Q99996 3911 aa6.01□□□□□ -1.45
PPARGC1B-203ENST00000394320 MT1HP80294 61 aa5.97□□□□□ -1.45
PPARGC1B-203ENST00000394320 DYNC1H1Q14204 4646 aaKnown RBP5.97□□□□□ -1.45
PPARGC1B-203ENST00000394320 SPRR2GQ9BYE4 73 aa5.92□□□□□ -1.46
PPARGC1B-203ENST00000394320 ZNF469Q96JG9 3925 aaPredicted RBP5.91□□□□□ -1.46
PPARGC1B-203ENST00000394320 KRTAP8-1Q8IUC2 63 aa5.9□□□□□ -1.46
PPARGC1B-203ENST00000394320 MT2AP02795 61 aa5.9□□□□□ -1.47
PPARGC1B-203ENST00000394320 CRCT1Q9UGL9 99 aa5.88□□□□□ -1.47
PPARGC1B-203ENST00000394320 LRP1BQ9NZR2 4599 aa5.86□□□□□ -1.47
PPARGC1B-203ENST00000394320 DYNC2H1Q8NCM8 4307 aaKnown RBP5.83□□□□□ -1.48
PPARGC1B-203ENST00000394320 RYR1P21817 5038 aa5.8□□□□□ -1.48
PPARGC1B-203ENST00000394320 SACSQ9NZJ4 4579 aa5.79□□□□□ -1.48
PPARGC1B-203ENST00000394320 FAT2Q9NYQ8 4349 aa5.79□□□□□ -1.48
PPARGC1B-203ENST00000394320 FAT1Q14517 4588 aa5.77□□□□□ -1.49
PPARGC1B-203ENST00000394320 STARD9Q9P2P6 4700 aa5.77□□□□□ -1.49
PPARGC1B-203ENST00000394320 MT1FP04733 61 aa5.74□□□□□ -1.49
PPARGC1B-203ENST00000394320 CSMD3Q7Z407 3707 aa5.72□□□□□ -1.49
PPARGC1B-203ENST00000394320 DNAH3Q8TD57 4116 aa5.71□□□□□ -1.5
PPARGC1B-203ENST00000394320 KRTAP19-4Q3LI73 84 aa5.68□□□□□ -1.5
PPARGC1B-203ENST00000394320 DNAH8Q96JB1 4490 aa5.62□□□□□ -1.51
PPARGC1B-203ENST00000394320 ANK2Q01484 3957 aa5.62□□□□□ -1.51
PPARGC1B-203ENST00000394320 PRKDCP78527 4128 aaKnown RBP5.61□□□□□ -1.51
PPARGC1B-203ENST00000394320 APOBP04114 4563 aaKnown RBP5.58□□□□□ -1.52
PPARGC1B-203ENST00000394320 RYR3Q15413 4870 aa5.57□□□□□ -1.52
PPARGC1B-203ENST00000394320 DNAH6Q9C0G6 4158 aa5.57□□□□□ -1.52
PPARGC1B-203ENST00000394320 KRTAP19-8Q3LI54 63 aa5.56□□□□□ -1.52
PPARGC1B-203ENST00000394320 RYR2Q92736 4967 aa5.56□□□□□ -1.52
PPARGC1B-203ENST00000394320 KIAA1109Q2LD37 5005 aa5.55□□□□□ -1.52
PPARGC1B-203ENST00000394320 KRTAP10-5P60370 271 aa5.51□□□□□ -1.53
PPARGC1B-203ENST00000394320 KRTAP17-1Q9BYP8 105 aa5.49□□□□□ -1.53
PPARGC1B-203ENST00000394320 KRTAP19-5Q3LI72 72 aa5.48□□□□□ -1.53
PPARGC1B-203ENST00000394320 KRTAP19-1Q8IUB9 90 aa5.47□□□□□ -1.53
PPARGC1B-203ENST00000394320 SPRR2FQ96RM1 72 aa5.46□□□□□ -1.54
PPARGC1B-203ENST00000394320 FAT3Q8TDW7 4589 aa5.46□□□□□ -1.54
PPARGC1B-203ENST00000394320 KRTAP10-7P60409 375 aaPredicted RBP5.44□□□□□ -1.54
PPARGC1B-203ENST00000394320 LCE3CQ5T5A8 94 aa5.41□□□□□ -1.54
PPARGC1B-203ENST00000394320 HERC1Q15751 4861 aa5.41□□□□□ -1.54
PPARGC1B-203ENST00000394320 VPS13BQ7Z7G8 4022 aa5.4□□□□□ -1.54
PPARGC1B-203ENST00000394320 LRP1Q07954 4544 aaKnown RBP5.4□□□□□ -1.55
PPARGC1B-203ENST00000394320 KMT2AQ03164 3969 aa5.38□□□□□ -1.55
PPARGC1B-203ENST00000394320 HSPG2P98160 4391 aa5.34□□□□□ -1.55
PPARGC1B-203ENST00000394320 DNAH7Q8WXX0 4024 aa5.34□□□□□ -1.56
PPARGC1B-203ENST00000394320 BIRC6Q9NR09 4857 aa5.33□□□□□ -1.56
PPARGC1B-203ENST00000394320 KRTAP9-8Q9BYQ0 159 aa5.31□□□□□ -1.56
PPARGC1B-203ENST00000394320 MYCBP2O75592 4640 aa5.29□□□□□ -1.56
PPARGC1B-203ENST00000394320 MT1BP07438 61 aa5.28□□□□□ -1.56
PPARGC1B-203ENST00000394320 MT1XP80297 61 aa5.28□□□□□ -1.56
PPARGC1B-203ENST00000394320 HERC2O95714 4834 aa5.27□□□□□ -1.57
PPARGC1B-203ENST00000394320 LCE2CQ5TA81 110 aa5.26□□□□□ -1.57
PPARGC1B-203ENST00000394320 LYSTQ99698 3801 aa5.23□□□□□ -1.57
PPARGC1B-203ENST00000394320 KRTAP9-3Q9BYQ3 159 aa5.2□□□□□ -1.58
PPARGC1B-203ENST00000394320 CMYA5Q8N3K9 4069 aa5.19□□□□□ -1.58
PPARGC1B-203ENST00000394320 PKD1P98161 4303 aa5.17□□□□□ -1.58
PPARGC1B-203ENST00000394320 SPRR2EP22531 72 aa5.13□□□□□ -1.59
PPARGC1B-203ENST00000394320 SPRR2BP35325 72 aa5.13□□□□□ -1.59
PPARGC1B-203ENST00000394320 SPRR2AP35326 72 aa5.13□□□□□ -1.59
PPARGC1B-203ENST00000394320 HECTD4Q9Y4D8 3996 aa5.13□□□□□ -1.59
PPARGC1B-203ENST00000394320 PCLOQ9Y6V0 5065 aa5.11□□□□□ -1.59
PPARGC1B-203ENST00000394320 FRAS1Q86XX4 4008 aa5.08□□□□□ -1.6
PPARGC1B-203ENST00000394320 MT1GP13640 62 aa5.08□□□□□ -1.6
PPARGC1B-203ENST00000394320 PKHD1L1Q86WI1 4243 aa5.07□□□□□ -1.6
PPARGC1B-203ENST00000394320 KRTAP19-2Q3LHN2 52 aa5.04□□□□□ -1.6
PPARGC1B-203ENST00000394320 LRP2P98164 4655 aa5.01□□□□□ -1.61
PPARGC1B-203ENST00000394320 LCE2BO14633 110 aa5□□□□□ -1.61
PPARGC1B-203ENST00000394320 SPRR2DP22532 72 aa4.99□□□□□ -1.61
PPARGC1B-203ENST00000394320 HYDINQ4G0P3 5121 aa4.98□□□□□ -1.61
PPARGC1B-203ENST00000394320 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
PPARGC1B-203ENST00000394320 KRTAP4-8A0A0G2JLE6 195 aa4.94□□□□□ -1.62
PPARGC1B-203ENST00000394320 KRTAP4-8Q9BYQ9 185 aa4.94□□□□□ -1.62
PPARGC1B-203ENST00000394320 KRTAP12-4P60329 112 aa4.92□□□□□ -1.62
PPARGC1B-203ENST00000394320 KRTAP19-3Q7Z4W3 81 aa4.86□□□□□ -1.63
PPARGC1B-203ENST00000394320 LCE3BQ5TA77 95 aa4.85□□□□□ -1.63
PPARGC1B-203ENST00000394320 MUC17Q685J3 4493 aa4.85□□□□□ -1.63
PPARGC1B-203ENST00000394320 PKHD1P08F94 4074 aa4.84□□□□□ -1.63
PPARGC1B-203ENST00000394320 KRTAP19-6Q3LI70 58 aa4.81□□□□□ -1.64
PPARGC1B-203ENST00000394320 MT1LQ93083 61 aa4.8□□□□□ -1.64
PPARGC1B-203ENST00000394320 EPPK1P58107 5090 aaKnown RBP4.8□□□□□ -1.64
PPARGC1B-203ENST00000394320 MT1EP04732 61 aa4.79□□□□□ -1.64
PPARGC1B-203ENST00000394320 ABCA13Q86UQ4 5058 aa4.77□□□□□ -1.65
PPARGC1B-203ENST00000394320 FLGP20930 4061 aaPredicted RBP4.77□□□□□ -1.65
PPARGC1B-203ENST00000394320 KMT2CQ8NEZ4 4911 aaKnown RBP4.75□□□□□ -1.65
PPARGC1B-203ENST00000394320 TNXBP22105 4242 aa4.72□□□□□ -1.65
PPARGC1B-203ENST00000394320 LCE2DQ5TA82 110 aaPredicted RBP4.7□□□□□ -1.66
PPARGC1B-203ENST00000394320 LCE2AQ5TA79 106 aaPredicted RBP4.7□□□□□ -1.66
PPARGC1B-203ENST00000394320 LPAP08519 4548 aa4.69□□□□□ -1.66
PPARGC1B-203ENST00000394320 LCE3DQ9BYE3 92 aa4.68□□□□□ -1.66
PPARGC1B-203ENST00000394320 KRTAP9-2Q9BYQ4 174 aa4.62□□□□□ -1.67
PPARGC1B-203ENST00000394320 LCE3EQ5T5B0 92 aa4.62□□□□□ -1.67
PPARGC1B-203ENST00000394320 MT1MQ8N339 61 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms