RNA–Protein interactions for RNA: ENST00000393958.6

PC-202, Transcript of pyruvate carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PC, Length 4,005 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PC-202ENST00000393958 COX6B2Q6YFQ2 88 aa5.43□□□□□ -1.54
PC-202ENST00000393958 RPL37P61927 97 aaKnown RBP5.41□□□□□ -1.54
PC-202ENST00000393958 APOBP04114 4563 aaKnown RBP5.41□□□□□ -1.54
PC-202ENST00000393958 EPPK1P58107 5090 aaKnown RBP5.4□□□□□ -1.54
PC-202ENST00000393958 KRTAP3-1Q9BYR8 98 aa5.4□□□□□ -1.54
PC-202ENST00000393958 KRTAP25-1Q3LHN0 102 aa5.39□□□□□ -1.55
PC-202ENST00000393958 A0A0A0MQY5 61 aa5.39□□□□□ -1.55
PC-202ENST00000393958 ROMO1P60602 79 aa5.38□□□□□ -1.55
PC-202ENST00000393958 RYR1P21817 5038 aa5.37□□□□□ -1.55
PC-202ENST00000393958 S4R3F8 94 aa5.36□□□□□ -1.55
PC-202ENST00000393958 M0R2T5 61 aa5.35□□□□□ -1.55
PC-202ENST00000393958 A8MUU9 505 aa5.35□□□□□ -1.55
PC-202ENST00000393958 HERC2O95714 4834 aa5.34□□□□□ -1.56
PC-202ENST00000393958 RYR2Q92736 4967 aa5.34□□□□□ -1.56
PC-202ENST00000393958 HSPG2P98160 4391 aa5.33□□□□□ -1.56
PC-202ENST00000393958 PKHD1L1Q86WI1 4243 aa5.33□□□□□ -1.56
PC-202ENST00000393958 FAT3Q8TDW7 4589 aa5.31□□□□□ -1.56
PC-202ENST00000393958 C20orf166-AS1Q96NR2 134 aa5.3□□□□□ -1.56
PC-202ENST00000393958 LPAP08519 4548 aa5.29□□□□□ -1.56
PC-202ENST00000393958 C10orf95Q9H7T3 257 aa5.26□□□□□ -1.57
PC-202ENST00000393958 KRTAP10-4P60372 401 aaPredicted RBP5.25□□□□□ -1.57
PC-202ENST00000393958 NDUFAF8A1L188 74 aa5.24□□□□□ -1.57
PC-202ENST00000393958 R4GN34 69 aa5.24□□□□□ -1.57
PC-202ENST00000393958 CAMK2N1Q7Z7J9 78 aa5.22□□□□□ -1.57
PC-202ENST00000393958 M0QZ58 72 aa5.21□□□□□ -1.58
PC-202ENST00000393958 RPS29P62273 56 aaKnown RBP5.21□□□□□ -1.58
PC-202ENST00000393958 KRTAP13-4Q3LI77 160 aa5.2□□□□□ -1.58
PC-202ENST00000393958 KRTAP10-8P60410 259 aa5.2□□□□□ -1.58
PC-202ENST00000393958 TNXBP22105 4242 aa5.19□□□□□ -1.58
PC-202ENST00000393958 P0C880 135 aa5.18□□□□□ -1.58
PC-202ENST00000393958 SEC61BP60468 96 aaKnown RBP5.18□□□□□ -1.58
PC-202ENST00000393958 LUZP6Q538Z0 58 aa5.18□□□□□ -1.58
PC-202ENST00000393958 PCLOQ9Y6V0 5065 aa5.17□□□□□ -1.58
PC-202ENST00000393958 LRP2P98164 4655 aa5.16□□□□□ -1.58
PC-202ENST00000393958 KRTAP10-6P60371 365 aaPredicted RBP5.13□□□□□ -1.59
PC-202ENST00000393958 KRTAP3-3Q9BYR6 98 aa5.11□□□□□ -1.59
PC-202ENST00000393958 ABCA13Q86UQ4 5058 aa5.1□□□□□ -1.59
PC-202ENST00000393958 TPRXLQ17RH7 258 aa5.1□□□□□ -1.59
PC-202ENST00000393958 XP32Q5T750 250 aa5.09□□□□□ -1.59
PC-202ENST00000393958 KRTAP12-2P59991 146 aa5.06□□□□□ -1.6
PC-202ENST00000393958 KRTAP3-2Q9BYR7 98 aa5.06□□□□□ -1.6
PC-202ENST00000393958 MT1HL1P0DM35 61 aa5.05□□□□□ -1.6
PC-202ENST00000393958 HERC1Q15751 4861 aa5.01□□□□□ -1.61
PC-202ENST00000393958 MUC2Q02817 5179 aa5.01□□□□□ -1.61
PC-202ENST00000393958 KRTAP12-1P59990 96 aa4.94□□□□□ -1.62
PC-202ENST00000393958 UBR4Q5T4S7 5183 aa4.89□□□□□ -1.63
PC-202ENST00000393958 PLAC4Q8WY50 150 aa4.87□□□□□ -1.63
PC-202ENST00000393958 FSIP2Q5CZC0 6907 aa4.86□□□□□ -1.63
PC-202ENST00000393958 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
PC-202ENST00000393958 LORP23490 312 aaPredicted RBP4.79□□□□□ -1.64
PC-202ENST00000393958 RNF213Q63HN8 5207 aa4.78□□□□□ -1.64
PC-202ENST00000393958 TNP1P09430 55 aa4.73□□□□□ -1.65
PC-202ENST00000393958 MUC17Q685J3 4493 aa4.71□□□□□ -1.66
PC-202ENST00000393958 KRTAP9-2Q9BYQ4 174 aa4.7□□□□□ -1.66
PC-202ENST00000393958 FAT4Q6V0I7 4981 aa4.7□□□□□ -1.66
PC-202ENST00000393958 KRTAP4-1Q9BYQ7 146 aa4.7□□□□□ -1.66
PC-202ENST00000393958 KRTAP10-10P60014 251 aa4.64□□□□□ -1.67
PC-202ENST00000393958 PP632Q6XCG6 107 aa4.64□□□□□ -1.67
PC-202ENST00000393958 KRTAP9-6A0A140TA67 174 aa4.62□□□□□ -1.67
PC-202ENST00000393958 HMCN2Q8NDA2 5059 aa4.53□□□□□ -1.68
PC-202ENST00000393958 CRCT1Q9UGL9 99 aa4.52□□□□□ -1.69
PC-202ENST00000393958 KRTAP19-2Q3LHN2 52 aa4.48□□□□□ -1.69
PC-202ENST00000393958 FLGP20930 4061 aaPredicted RBP4.41□□□□□ -1.7
PC-202ENST00000393958 MT1HP80294 61 aa4.36□□□□□ -1.71
PC-202ENST00000393958 LCE2AQ5TA79 106 aaPredicted RBP4.3□□□□□ -1.72
PC-202ENST00000393958 LCE2CQ5TA81 110 aa4.24□□□□□ -1.73
PC-202ENST00000393958 PRO2289Q9P1D8 64 aa4.23□□□□□ -1.73
PC-202ENST00000393958 KRTAP9-7A8MTY7 169 aa4.21□□□□□ -1.73
PC-202ENST00000393958 LCE3AQ5TA76 89 aa4.2□□□□□ -1.74
PC-202ENST00000393958 USH2AO75445 5202 aa4.18□□□□□ -1.74
PC-202ENST00000393958 LCE2DQ5TA82 110 aaPredicted RBP4.17□□□□□ -1.74
PC-202ENST00000393958 KRTAP19-1Q8IUB9 90 aa4.16□□□□□ -1.74
PC-202ENST00000393958 MT1FP04733 61 aa4.1□□□□□ -1.75
PC-202ENST00000393958 KMT2DO14686 5537 aa4.09□□□□□ -1.75
PC-202ENST00000393958 MT2AP02795 61 aa4.09□□□□□ -1.76
PC-202ENST00000393958 SPRR2GQ9BYE4 73 aa4.07□□□□□ -1.76
PC-202ENST00000393958 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.05□□□□□ -1.76
PC-202ENST00000393958 KRTAP10-12P60413 245 aa4.04□□□□□ -1.76
PC-202ENST00000393958 INE1O15225 51 aa4.04□□□□□ -1.76
PC-202ENST00000393958 KRTAP12-3P60328 96 aa4.03□□□□□ -1.76
PC-202ENST00000393958 KRTAP9-8Q9BYQ0 159 aa4.03□□□□□ -1.76
PC-202ENST00000393958 SPRR5A0A1B0GTR4 108 aa4.02□□□□□ -1.77
PC-202ENST00000393958 KRTAP23-1A1A580 65 aa4.01□□□□□ -1.77
PC-202ENST00000393958 SYNE2Q8WXH0 6885 aaKnown RBP4.01□□□□□ -1.77
PC-202ENST00000393958 KRTAP10-7P60409 375 aaPredicted RBP3.93□□□□□ -1.78
PC-202ENST00000393958 MT1BP07438 61 aa3.92□□□□□ -1.78
PC-202ENST00000393958 KRTAP10-5P60370 271 aa3.92□□□□□ -1.78
PC-202ENST00000393958 MT1XP80297 61 aa3.91□□□□□ -1.78
PC-202ENST00000393958 KRTAP8-1Q8IUC2 63 aa3.89□□□□□ -1.79
PC-202ENST00000393958 LCE2BO14633 110 aa3.89□□□□□ -1.79
PC-202ENST00000393958 SPRR2FQ96RM1 72 aa3.87□□□□□ -1.79
PC-202ENST00000393958 KRTAP19-8Q3LI54 63 aa3.84□□□□□ -1.79
PC-202ENST00000393958 MACF1Q9UPN3 7388 aaKnown RBP3.83□□□□□ -1.8
PC-202ENST00000393958 KRTAP9-3Q9BYQ3 159 aa3.83□□□□□ -1.8
PC-202ENST00000393958 KRTAP19-5Q3LI72 72 aa3.78□□□□□ -1.8
PC-202ENST00000393958 SPRR2EP22531 72 aa3.78□□□□□ -1.8
PC-202ENST00000393958 SPRR2BP35325 72 aa3.78□□□□□ -1.8
PC-202ENST00000393958 SPRR2AP35326 72 aa3.78□□□□□ -1.8
PC-202ENST00000393958 KRTAP4-8A0A0G2JLE6 195 aa3.77□□□□□ -1.81
PC-202ENST00000393958 KRTAP20-1Q3LI63 56 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms