RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 TP53AIP1Q9HCN2 124 aa6.42□□□□□ -1.38
CHMP3-202ENST00000393773 H0YAA0 97 aa6.41□□□□□ -1.38
CHMP3-202ENST00000393773 SPRR2DP22532 72 aa6.41□□□□□ -1.38
CHMP3-202ENST00000393773 A0A1W2PPM0 123 aa6.4□□□□□ -1.38
CHMP3-202ENST00000393773 KRTAP12-2P59991 146 aa6.4□□□□□ -1.38
CHMP3-202ENST00000393773 C9orf118A6NHY6 69 aa6.39□□□□□ -1.39
CHMP3-202ENST00000393773 BATFQ16520 125 aa6.39□□□□□ -1.39
CHMP3-202ENST00000393773 UBL5Q9BZL1 73 aa6.39□□□□□ -1.39
CHMP3-202ENST00000393773 CYP4F30PQ9H0H9 118 aa6.39□□□□□ -1.39
CHMP3-202ENST00000393773 A8MUN3 132 aa6.37□□□□□ -1.39
CHMP3-202ENST00000393773 TAX1BP3O14907 124 aa6.36□□□□□ -1.39
CHMP3-202ENST00000393773 KRTAP4-8A0A0G2JLE6 195 aa6.31□□□□□ -1.4
CHMP3-202ENST00000393773 ADM2Q7Z4H4 148 aa6.31□□□□□ -1.4
CHMP3-202ENST00000393773 KRTAP4-8Q9BYQ9 185 aa6.31□□□□□ -1.4
CHMP3-202ENST00000393773 K7EP34 96 aa6.3□□□□□ -1.4
CHMP3-202ENST00000393773 NDUFC1O43677 76 aa6.3□□□□□ -1.4
CHMP3-202ENST00000393773 SMIM6P0DI80 62 aa6.29□□□□□ -1.4
CHMP3-202ENST00000393773 TRAV22A0A0B4J277 110 aa6.28□□□□□ -1.4
CHMP3-202ENST00000393773 LOC101927531A0A1B0GV80 90 aa6.28□□□□□ -1.4
CHMP3-202ENST00000393773 PLAC4Q8WY50 150 aa6.28□□□□□ -1.4
CHMP3-202ENST00000393773 LCE3BQ5TA77 95 aa6.27□□□□□ -1.41
CHMP3-202ENST00000393773 SPCS1Q9Y6A9 102 aa6.27□□□□□ -1.41
CHMP3-202ENST00000393773 GPR98Q8WXG9 6306 aa6.27□□□□□ -1.41
CHMP3-202ENST00000393773 PRO0461Q9UI25 63 aa6.24□□□□□ -1.41
CHMP3-202ENST00000393773 KRTAP10-7P60409 375 aaPredicted RBP6.17□□□□□ -1.42
CHMP3-202ENST00000393773 R4GN34 69 aa6.17□□□□□ -1.42
CHMP3-202ENST00000393773 KRTAP10-12P60413 245 aa6.15□□□□□ -1.42
CHMP3-202ENST00000393773 ACYP1P07311 99 aa6.14□□□□□ -1.43
CHMP3-202ENST00000393773 P0C880 135 aa6.14□□□□□ -1.43
CHMP3-202ENST00000393773 H0Y9P7 68 aa6.11□□□□□ -1.43
CHMP3-202ENST00000393773 M0QZ58 72 aa6.11□□□□□ -1.43
CHMP3-202ENST00000393773 ATOX1O00244 68 aa6.09□□□□□ -1.43
CHMP3-202ENST00000393773 LOC105371267A0A1B0GV96 52 aa6.08□□□□□ -1.44
CHMP3-202ENST00000393773 UQCRQO14949 82 aa6.07□□□□□ -1.44
CHMP3-202ENST00000393773 DSTQ03001 7570 aaKnown RBP6.07□□□□□ -1.44
CHMP3-202ENST00000393773 C20orf197Q8N268 126 aa6.06□□□□□ -1.44
CHMP3-202ENST00000393773 LINC01554Q52M75 96 aa6.03□□□□□ -1.44
CHMP3-202ENST00000393773 KRTAP3-2Q9BYR7 98 aa6.02□□□□□ -1.45
CHMP3-202ENST00000393773 ETDBQ3ZM63 59 aa5.99□□□□□ -1.45
CHMP3-202ENST00000393773 COL5A1-AS1Q5SY13 56 aa5.98□□□□□ -1.45
CHMP3-202ENST00000393773 ATP5EP2Q5VTU8 51 aa5.95□□□□□ -1.46
CHMP3-202ENST00000393773 LINC00208Q96KT6 92 aa5.95□□□□□ -1.46
CHMP3-202ENST00000393773 HIST1H4AP62805 103 aaKnown RBP5.94□□□□□ -1.46
CHMP3-202ENST00000393773 F8W1H4 67 aa5.93□□□□□ -1.46
CHMP3-202ENST00000393773 KRTAP4-9Q9BYQ8 210 aa5.93□□□□□ -1.46
CHMP3-202ENST00000393773 GTF2H5Q6ZYL4 71 aa5.91□□□□□ -1.46
CHMP3-202ENST00000393773 LCE5AQ5TCM9 118 aa5.87□□□□□ -1.47
CHMP3-202ENST00000393773 DMAC1Q96GE9 116 aa5.87□□□□□ -1.47
CHMP3-202ENST00000393773 FAM240AA0A1B0GVK7 77 aa5.84□□□□□ -1.47
CHMP3-202ENST00000393773 MP68P56378 58 aa5.84□□□□□ -1.47
CHMP3-202ENST00000393773 OCR1Q9BZK8 76 aa5.84□□□□□ -1.47
CHMP3-202ENST00000393773 MT-ATP8P03928 68 aa5.81□□□□□ -1.48
CHMP3-202ENST00000393773 KRTAP19-7Q3SYF9 63 aa5.81□□□□□ -1.48
CHMP3-202ENST00000393773 HMCN1Q96RW7 5635 aa5.8□□□□□ -1.48
CHMP3-202ENST00000393773 PCP4L1A6NKN8 68 aa5.79□□□□□ -1.48
CHMP3-202ENST00000393773 KRTAP19-3Q7Z4W3 81 aa5.79□□□□□ -1.48
CHMP3-202ENST00000393773 LCE1DQ5T752 114 aa5.78□□□□□ -1.48
CHMP3-202ENST00000393773 MT1EP04732 61 aa5.77□□□□□ -1.49
CHMP3-202ENST00000393773 AHNAK2Q8IVF2 5795 aa5.75□□□□□ -1.49
CHMP3-202ENST00000393773 H3BPC8 53 aa5.72□□□□□ -1.49
CHMP3-202ENST00000393773 TRAV7A0A075B6U4 112 aa5.7□□□□□ -1.5
CHMP3-202ENST00000393773 LINC00643Q86TS7 51 aa5.7□□□□□ -1.5
CHMP3-202ENST00000393773 CYSTM1Q9H1C7 97 aa5.67□□□□□ -1.5
CHMP3-202ENST00000393773 MT4P47944 62 aa5.63□□□□□ -1.51
CHMP3-202ENST00000393773 LCE4AQ5TA78 99 aa5.63□□□□□ -1.51
CHMP3-202ENST00000393773 KRTAP13-4Q3LI77 160 aa5.6□□□□□ -1.51
CHMP3-202ENST00000393773 KRTAP5-10Q6L8G5 202 aa5.59□□□□□ -1.51
CHMP3-202ENST00000393773 CAMK2N1Q7Z7J9 78 aa5.59□□□□□ -1.51
CHMP3-202ENST00000393773 SPTSSBQ8NFR3 76 aa5.59□□□□□ -1.51
CHMP3-202ENST00000393773 ACYP2P14621 99 aa5.58□□□□□ -1.52
CHMP3-202ENST00000393773 MT1GP13640 62 aa5.57□□□□□ -1.52
CHMP3-202ENST00000393773 KRTAP19-5Q3LI72 72 aa5.53□□□□□ -1.52
CHMP3-202ENST00000393773 PP632Q6XCG6 107 aa5.52□□□□□ -1.53
CHMP3-202ENST00000393773 MT1MQ8N339 61 aa5.52□□□□□ -1.53
CHMP3-202ENST00000393773 KRTAP5-4Q6L8H1 288 aa5.51□□□□□ -1.53
CHMP3-202ENST00000393773 A0A1B0GV90 55 aa5.48□□□□□ -1.53
CHMP3-202ENST00000393773 A0A0D9SG42 100 aa5.47□□□□□ -1.53
CHMP3-202ENST00000393773 CHKB-CPT1BH3BT56 60 aa5.47□□□□□ -1.53
CHMP3-202ENST00000393773 J3QR89 54 aa5.47□□□□□ -1.53
CHMP3-202ENST00000393773 SCGB1A1P11684 91 aa5.46□□□□□ -1.54
CHMP3-202ENST00000393773 MT1LQ93083 61 aa5.45□□□□□ -1.54
CHMP3-202ENST00000393773 KRTAP4-6Q9BYQ5 205 aa5.45□□□□□ -1.54
CHMP3-202ENST00000393773 KRTAP5-7Q6L8G8 165 aa5.41□□□□□ -1.54
CHMP3-202ENST00000393773 KRTAP4-3Q9BYR4 195 aa5.41□□□□□ -1.54
CHMP3-202ENST00000393773 KRTAP5-3Q6L8H2 238 aa5.34□□□□□ -1.55
CHMP3-202ENST00000393773 SPINT4Q6UDR6 99 aa5.25□□□□□ -1.57
CHMP3-202ENST00000393773 SMIM20Q8N5G0 67 aa5.25□□□□□ -1.57
CHMP3-202ENST00000393773 KRTAP12-1P59990 96 aa5.24□□□□□ -1.57
CHMP3-202ENST00000393773 SPATA8Q6RVD6 105 aa5.24□□□□□ -1.57
CHMP3-202ENST00000393773 C10orf95Q9H7T3 257 aa5.24□□□□□ -1.57
CHMP3-202ENST00000393773 SNURFQ9Y675 71 aa5.24□□□□□ -1.57
CHMP3-202ENST00000393773 SPANXA2-OT1Q8N9U9 137 aa5.23□□□□□ -1.57
CHMP3-202ENST00000393773 K7ERU9 68 aa5.21□□□□□ -1.58
CHMP3-202ENST00000393773 KRTAP20-2Q3LI61 65 aa5.21□□□□□ -1.58
CHMP3-202ENST00000393773 LCE3AQ5TA76 89 aa5.21□□□□□ -1.58
CHMP3-202ENST00000393773 KRTAP4-7Q9BYR0 210 aa5.16□□□□□ -1.58
CHMP3-202ENST00000393773 KRTAP5-5Q701N2 237 aaPredicted RBP5.13□□□□□ -1.59
CHMP3-202ENST00000393773 SPRR5A0A1B0GTR4 108 aa5.12□□□□□ -1.59
CHMP3-202ENST00000393773 COA5Q86WW8 74 aa5.12□□□□□ -1.59
CHMP3-202ENST00000393773 SERP1Q9Y6X1 66 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms