RNA–Protein interactions for RNA: ENST00000393304.5

RAB43-202, Transcript of RAB43, member RAS oncogene family, humanhuman

APPRIS P1 TSL 4 BASIC

Gene RAB43, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43-202ENST00000393304 DNAH17Q9UFH2 4485 aa7.09□□□□□ -1.27
RAB43-202ENST00000393304 VPS13DQ5THJ4 4388 aa7.05□□□□□ -1.28
RAB43-202ENST00000393304 KMT2AQ03164 3969 aa7.05□□□□□ -1.28
RAB43-202ENST00000393304 KRTAP3-3Q9BYR6 98 aa7.01□□□□□ -1.29
RAB43-202ENST00000393304 KRTAP3-2Q9BYR7 98 aa7□□□□□ -1.29
RAB43-202ENST00000393304 PLECQ15149 4684 aaKnown RBP6.99□□□□□ -1.29
RAB43-202ENST00000393304 DYNC2H1Q8NCM8 4307 aaKnown RBP6.93□□□□□ -1.3
RAB43-202ENST00000393304 KRTAP10-4P60372 401 aaPredicted RBP6.93□□□□□ -1.3
RAB43-202ENST00000393304 DNAH2Q9P225 4427 aa6.92□□□□□ -1.3
RAB43-202ENST00000393304 DNAH11Q96DT5 4516 aa6.89□□□□□ -1.31
RAB43-202ENST00000393304 DNAH6Q9C0G6 4158 aa6.87□□□□□ -1.31
RAB43-202ENST00000393304 DNHD1Q96M86 4753 aa6.8□□□□□ -1.32
RAB43-202ENST00000393304 STARD9Q9P2P6 4700 aa6.8□□□□□ -1.32
RAB43-202ENST00000393304 MT1HL1P0DM35 61 aa6.79□□□□□ -1.32
RAB43-202ENST00000393304 KRTAP15-1Q3LI76 137 aa6.79□□□□□ -1.32
RAB43-202ENST00000393304 DNAH5Q8TE73 4624 aa6.76□□□□□ -1.33
RAB43-202ENST00000393304 PRKDCP78527 4128 aaKnown RBP6.76□□□□□ -1.33
RAB43-202ENST00000393304 FAT2Q9NYQ8 4349 aa6.7□□□□□ -1.34
RAB43-202ENST00000393304 KRTAP10-10P60014 251 aa6.69□□□□□ -1.34
RAB43-202ENST00000393304 LRP1BQ9NZR2 4599 aa6.68□□□□□ -1.34
RAB43-202ENST00000393304 FAT1Q14517 4588 aa6.6□□□□□ -1.35
RAB43-202ENST00000393304 VPS13BQ7Z7G8 4022 aa6.6□□□□□ -1.35
RAB43-202ENST00000393304 PKD1P98161 4303 aa6.53□□□□□ -1.36
RAB43-202ENST00000393304 DYNC1H1Q14204 4646 aaKnown RBP6.48□□□□□ -1.37
RAB43-202ENST00000393304 PKHD1P08F94 4074 aa6.48□□□□□ -1.37
RAB43-202ENST00000393304 LORP23490 312 aaPredicted RBP6.48□□□□□ -1.37
RAB43-202ENST00000393304 KRTAP4-5Q9BYR2 181 aa6.44□□□□□ -1.38
RAB43-202ENST00000393304 HYDINQ4G0P3 5121 aa6.41□□□□□ -1.38
RAB43-202ENST00000393304 PRO2289Q9P1D8 64 aa6.4□□□□□ -1.38
RAB43-202ENST00000393304 MYCBP2O75592 4640 aa6.37□□□□□ -1.39
RAB43-202ENST00000393304 SACSQ9NZJ4 4579 aa6.35□□□□□ -1.39
RAB43-202ENST00000393304 PKHD1L1Q86WI1 4243 aa6.27□□□□□ -1.41
RAB43-202ENST00000393304 HSPG2P98160 4391 aa6.22□□□□□ -1.41
RAB43-202ENST00000393304 KRTAP23-1A1A580 65 aa6.21□□□□□ -1.41
RAB43-202ENST00000393304 APOBP04114 4563 aaKnown RBP6.21□□□□□ -1.42
RAB43-202ENST00000393304 RYR1P21817 5038 aa6.21□□□□□ -1.42
RAB43-202ENST00000393304 KRTAP4-1Q9BYQ7 146 aa6.2□□□□□ -1.42
RAB43-202ENST00000393304 LRP1Q07954 4544 aaKnown RBP6.17□□□□□ -1.42
RAB43-202ENST00000393304 KIAA1109Q2LD37 5005 aa6.14□□□□□ -1.43
RAB43-202ENST00000393304 LPAP08519 4548 aa6.1□□□□□ -1.43
RAB43-202ENST00000393304 LCE3AQ5TA76 89 aa6.09□□□□□ -1.43
RAB43-202ENST00000393304 FAT3Q8TDW7 4589 aa6.09□□□□□ -1.43
RAB43-202ENST00000393304 KRTAP10-12P60413 245 aa6.06□□□□□ -1.44
RAB43-202ENST00000393304 TNXBP22105 4242 aa6.05□□□□□ -1.44
RAB43-202ENST00000393304 INE1O15225 51 aa6.03□□□□□ -1.44
RAB43-202ENST00000393304 KRTAP12-3P60328 96 aa6.02□□□□□ -1.45
RAB43-202ENST00000393304 RYR3Q15413 4870 aa6□□□□□ -1.45
RAB43-202ENST00000393304 KRTAP17-1Q9BYP8 105 aa5.99□□□□□ -1.45
RAB43-202ENST00000393304 KMT2CQ8NEZ4 4911 aaKnown RBP5.96□□□□□ -1.46
RAB43-202ENST00000393304 LRP2P98164 4655 aa5.95□□□□□ -1.46
RAB43-202ENST00000393304 RYR2Q92736 4967 aa5.86□□□□□ -1.47
RAB43-202ENST00000393304 SPRR2GQ9BYE4 73 aa5.86□□□□□ -1.47
RAB43-202ENST00000393304 MT2AP02795 61 aa5.75□□□□□ -1.49
RAB43-202ENST00000393304 MT1HP80294 61 aa5.75□□□□□ -1.49
RAB43-202ENST00000393304 BIRC6Q9NR09 4857 aa5.71□□□□□ -1.5
RAB43-202ENST00000393304 MT1FP04733 61 aa5.69□□□□□ -1.5
RAB43-202ENST00000393304 KRTAP8-1Q8IUC2 63 aa5.67□□□□□ -1.5
RAB43-202ENST00000393304 HERC2O95714 4834 aa5.67□□□□□ -1.5
RAB43-202ENST00000393304 KRTAP19-1Q8IUB9 90 aa5.67□□□□□ -1.5
RAB43-202ENST00000393304 EPPK1P58107 5090 aaKnown RBP5.62□□□□□ -1.51
RAB43-202ENST00000393304 SPRR5A0A1B0GTR4 108 aa5.55□□□□□ -1.52
RAB43-202ENST00000393304 ABCA13Q86UQ4 5058 aa5.53□□□□□ -1.52
RAB43-202ENST00000393304 CRCT1Q9UGL9 99 aa5.52□□□□□ -1.53
RAB43-202ENST00000393304 KRTAP19-8Q3LI54 63 aa5.48□□□□□ -1.53
RAB43-202ENST00000393304 KRTAP19-2Q3LHN2 52 aa5.47□□□□□ -1.53
RAB43-202ENST00000393304 MUC17Q685J3 4493 aa5.46□□□□□ -1.53
RAB43-202ENST00000393304 KRTAP19-5Q3LI72 72 aa5.45□□□□□ -1.54
RAB43-202ENST00000393304 LCE2CQ5TA81 110 aa5.42□□□□□ -1.54
RAB43-202ENST00000393304 KRTAP10-7P60409 375 aaPredicted RBP5.41□□□□□ -1.54
RAB43-202ENST00000393304 LCE3CQ5T5A8 94 aa5.41□□□□□ -1.54
RAB43-202ENST00000393304 MT1XP80297 61 aa5.4□□□□□ -1.55
RAB43-202ENST00000393304 KRTAP10-5P60370 271 aa5.37□□□□□ -1.55
RAB43-202ENST00000393304 MT1BP07438 61 aa5.37□□□□□ -1.55
RAB43-202ENST00000393304 KRTAP9-8Q9BYQ0 159 aa5.37□□□□□ -1.55
RAB43-202ENST00000393304 MUC2Q02817 5179 aa5.34□□□□□ -1.55
RAB43-202ENST00000393304 PCLOQ9Y6V0 5065 aa5.29□□□□□ -1.56
RAB43-202ENST00000393304 FLGP20930 4061 aaPredicted RBP5.28□□□□□ -1.56
RAB43-202ENST00000393304 HERC1Q15751 4861 aa5.26□□□□□ -1.57
RAB43-202ENST00000393304 RNF213Q63HN8 5207 aa5.2□□□□□ -1.58
RAB43-202ENST00000393304 KRTAP9-3Q9BYQ3 159 aa5.17□□□□□ -1.58
RAB43-202ENST00000393304 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
RAB43-202ENST00000393304 KRTAP4-8A0A0G2JLE6 195 aa5.12□□□□□ -1.59
RAB43-202ENST00000393304 KRTAP4-8Q9BYQ9 185 aa5.12□□□□□ -1.59
RAB43-202ENST00000393304 UBR4Q5T4S7 5183 aa5.09□□□□□ -1.59
RAB43-202ENST00000393304 FAT4Q6V0I7 4981 aa5.08□□□□□ -1.6
RAB43-202ENST00000393304 FSIP2Q5CZC0 6907 aa5.01□□□□□ -1.61
RAB43-202ENST00000393304 HMCN2Q8NDA2 5059 aa4.99□□□□□ -1.61
RAB43-202ENST00000393304 LCE2BO14633 110 aa4.95□□□□□ -1.62
RAB43-202ENST00000393304 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
RAB43-202ENST00000393304 SPRR2FQ96RM1 72 aa4.91□□□□□ -1.62
RAB43-202ENST00000393304 MT1GP13640 62 aa4.86□□□□□ -1.63
RAB43-202ENST00000393304 KRTAP12-4P60329 112 aa4.86□□□□□ -1.63
RAB43-202ENST00000393304 MT1LQ93083 61 aa4.81□□□□□ -1.64
RAB43-202ENST00000393304 MT1EP04732 61 aa4.76□□□□□ -1.65
RAB43-202ENST00000393304 LCE3BQ5TA77 95 aa4.76□□□□□ -1.65
RAB43-202ENST00000393304 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
RAB43-202ENST00000393304 KRTAP9-2Q9BYQ4 174 aa4.7□□□□□ -1.66
RAB43-202ENST00000393304 KRTAP19-7Q3SYF9 63 aa4.68□□□□□ -1.66
RAB43-202ENST00000393304 KRTAP19-3Q7Z4W3 81 aa4.64□□□□□ -1.67
RAB43-202ENST00000393304 LCE2AQ5TA79 106 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms