RNA–Protein interactions for RNA: ENST00000381337.6

THUMPD1-201, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 4,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-201ENST00000381337 STARD9Q9P2P6 4700 aa5.22□□□□□ -1.57
THUMPD1-201ENST00000381337 LYSTQ99698 3801 aa5.21□□□□□ -1.58
THUMPD1-201ENST00000381337 MT1HL1P0DM35 61 aa5.17□□□□□ -1.58
THUMPD1-201ENST00000381337 DNAH11Q96DT5 4516 aa5.17□□□□□ -1.58
THUMPD1-201ENST00000381337 KMT2AQ03164 3969 aa5.16□□□□□ -1.58
THUMPD1-201ENST00000381337 CMYA5Q8N3K9 4069 aa5.14□□□□□ -1.59
THUMPD1-201ENST00000381337 PRO2289Q9P1D8 64 aa5.13□□□□□ -1.59
THUMPD1-201ENST00000381337 FAT1Q14517 4588 aa5.1□□□□□ -1.59
THUMPD1-201ENST00000381337 INE1O15225 51 aa5.09□□□□□ -1.59
THUMPD1-201ENST00000381337 DNAH1Q9P2D7 4330 aa5.08□□□□□ -1.6
THUMPD1-201ENST00000381337 LORP23490 312 aaPredicted RBP5.08□□□□□ -1.6
THUMPD1-201ENST00000381337 DNAH5Q8TE73 4624 aa5.08□□□□□ -1.6
THUMPD1-201ENST00000381337 ALMS1Q8TCU4 4167 aa5.05□□□□□ -1.6
THUMPD1-201ENST00000381337 DNAH7Q8WXX0 4024 aa5.04□□□□□ -1.6
THUMPD1-201ENST00000381337 KIAA1109Q2LD37 5005 aa5.04□□□□□ -1.6
THUMPD1-201ENST00000381337 KRTAP23-1A1A580 65 aa5.01□□□□□ -1.61
THUMPD1-201ENST00000381337 KRTAP4-5Q9BYR2 181 aa5.01□□□□□ -1.61
THUMPD1-201ENST00000381337 DNAH3Q8TD57 4116 aa5□□□□□ -1.61
THUMPD1-201ENST00000381337 DNAH8Q96JB1 4490 aa4.99□□□□□ -1.61
THUMPD1-201ENST00000381337 DNAH17Q9UFH2 4485 aa4.99□□□□□ -1.61
THUMPD1-201ENST00000381337 KMT2CQ8NEZ4 4911 aaKnown RBP4.97□□□□□ -1.61
THUMPD1-201ENST00000381337 HYDINQ4G0P3 5121 aa4.97□□□□□ -1.61
THUMPD1-201ENST00000381337 VPS13DQ5THJ4 4388 aa4.96□□□□□ -1.61
THUMPD1-201ENST00000381337 LRP1BQ9NZR2 4599 aa4.96□□□□□ -1.62
THUMPD1-201ENST00000381337 RYR1P21817 5038 aa4.94□□□□□ -1.62
THUMPD1-201ENST00000381337 DNAH2Q9P225 4427 aa4.94□□□□□ -1.62
THUMPD1-201ENST00000381337 DYNC1H1Q14204 4646 aaKnown RBP4.94□□□□□ -1.62
THUMPD1-201ENST00000381337 RYR3Q15413 4870 aa4.92□□□□□ -1.62
THUMPD1-201ENST00000381337 MYCBP2O75592 4640 aa4.91□□□□□ -1.62
THUMPD1-201ENST00000381337 DNAH6Q9C0G6 4158 aa4.9□□□□□ -1.63
THUMPD1-201ENST00000381337 FAT3Q8TDW7 4589 aa4.88□□□□□ -1.63
THUMPD1-201ENST00000381337 LCE3AQ5TA76 89 aa4.87□□□□□ -1.63
THUMPD1-201ENST00000381337 PKHD1P08F94 4074 aa4.86□□□□□ -1.63
THUMPD1-201ENST00000381337 KRTAP10-12P60413 245 aa4.84□□□□□ -1.63
THUMPD1-201ENST00000381337 KRTAP12-3P60328 96 aa4.84□□□□□ -1.64
THUMPD1-201ENST00000381337 SACSQ9NZJ4 4579 aa4.83□□□□□ -1.64
THUMPD1-201ENST00000381337 LRP1Q07954 4544 aaKnown RBP4.83□□□□□ -1.64
THUMPD1-201ENST00000381337 VPS13BQ7Z7G8 4022 aa4.83□□□□□ -1.64
THUMPD1-201ENST00000381337 DYNC2H1Q8NCM8 4307 aaKnown RBP4.8□□□□□ -1.64
THUMPD1-201ENST00000381337 FRAS1Q86XX4 4008 aa4.8□□□□□ -1.64
THUMPD1-201ENST00000381337 APOBP04114 4563 aaKnown RBP4.8□□□□□ -1.64
THUMPD1-201ENST00000381337 KRTAP17-1Q9BYP8 105 aa4.75□□□□□ -1.65
THUMPD1-201ENST00000381337 RYR2Q92736 4967 aa4.74□□□□□ -1.65
THUMPD1-201ENST00000381337 KRTAP4-1Q9BYQ7 146 aa4.72□□□□□ -1.65
THUMPD1-201ENST00000381337 HECTD4Q9Y4D8 3996 aa4.69□□□□□ -1.66
THUMPD1-201ENST00000381337 EPPK1P58107 5090 aaKnown RBP4.68□□□□□ -1.66
THUMPD1-201ENST00000381337 FAT2Q9NYQ8 4349 aa4.67□□□□□ -1.66
THUMPD1-201ENST00000381337 HERC2O95714 4834 aa4.65□□□□□ -1.66
THUMPD1-201ENST00000381337 LRP2P98164 4655 aa4.6□□□□□ -1.67
THUMPD1-201ENST00000381337 SPRR2GQ9BYE4 73 aa4.55□□□□□ -1.68
THUMPD1-201ENST00000381337 PKD1P98161 4303 aa4.54□□□□□ -1.68
THUMPD1-201ENST00000381337 KRTAP8-1Q8IUC2 63 aa4.52□□□□□ -1.69
THUMPD1-201ENST00000381337 HSPG2P98160 4391 aa4.51□□□□□ -1.69
THUMPD1-201ENST00000381337 PCLOQ9Y6V0 5065 aa4.49□□□□□ -1.69
THUMPD1-201ENST00000381337 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
THUMPD1-201ENST00000381337 ABCA13Q86UQ4 5058 aa4.47□□□□□ -1.69
THUMPD1-201ENST00000381337 CRCT1Q9UGL9 99 aa4.46□□□□□ -1.7
THUMPD1-201ENST00000381337 LPAP08519 4548 aa4.45□□□□□ -1.7
THUMPD1-201ENST00000381337 LCE2BO14633 110 aa4.44□□□□□ -1.7
THUMPD1-201ENST00000381337 MT2AP02795 61 aa4.42□□□□□ -1.7
THUMPD1-201ENST00000381337 BIRC6Q9NR09 4857 aa4.42□□□□□ -1.7
THUMPD1-201ENST00000381337 HERC1Q15751 4861 aa4.42□□□□□ -1.7
THUMPD1-201ENST00000381337 RNF213Q63HN8 5207 aa4.39□□□□□ -1.71
THUMPD1-201ENST00000381337 MT1HP80294 61 aa4.38□□□□□ -1.71
THUMPD1-201ENST00000381337 MT1FP04733 61 aa4.37□□□□□ -1.71
THUMPD1-201ENST00000381337 MUC2Q02817 5179 aa4.37□□□□□ -1.71
THUMPD1-201ENST00000381337 KRTAP19-1Q8IUB9 90 aa4.37□□□□□ -1.71
THUMPD1-201ENST00000381337 KRTAP10-5P60370 271 aa4.34□□□□□ -1.71
THUMPD1-201ENST00000381337 LCE3CQ5T5A8 94 aa4.32□□□□□ -1.72
THUMPD1-201ENST00000381337 KRTAP19-5Q3LI72 72 aa4.31□□□□□ -1.72
THUMPD1-201ENST00000381337 FSIP2Q5CZC0 6907 aa4.29□□□□□ -1.72
THUMPD1-201ENST00000381337 UBR4Q5T4S7 5183 aa4.29□□□□□ -1.72
THUMPD1-201ENST00000381337 KRTAP19-8Q3LI54 63 aa4.24□□□□□ -1.73
THUMPD1-201ENST00000381337 PKHD1L1Q86WI1 4243 aa4.23□□□□□ -1.73
THUMPD1-201ENST00000381337 LOC100996750A0A140TA64 210 aa4.23□□□□□ -1.73
THUMPD1-201ENST00000381337 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
THUMPD1-201ENST00000381337 KRTAP10-7P60409 375 aaPredicted RBP4.22□□□□□ -1.73
THUMPD1-201ENST00000381337 LCE2AQ5TA79 106 aaPredicted RBP4.22□□□□□ -1.73
THUMPD1-201ENST00000381337 FAT4Q6V0I7 4981 aa4.21□□□□□ -1.74
THUMPD1-201ENST00000381337 MT1XP80297 61 aa4.18□□□□□ -1.74
THUMPD1-201ENST00000381337 TNXBP22105 4242 aa4.15□□□□□ -1.74
THUMPD1-201ENST00000381337 MT1BP07438 61 aa4.13□□□□□ -1.75
THUMPD1-201ENST00000381337 KRTAP19-4Q3LI73 84 aa4.11□□□□□ -1.75
THUMPD1-201ENST00000381337 KRTAP19-2Q3LHN2 52 aa4.09□□□□□ -1.75
THUMPD1-201ENST00000381337 LCE2CQ5TA81 110 aa4.06□□□□□ -1.76
THUMPD1-201ENST00000381337 KRTAP9-8Q9BYQ0 159 aa4.06□□□□□ -1.76
THUMPD1-201ENST00000381337 MUC17Q685J3 4493 aa4.01□□□□□ -1.77
THUMPD1-201ENST00000381337 HMCN2Q8NDA2 5059 aa4□□□□□ -1.77
THUMPD1-201ENST00000381337 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
THUMPD1-201ENST00000381337 KRTAP4-8A0A0G2JLE6 195 aa3.96□□□□□ -1.78
THUMPD1-201ENST00000381337 KRTAP4-8Q9BYQ9 185 aa3.96□□□□□ -1.78
THUMPD1-201ENST00000381337 KRTAP9-3Q9BYQ3 159 aa3.91□□□□□ -1.78
THUMPD1-201ENST00000381337 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
THUMPD1-201ENST00000381337 FLGP20930 4061 aaPredicted RBP3.88□□□□□ -1.79
THUMPD1-201ENST00000381337 KRTAP4-7Q9BYR0 210 aa3.85□□□□□ -1.79
THUMPD1-201ENST00000381337 MT1GP13640 62 aa3.85□□□□□ -1.79
THUMPD1-201ENST00000381337 SPRR2FQ96RM1 72 aa3.83□□□□□ -1.8
THUMPD1-201ENST00000381337 LCE3BQ5TA77 95 aa3.82□□□□□ -1.8
THUMPD1-201ENST00000381337 USH2AO75445 5202 aa3.81□□□□□ -1.8
THUMPD1-201ENST00000381337 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms