RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 Q5XG85 94 aa4.28□□□□□ -1.72
FAM49A-201ENST00000381323 CDC42SE1Q9NRR8 79 aa4.26□□□□□ -1.73
FAM49A-201ENST00000381323 LCE2AQ5TA79 106 aaPredicted RBP4.25□□□□□ -1.73
FAM49A-201ENST00000381323 ZCCHC13Q8WW36 166 aaKnown RBP4.24□□□□□ -1.73
FAM49A-201ENST00000381323 LPAP08519 4548 aa4.24□□□□□ -1.73
FAM49A-201ENST00000381323 LINC01558Q9Y6Z2 57 aa4.22□□□□□ -1.73
FAM49A-201ENST00000381323 Q75L30 129 aa4.22□□□□□ -1.73
FAM49A-201ENST00000381323 HRES1P13985 223 aa4.21□□□□□ -1.74
FAM49A-201ENST00000381323 KRTAP9-2Q9BYQ4 174 aa4.2□□□□□ -1.74
FAM49A-201ENST00000381323 CRIPTQ9P021 101 aa4.2□□□□□ -1.74
FAM49A-201ENST00000381323 KTN1-AS1Q86SY8 53 aa4.19□□□□□ -1.74
FAM49A-201ENST00000381323 LCA10Q71F78 164 aa4.17□□□□□ -1.74
FAM49A-201ENST00000381323 Q5W150 140 aa4.16□□□□□ -1.74
FAM49A-201ENST00000381323 Q8N9P0 234 aaPredicted RBP4.16□□□□□ -1.74
FAM49A-201ENST00000381323 DMAC1Q96GE9 116 aa4.15□□□□□ -1.75
FAM49A-201ENST00000381323 A0A1B0GU33 70 aa4.14□□□□□ -1.75
FAM49A-201ENST00000381323 KRTAP4-1Q9BYQ7 146 aa4.14□□□□□ -1.75
FAM49A-201ENST00000381323 CSAG1Q6PB30 78 aa4.13□□□□□ -1.75
FAM49A-201ENST00000381323 FAT4Q6V0I7 4981 aa4.11□□□□□ -1.75
FAM49A-201ENST00000381323 KRTAP9-6A0A140TA67 174 aa4.1□□□□□ -1.75
FAM49A-201ENST00000381323 SPINK7P58062 85 aa4.1□□□□□ -1.75
FAM49A-201ENST00000381323 SPINT4Q6UDR6 99 aa4.1□□□□□ -1.75
FAM49A-201ENST00000381323 C20orf166-AS1Q96NR2 134 aa4.1□□□□□ -1.75
FAM49A-201ENST00000381323 S4R3F8 94 aa4.1□□□□□ -1.75
FAM49A-201ENST00000381323 A8MUU9 505 aa4.09□□□□□ -1.75
FAM49A-201ENST00000381323 MUC2Q02817 5179 aa4.08□□□□□ -1.76
FAM49A-201ENST00000381323 MT1HP80294 61 aa4.06□□□□□ -1.76
FAM49A-201ENST00000381323 Q5VV11 94 aa4.06□□□□□ -1.76
FAM49A-201ENST00000381323 CYSTM1Q9H1C7 97 aa4.03□□□□□ -1.76
FAM49A-201ENST00000381323 LCE2CQ5TA81 110 aa4.03□□□□□ -1.76
FAM49A-201ENST00000381323 CRCT1Q9UGL9 99 aa4.02□□□□□ -1.77
FAM49A-201ENST00000381323 KRTAP10-10P60014 251 aa4.02□□□□□ -1.77
FAM49A-201ENST00000381323 KRTAP10-6P60371 365 aaPredicted RBP4.02□□□□□ -1.77
FAM49A-201ENST00000381323 NOTCH2NLQ7Z3S9 236 aa4.01□□□□□ -1.77
FAM49A-201ENST00000381323 LORP23490 312 aaPredicted RBP4□□□□□ -1.77
FAM49A-201ENST00000381323 A0A0D9SG42 100 aa4□□□□□ -1.77
FAM49A-201ENST00000381323 H1FX-AS1Q4G0G2 97 aa3.98□□□□□ -1.77
FAM49A-201ENST00000381323 CAMK2N1Q7Z7J9 78 aa3.98□□□□□ -1.77
FAM49A-201ENST00000381323 FSIP2Q5CZC0 6907 aa3.98□□□□□ -1.77
FAM49A-201ENST00000381323 MUC17Q685J3 4493 aa3.97□□□□□ -1.77
FAM49A-201ENST00000381323 LINC01554Q52M75 96 aa3.97□□□□□ -1.77
FAM49A-201ENST00000381323 SPATA8Q6RVD6 105 aa3.96□□□□□ -1.78
FAM49A-201ENST00000381323 R4GN34 69 aa3.96□□□□□ -1.78
FAM49A-201ENST00000381323 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
FAM49A-201ENST00000381323 KRTAP16-1A8MUX0 517 aa3.93□□□□□ -1.78
FAM49A-201ENST00000381323 ROMO1P60602 79 aa3.93□□□□□ -1.78
FAM49A-201ENST00000381323 M0QZ58 72 aa3.91□□□□□ -1.78
FAM49A-201ENST00000381323 KRTAP19-2Q3LHN2 52 aa3.89□□□□□ -1.79
FAM49A-201ENST00000381323 ADM2Q7Z4H4 148 aa3.85□□□□□ -1.79
FAM49A-201ENST00000381323 PLAC4Q8WY50 150 aa3.83□□□□□ -1.8
FAM49A-201ENST00000381323 A6NN06 94 aa3.8□□□□□ -1.8
FAM49A-201ENST00000381323 MT2AP02795 61 aa3.8□□□□□ -1.8
FAM49A-201ENST00000381323 PRAC1Q96KF2 57 aa3.78□□□□□ -1.8
FAM49A-201ENST00000381323 KRTAP9-8Q9BYQ0 159 aa3.76□□□□□ -1.81
FAM49A-201ENST00000381323 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
FAM49A-201ENST00000381323 MT1FP04733 61 aa3.75□□□□□ -1.81
FAM49A-201ENST00000381323 KRTAP25-1Q3LHN0 102 aa3.74□□□□□ -1.81
FAM49A-201ENST00000381323 FLGP20930 4061 aaPredicted RBP3.73□□□□□ -1.81
FAM49A-201ENST00000381323 KRTAP9-7A8MTY7 169 aa3.71□□□□□ -1.82
FAM49A-201ENST00000381323 PP632Q6XCG6 107 aa3.7□□□□□ -1.82
FAM49A-201ENST00000381323 KRTAP19-1Q8IUB9 90 aa3.69□□□□□ -1.82
FAM49A-201ENST00000381323 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.67□□□□□ -1.82
FAM49A-201ENST00000381323 TNP1P09430 55 aa3.66□□□□□ -1.82
FAM49A-201ENST00000381323 KRTAP9-3Q9BYQ3 159 aa3.65□□□□□ -1.82
FAM49A-201ENST00000381323 A8MU10 97 aa3.65□□□□□ -1.83
FAM49A-201ENST00000381323 LOC100996750A0A140TA64 210 aa3.6□□□□□ -1.83
FAM49A-201ENST00000381323 KRTAP4-6Q9BYQ5 205 aa3.6□□□□□ -1.83
FAM49A-201ENST00000381323 H0YAA0 97 aa3.57□□□□□ -1.84
FAM49A-201ENST00000381323 USH2AO75445 5202 aa3.57□□□□□ -1.84
FAM49A-201ENST00000381323 PRO2289Q9P1D8 64 aa3.56□□□□□ -1.84
FAM49A-201ENST00000381323 H3BS24 57 aa3.56□□□□□ -1.84
FAM49A-201ENST00000381323 KRTAP19-6Q3LI70 58 aa3.55□□□□□ -1.84
FAM49A-201ENST00000381323 KRTAP3-1Q9BYR8 98 aa3.54□□□□□ -1.84
FAM49A-201ENST00000381323 SSPOA2VEC9 5147 aa3.52□□□□□ -1.85
FAM49A-201ENST00000381323 FCGBPQ9Y6R7 5405 aaPredicted RBP3.49□□□□□ -1.85
FAM49A-201ENST00000381323 P0C880 135 aa3.46□□□□□ -1.86
FAM49A-201ENST00000381323 SYNE2Q8WXH0 6885 aaKnown RBP3.45□□□□□ -1.86
FAM49A-201ENST00000381323 SPRR2GQ9BYE4 73 aa3.45□□□□□ -1.86
FAM49A-201ENST00000381323 KRTAP6-3Q3LI67 103 aa3.44□□□□□ -1.86
FAM49A-201ENST00000381323 MACF1Q9UPN3 7388 aaKnown RBP3.43□□□□□ -1.86
FAM49A-201ENST00000381323 KRTAP19-8Q3LI54 63 aa3.4□□□□□ -1.87
FAM49A-201ENST00000381323 NDUFAF8A1L188 74 aa3.4□□□□□ -1.87
FAM49A-201ENST00000381323 MT1BP07438 61 aa3.39□□□□□ -1.87
FAM49A-201ENST00000381323 KRTAP10-5P60370 271 aa3.39□□□□□ -1.87
FAM49A-201ENST00000381323 KRTAP13-4Q3LI77 160 aa3.38□□□□□ -1.87
FAM49A-201ENST00000381323 C10orf95Q9H7T3 257 aa3.38□□□□□ -1.87
FAM49A-201ENST00000381323 KRTAP8-1Q8IUC2 63 aa3.35□□□□□ -1.87
FAM49A-201ENST00000381323 SPRR2FQ96RM1 72 aa3.35□□□□□ -1.87
FAM49A-201ENST00000381323 KRTAP12-1P59990 96 aa3.34□□□□□ -1.88
FAM49A-201ENST00000381323 KRTAP4-12Q9BQ66 201 aa3.32□□□□□ -1.88
FAM49A-201ENST00000381323 KRTAP20-1Q3LI63 56 aa3.32□□□□□ -1.88
FAM49A-201ENST00000381323 KRTAP4-8Q9BYQ9 185 aa3.32□□□□□ -1.88
FAM49A-201ENST00000381323 KRTAP12-2P59991 146 aa3.31□□□□□ -1.88
FAM49A-201ENST00000381323 SPRR2EP22531 72 aa3.29□□□□□ -1.88
FAM49A-201ENST00000381323 SPRR2BP35325 72 aa3.29□□□□□ -1.88
FAM49A-201ENST00000381323 SPRR2AP35326 72 aa3.29□□□□□ -1.88
FAM49A-201ENST00000381323 KRTAP23-1A1A580 65 aa3.24□□□□□ -1.89
FAM49A-201ENST00000381323 NEBP20929 6669 aa3.23□□□□□ -1.89
FAM49A-201ENST00000381323 SPRR2DP22532 72 aa3.19□□□□□ -1.9
FAM49A-201ENST00000381323 MT1XP80297 61 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms