RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 HERC2O95714 4834 aa6.43□□□□□ -1.38
PITRM1-202ENST00000380989 LINC00304Q8N9R0 145 aa6.42□□□□□ -1.38
PITRM1-202ENST00000380989 PCLOQ9Y6V0 5065 aa6.39□□□□□ -1.39
PITRM1-202ENST00000380989 KRTAP16-1A8MUX0 517 aa6.38□□□□□ -1.39
PITRM1-202ENST00000380989 KRTAP10-8P60410 259 aa6.35□□□□□ -1.39
PITRM1-202ENST00000380989 MT1HL1P0DM35 61 aa6.34□□□□□ -1.39
PITRM1-202ENST00000380989 H0YAA0 97 aa6.33□□□□□ -1.4
PITRM1-202ENST00000380989 C9orf92A6NGG3 77 aa6.3□□□□□ -1.4
PITRM1-202ENST00000380989 LPAP08519 4548 aa6.27□□□□□ -1.41
PITRM1-202ENST00000380989 HERC1Q15751 4861 aa6.24□□□□□ -1.41
PITRM1-202ENST00000380989 RPS29P62273 56 aaKnown RBP6.21□□□□□ -1.42
PITRM1-202ENST00000380989 KRTAP3-1Q9BYR8 98 aa6.21□□□□□ -1.42
PITRM1-202ENST00000380989 A8MUU9 505 aa6.2□□□□□ -1.42
PITRM1-202ENST00000380989 J3QL48 77 aa6.18□□□□□ -1.42
PITRM1-202ENST00000380989 LRP2P98164 4655 aa6.17□□□□□ -1.42
PITRM1-202ENST00000380989 A0A1B0GU33 70 aa6.15□□□□□ -1.42
PITRM1-202ENST00000380989 KRTAP25-1Q3LHN0 102 aa6.15□□□□□ -1.42
PITRM1-202ENST00000380989 A0A0D9SG42 100 aa6.12□□□□□ -1.43
PITRM1-202ENST00000380989 ROMO1P60602 79 aa6.12□□□□□ -1.43
PITRM1-202ENST00000380989 P0C880 135 aa6.1□□□□□ -1.43
PITRM1-202ENST00000380989 C10orf95Q9H7T3 257 aa6.09□□□□□ -1.44
PITRM1-202ENST00000380989 H1FX-AS1Q4G0G2 97 aa6.08□□□□□ -1.44
PITRM1-202ENST00000380989 COX6B2Q6YFQ2 88 aa6.06□□□□□ -1.44
PITRM1-202ENST00000380989 KRTAP13-4Q3LI77 160 aa6.04□□□□□ -1.44
PITRM1-202ENST00000380989 XP32Q5T750 250 aa6.03□□□□□ -1.44
PITRM1-202ENST00000380989 MUC2Q02817 5179 aa6.03□□□□□ -1.44
PITRM1-202ENST00000380989 HMCN2Q8NDA2 5059 aa6.01□□□□□ -1.45
PITRM1-202ENST00000380989 C20orf166-AS1Q96NR2 134 aa6□□□□□ -1.45
PITRM1-202ENST00000380989 TPRXLQ17RH7 258 aa5.97□□□□□ -1.45
PITRM1-202ENST00000380989 RPL37P61927 97 aaKnown RBP5.93□□□□□ -1.46
PITRM1-202ENST00000380989 SPINT4Q6UDR6 99 aa5.93□□□□□ -1.46
PITRM1-202ENST00000380989 UBR4Q5T4S7 5183 aa5.92□□□□□ -1.46
PITRM1-202ENST00000380989 KRTAP10-6P60371 365 aaPredicted RBP5.91□□□□□ -1.46
PITRM1-202ENST00000380989 RNF213Q63HN8 5207 aa5.9□□□□□ -1.46
PITRM1-202ENST00000380989 KRTAP3-3Q9BYR6 98 aa5.88□□□□□ -1.47
PITRM1-202ENST00000380989 K7ERS5 55 aa5.87□□□□□ -1.47
PITRM1-202ENST00000380989 NDUFAF8A1L188 74 aa5.86□□□□□ -1.47
PITRM1-202ENST00000380989 KRTAP3-2Q9BYR7 98 aa5.83□□□□□ -1.48
PITRM1-202ENST00000380989 KRTAP12-2P59991 146 aa5.83□□□□□ -1.48
PITRM1-202ENST00000380989 MUC17Q685J3 4493 aa5.82□□□□□ -1.48
PITRM1-202ENST00000380989 KRTAP4-1Q9BYQ7 146 aa5.82□□□□□ -1.48
PITRM1-202ENST00000380989 FAT4Q6V0I7 4981 aa5.74□□□□□ -1.49
PITRM1-202ENST00000380989 S4R3F8 94 aa5.73□□□□□ -1.49
PITRM1-202ENST00000380989 SEC61BP60468 96 aaKnown RBP5.73□□□□□ -1.49
PITRM1-202ENST00000380989 KRTAP15-1Q3LI76 137 aa5.69□□□□□ -1.5
PITRM1-202ENST00000380989 KRTAP12-1P59990 96 aa5.65□□□□□ -1.5
PITRM1-202ENST00000380989 KRTAP19-2Q3LHN2 52 aa5.56□□□□□ -1.52
PITRM1-202ENST00000380989 FLGP20930 4061 aaPredicted RBP5.5□□□□□ -1.53
PITRM1-202ENST00000380989 LORP23490 312 aaPredicted RBP5.5□□□□□ -1.53
PITRM1-202ENST00000380989 M0QZ58 72 aa5.47□□□□□ -1.53
PITRM1-202ENST00000380989 LCE2CQ5TA81 110 aa5.47□□□□□ -1.53
PITRM1-202ENST00000380989 R4GN34 69 aa5.38□□□□□ -1.55
PITRM1-202ENST00000380989 MT1HP80294 61 aa5.35□□□□□ -1.55
PITRM1-202ENST00000380989 M0R2T5 61 aa5.33□□□□□ -1.56
PITRM1-202ENST00000380989 PLAC4Q8WY50 150 aa5.33□□□□□ -1.56
PITRM1-202ENST00000380989 A0A0A0MQY5 61 aa5.25□□□□□ -1.57
PITRM1-202ENST00000380989 LUZP6Q538Z0 58 aa5.21□□□□□ -1.58
PITRM1-202ENST00000380989 CAMK2N1Q7Z7J9 78 aa5.17□□□□□ -1.58
PITRM1-202ENST00000380989 KRTAP9-8Q9BYQ0 159 aa5.15□□□□□ -1.59
PITRM1-202ENST00000380989 MT1FP04733 61 aa5.14□□□□□ -1.59
PITRM1-202ENST00000380989 MT2AP02795 61 aa5.13□□□□□ -1.59
PITRM1-202ENST00000380989 LCE2AQ5TA79 106 aaPredicted RBP5.13□□□□□ -1.59
PITRM1-202ENST00000380989 KRTAP10-10P60014 251 aa5.1□□□□□ -1.59
PITRM1-202ENST00000380989 USH2AO75445 5202 aa5.06□□□□□ -1.6
PITRM1-202ENST00000380989 FSIP2Q5CZC0 6907 aa5.02□□□□□ -1.61
PITRM1-202ENST00000380989 KRTAP19-1Q8IUB9 90 aa5□□□□□ -1.61
PITRM1-202ENST00000380989 KRTAP9-3Q9BYQ3 159 aa4.94□□□□□ -1.62
PITRM1-202ENST00000380989 SPRR2GQ9BYE4 73 aa4.92□□□□□ -1.62
PITRM1-202ENST00000380989 LCE2BO14633 110 aa4.88□□□□□ -1.63
PITRM1-202ENST00000380989 PP632Q6XCG6 107 aa4.87□□□□□ -1.63
PITRM1-202ENST00000380989 TNP1P09430 55 aa4.86□□□□□ -1.63
PITRM1-202ENST00000380989 KMT2DO14686 5537 aa4.82□□□□□ -1.64
PITRM1-202ENST00000380989 MT1BP07438 61 aa4.82□□□□□ -1.64
PITRM1-202ENST00000380989 KRTAP19-8Q3LI54 63 aa4.78□□□□□ -1.64
PITRM1-202ENST00000380989 SSPOA2VEC9 5147 aa4.78□□□□□ -1.64
PITRM1-202ENST00000380989 LCE3AQ5TA76 89 aa4.77□□□□□ -1.65
PITRM1-202ENST00000380989 SPRR5A0A1B0GTR4 108 aa4.74□□□□□ -1.65
PITRM1-202ENST00000380989 MT1XP80297 61 aa4.66□□□□□ -1.66
PITRM1-202ENST00000380989 KRTAP10-5P60370 271 aa4.65□□□□□ -1.66
PITRM1-202ENST00000380989 LCE2DQ5TA82 110 aaPredicted RBP4.57□□□□□ -1.68
PITRM1-202ENST00000380989 KRTAP9-2Q9BYQ4 174 aa4.57□□□□□ -1.68
PITRM1-202ENST00000380989 FCGBPQ9Y6R7 5405 aaPredicted RBP4.54□□□□□ -1.68
PITRM1-202ENST00000380989 KRTAP10-7P60409 375 aaPredicted RBP4.53□□□□□ -1.68
PITRM1-202ENST00000380989 KRTAP23-1A1A580 65 aa4.48□□□□□ -1.69
PITRM1-202ENST00000380989 PRO2289Q9P1D8 64 aa4.48□□□□□ -1.69
PITRM1-202ENST00000380989 KRTAP19-6Q3LI70 58 aa4.46□□□□□ -1.7
PITRM1-202ENST00000380989 KRTAP4-8A0A0G2JLE6 195 aa4.43□□□□□ -1.7
PITRM1-202ENST00000380989 KRTAP4-8Q9BYQ9 185 aa4.43□□□□□ -1.7
PITRM1-202ENST00000380989 KRTAP12-3P60328 96 aa4.42□□□□□ -1.7
PITRM1-202ENST00000380989 MACF1Q9UPN3 7388 aaKnown RBP4.41□□□□□ -1.7
PITRM1-202ENST00000380989 KRTAP8-1Q8IUC2 63 aa4.4□□□□□ -1.71
PITRM1-202ENST00000380989 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
PITRM1-202ENST00000380989 KRTAP10-12P60413 245 aa4.38□□□□□ -1.71
PITRM1-202ENST00000380989 CRCT1Q9UGL9 99 aa4.37□□□□□ -1.71
PITRM1-202ENST00000380989 MUC12Q9UKN1 5478 aa4.27□□□□□ -1.73
PITRM1-202ENST00000380989 KRTAP4-7Q9BYR0 210 aa4.27□□□□□ -1.73
PITRM1-202ENST00000380989 KRTAP9-6A8MVA2 160 aa4.25□□□□□ -1.73
PITRM1-202ENST00000380989 INE1O15225 51 aa4.25□□□□□ -1.73
PITRM1-202ENST00000380989 KRTAP19-5Q3LI72 72 aa4.25□□□□□ -1.73
PITRM1-202ENST00000380989 DSTQ03001 7570 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms