RNA–Protein interactions for RNA: ENST00000380850.8

TTC39B-202, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-202ENST00000380850 KRTAP4-5Q9BYR2 181 aa6.69□□□□□ -1.34
TTC39B-202ENST00000380850 KTN1-AS1Q86SY8 53 aa6.68□□□□□ -1.34
TTC39B-202ENST00000380850 C20orf166-AS1Q96NR2 134 aa6.67□□□□□ -1.34
TTC39B-202ENST00000380850 RBM12B-AS1Q9P1G2 102 aa6.65□□□□□ -1.34
TTC39B-202ENST00000380850 ABCA13Q86UQ4 5058 aa6.65□□□□□ -1.34
TTC39B-202ENST00000380850 A0A1B0GU33 70 aa6.62□□□□□ -1.35
TTC39B-202ENST00000380850 XP32Q5T750 250 aa6.62□□□□□ -1.35
TTC39B-202ENST00000380850 H0YAA0 97 aa6.59□□□□□ -1.35
TTC39B-202ENST00000380850 COX6B2Q6YFQ2 88 aa6.59□□□□□ -1.35
TTC39B-202ENST00000380850 TNXBP22105 4242 aa6.57□□□□□ -1.36
TTC39B-202ENST00000380850 RPS29P62273 56 aaKnown RBP6.56□□□□□ -1.36
TTC39B-202ENST00000380850 CSAG1Q6PB30 78 aa6.56□□□□□ -1.36
TTC39B-202ENST00000380850 LINC01554Q52M75 96 aa6.55□□□□□ -1.36
TTC39B-202ENST00000380850 MUC2Q02817 5179 aa6.55□□□□□ -1.36
TTC39B-202ENST00000380850 RPL37P61927 97 aaKnown RBP6.52□□□□□ -1.37
TTC39B-202ENST00000380850 MT1HL1P0DM35 61 aa6.51□□□□□ -1.37
TTC39B-202ENST00000380850 H1FX-AS1Q4G0G2 97 aa6.5□□□□□ -1.37
TTC39B-202ENST00000380850 J3QL48 77 aa6.5□□□□□ -1.37
TTC39B-202ENST00000380850 P0C880 135 aa6.49□□□□□ -1.37
TTC39B-202ENST00000380850 S4R3F8 94 aa6.48□□□□□ -1.37
TTC39B-202ENST00000380850 SPINT4Q6UDR6 99 aa6.47□□□□□ -1.37
TTC39B-202ENST00000380850 HERC2O95714 4834 aa6.44□□□□□ -1.38
TTC39B-202ENST00000380850 KRTAP13-4Q3LI77 160 aa6.44□□□□□ -1.38
TTC39B-202ENST00000380850 KRTAP3-3Q9BYR6 98 aa6.4□□□□□ -1.39
TTC39B-202ENST00000380850 K7ERS5 55 aa6.36□□□□□ -1.39
TTC39B-202ENST00000380850 C10orf95Q9H7T3 257 aa6.35□□□□□ -1.39
TTC39B-202ENST00000380850 HERC1Q15751 4861 aa6.34□□□□□ -1.39
TTC39B-202ENST00000380850 KRTAP10-6P60371 365 aaPredicted RBP6.33□□□□□ -1.4
TTC39B-202ENST00000380850 KRTAP3-2Q9BYR7 98 aa6.27□□□□□ -1.41
TTC39B-202ENST00000380850 RNF213Q63HN8 5207 aa6.25□□□□□ -1.41
TTC39B-202ENST00000380850 FAT4Q6V0I7 4981 aa6.25□□□□□ -1.41
TTC39B-202ENST00000380850 M0QZ58 72 aa6.22□□□□□ -1.41
TTC39B-202ENST00000380850 KRTAP4-1Q9BYQ7 146 aa6.22□□□□□ -1.41
TTC39B-202ENST00000380850 KRTAP12-2P59991 146 aa6.21□□□□□ -1.41
TTC39B-202ENST00000380850 TPRXLQ17RH7 258 aa6.18□□□□□ -1.42
TTC39B-202ENST00000380850 LORP23490 312 aaPredicted RBP6.17□□□□□ -1.42
TTC39B-202ENST00000380850 R4GN34 69 aa6.16□□□□□ -1.42
TTC39B-202ENST00000380850 PCLOQ9Y6V0 5065 aa6.14□□□□□ -1.43
TTC39B-202ENST00000380850 ROMO1P60602 79 aa6.13□□□□□ -1.43
TTC39B-202ENST00000380850 KRTAP25-1Q3LHN0 102 aa6.13□□□□□ -1.43
TTC39B-202ENST00000380850 SEC61BP60468 96 aaKnown RBP6.1□□□□□ -1.43
TTC39B-202ENST00000380850 UBR4Q5T4S7 5183 aa6.07□□□□□ -1.44
TTC39B-202ENST00000380850 KRTAP12-1P59990 96 aa6.05□□□□□ -1.44
TTC39B-202ENST00000380850 M0R2T5 61 aa5.99□□□□□ -1.45
TTC39B-202ENST00000380850 BIRC6Q9NR09 4857 aa5.99□□□□□ -1.45
TTC39B-202ENST00000380850 CAMK2N1Q7Z7J9 78 aa5.95□□□□□ -1.46
TTC39B-202ENST00000380850 MUC17Q685J3 4493 aa5.95□□□□□ -1.46
TTC39B-202ENST00000380850 HMCN2Q8NDA2 5059 aa5.88□□□□□ -1.47
TTC39B-202ENST00000380850 H3BS24 57 aa5.83□□□□□ -1.48
TTC39B-202ENST00000380850 NDUFAF8A1L188 74 aa5.73□□□□□ -1.49
TTC39B-202ENST00000380850 KRTAP19-2Q3LHN2 52 aa5.7□□□□□ -1.5
TTC39B-202ENST00000380850 FLGP20930 4061 aaPredicted RBP5.67□□□□□ -1.5
TTC39B-202ENST00000380850 KRTAP10-10P60014 251 aa5.65□□□□□ -1.51
TTC39B-202ENST00000380850 FSIP2Q5CZC0 6907 aa5.63□□□□□ -1.51
TTC39B-202ENST00000380850 USH2AO75445 5202 aa5.61□□□□□ -1.51
TTC39B-202ENST00000380850 LCE2CQ5TA81 110 aa5.53□□□□□ -1.52
TTC39B-202ENST00000380850 PLAC4Q8WY50 150 aa5.52□□□□□ -1.53
TTC39B-202ENST00000380850 MT1HP80294 61 aa5.49□□□□□ -1.53
TTC39B-202ENST00000380850 KRTAP15-1Q3LI76 137 aa5.48□□□□□ -1.53
TTC39B-202ENST00000380850 MT1FP04733 61 aa5.46□□□□□ -1.54
TTC39B-202ENST00000380850 TNP1P09430 55 aa5.45□□□□□ -1.54
TTC39B-202ENST00000380850 KMT2DO14686 5537 aa5.42□□□□□ -1.54
TTC39B-202ENST00000380850 MT2AP02795 61 aa5.4□□□□□ -1.55
TTC39B-202ENST00000380850 KRTAP19-1Q8IUB9 90 aa5.4□□□□□ -1.55
TTC39B-202ENST00000380850 LCE3AQ5TA76 89 aa5.29□□□□□ -1.56
TTC39B-202ENST00000380850 LUZP6Q538Z0 58 aa5.28□□□□□ -1.56
TTC39B-202ENST00000380850 KRTAP9-8Q9BYQ0 159 aa5.27□□□□□ -1.57
TTC39B-202ENST00000380850 SPRR2GQ9BYE4 73 aa5.22□□□□□ -1.57
TTC39B-202ENST00000380850 PP632Q6XCG6 107 aa5.18□□□□□ -1.58
TTC39B-202ENST00000380850 MT1BP07438 61 aa5.13□□□□□ -1.59
TTC39B-202ENST00000380850 KRTAP10-7P60409 375 aaPredicted RBP5.12□□□□□ -1.59
TTC39B-202ENST00000380850 MT1XP80297 61 aa5.08□□□□□ -1.6
TTC39B-202ENST00000380850 KRTAP10-5P60370 271 aa5.06□□□□□ -1.6
TTC39B-202ENST00000380850 KRTAP10-12P60413 245 aa5.03□□□□□ -1.6
TTC39B-202ENST00000380850 KRTAP9-3Q9BYQ3 159 aa5.02□□□□□ -1.61
TTC39B-202ENST00000380850 KRTAP4-8A0A0G2JLE6 195 aa5.02□□□□□ -1.61
TTC39B-202ENST00000380850 KRTAP4-8Q9BYQ9 185 aa5.02□□□□□ -1.61
TTC39B-202ENST00000380850 LCE2BO14633 110 aa5.01□□□□□ -1.61
TTC39B-202ENST00000380850 DSTQ03001 7570 aaKnown RBP4.98□□□□□ -1.61
TTC39B-202ENST00000380850 KRTAP12-3P60328 96 aa4.96□□□□□ -1.62
TTC39B-202ENST00000380850 KRTAP19-8Q3LI54 63 aa4.94□□□□□ -1.62
TTC39B-202ENST00000380850 PRO2289Q9P1D8 64 aa4.87□□□□□ -1.63
TTC39B-202ENST00000380850 KRTAP19-5Q3LI72 72 aa4.86□□□□□ -1.63
TTC39B-202ENST00000380850 SSPOA2VEC9 5147 aa4.85□□□□□ -1.63
TTC39B-202ENST00000380850 OBSCNQ5VST9 7968 aa4.85□□□□□ -1.63
TTC39B-202ENST00000380850 A0A0A0MQY5 61 aa4.84□□□□□ -1.64
TTC39B-202ENST00000380850 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
TTC39B-202ENST00000380850 MUC12Q9UKN1 5478 aa4.82□□□□□ -1.64
TTC39B-202ENST00000380850 KRTAP8-1Q8IUC2 63 aa4.8□□□□□ -1.64
TTC39B-202ENST00000380850 FCGBPQ9Y6R7 5405 aaPredicted RBP4.79□□□□□ -1.64
TTC39B-202ENST00000380850 SYNE1Q8NF91 8797 aaKnown RBP4.76□□□□□ -1.65
TTC39B-202ENST00000380850 LCE2AQ5TA79 106 aaPredicted RBP4.74□□□□□ -1.65
TTC39B-202ENST00000380850 CRCT1Q9UGL9 99 aa4.72□□□□□ -1.65
TTC39B-202ENST00000380850 KRTAP23-1A1A580 65 aa4.71□□□□□ -1.66
TTC39B-202ENST00000380850 SPRR5A0A1B0GTR4 108 aa4.67□□□□□ -1.66
TTC39B-202ENST00000380850 LCE2DQ5TA82 110 aaPredicted RBP4.61□□□□□ -1.67
TTC39B-202ENST00000380850 SYNE2Q8WXH0 6885 aaKnown RBP4.56□□□□□ -1.68
TTC39B-202ENST00000380850 KRTAP4-3Q9BYR4 195 aa4.56□□□□□ -1.68
TTC39B-202ENST00000380850 LCE3CQ5T5A8 94 aa4.55□□□□□ -1.68
TTC39B-202ENST00000380850 KRTAP9-6A8MVA2 160 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms