RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 TP53AIP1Q9HCN2 124 aa4.53□□□□□ -1.68
HMGN1-202ENST00000380747 MACF1Q9UPN3 7388 aaKnown RBP4.52□□□□□ -1.69
HMGN1-202ENST00000380747 SYNE2Q8WXH0 6885 aaKnown RBP4.51□□□□□ -1.69
HMGN1-202ENST00000380747 LINC00643Q86TS7 51 aa4.51□□□□□ -1.69
HMGN1-202ENST00000380747 H1FX-AS1Q4G0G2 97 aa4.5□□□□□ -1.69
HMGN1-202ENST00000380747 C4orf26Q17RF5 130 aa4.49□□□□□ -1.69
HMGN1-202ENST00000380747 J3QR89 54 aa4.48□□□□□ -1.69
HMGN1-202ENST00000380747 A0A087WVE0 104 aa4.47□□□□□ -1.69
HMGN1-202ENST00000380747 MT2AP02795 61 aa4.47□□□□□ -1.69
HMGN1-202ENST00000380747 TRAV22A0A0B4J277 110 aa4.45□□□□□ -1.7
HMGN1-202ENST00000380747 MT1FP04733 61 aa4.44□□□□□ -1.7
HMGN1-202ENST00000380747 KRTAP10-10P60014 251 aa4.44□□□□□ -1.7
HMGN1-202ENST00000380747 PRAC1Q96KF2 57 aa4.44□□□□□ -1.7
HMGN1-202ENST00000380747 LOC101927531A0A1B0GV80 90 aa4.43□□□□□ -1.7
HMGN1-202ENST00000380747 UQCRQO14949 82 aa4.43□□□□□ -1.7
HMGN1-202ENST00000380747 C1orf64Q8NEQ6 169 aa4.43□□□□□ -1.7
HMGN1-202ENST00000380747 CYP4F30PQ9H0H9 118 aa4.42□□□□□ -1.7
HMGN1-202ENST00000380747 H0Y9P7 68 aa4.41□□□□□ -1.7
HMGN1-202ENST00000380747 ATOX1O00244 68 aa4.39□□□□□ -1.71
HMGN1-202ENST00000380747 S4R3F8 94 aa4.38□□□□□ -1.71
HMGN1-202ENST00000380747 C5orf47Q569G3 176 aa4.37□□□□□ -1.71
HMGN1-202ENST00000380747 K7ERU9 68 aa4.35□□□□□ -1.71
HMGN1-202ENST00000380747 SCGB1A1P11684 91 aa4.35□□□□□ -1.71
HMGN1-202ENST00000380747 MP68P56378 58 aa4.35□□□□□ -1.71
HMGN1-202ENST00000380747 KRTAP19-6Q3LI70 58 aa4.35□□□□□ -1.71
HMGN1-202ENST00000380747 LINC00208Q96KT6 92 aa4.35□□□□□ -1.71
HMGN1-202ENST00000380747 OCR1Q9BZK8 76 aa4.35□□□□□ -1.71
HMGN1-202ENST00000380747 KRTAP6-3Q3LI67 103 aa4.34□□□□□ -1.71
HMGN1-202ENST00000380747 LCA10Q71F78 164 aa4.34□□□□□ -1.71
HMGN1-202ENST00000380747 CSAG1Q6PB30 78 aa4.33□□□□□ -1.72
HMGN1-202ENST00000380747 MT-ATP8P03928 68 aa4.31□□□□□ -1.72
HMGN1-202ENST00000380747 KLKP1Q107X0 134 aa4.3□□□□□ -1.72
HMGN1-202ENST00000380747 IMUPQ9GZP8 106 aa4.3□□□□□ -1.72
HMGN1-202ENST00000380747 NEBP20929 6669 aa4.29□□□□□ -1.72
HMGN1-202ENST00000380747 FAM236AA0A1B0GUQ0 79 aa4.29□□□□□ -1.72
HMGN1-202ENST00000380747 FAM236BA0A1B0GV22 79 aa4.29□□□□□ -1.72
HMGN1-202ENST00000380747 H3BPC8 53 aa4.28□□□□□ -1.72
HMGN1-202ENST00000380747 MUC12Q9UKN1 5478 aa4.27□□□□□ -1.73
HMGN1-202ENST00000380747 A8MUN3 132 aa4.25□□□□□ -1.73
HMGN1-202ENST00000380747 MT3P25713 68 aa4.25□□□□□ -1.73
HMGN1-202ENST00000380747 NDUFC1O43677 76 aa4.24□□□□□ -1.73
HMGN1-202ENST00000380747 SMIM20Q8N5G0 67 aa4.23□□□□□ -1.73
HMGN1-202ENST00000380747 TRAV7A0A075B6U4 112 aa4.22□□□□□ -1.73
HMGN1-202ENST00000380747 KRTAP2-2Q9BYT5 123 aa4.22□□□□□ -1.73
HMGN1-202ENST00000380747 KRTAP20-1Q3LI63 56 aa4.2□□□□□ -1.74
HMGN1-202ENST00000380747 DMAC1Q96GE9 116 aa4.17□□□□□ -1.74
HMGN1-202ENST00000380747 NDUFAF8A1L188 74 aa4.16□□□□□ -1.74
HMGN1-202ENST00000380747 MDN1Q9NU22 5596 aa4.15□□□□□ -1.75
HMGN1-202ENST00000380747 ADM2Q7Z4H4 148 aa4.14□□□□□ -1.75
HMGN1-202ENST00000380747 SPRR2GQ9BYE4 73 aa4.14□□□□□ -1.75
HMGN1-202ENST00000380747 SNURFQ9Y675 71 aa4.14□□□□□ -1.75
HMGN1-202ENST00000380747 H0YAA0 97 aa4.13□□□□□ -1.75
HMGN1-202ENST00000380747 CRIPTQ9P021 101 aa4.13□□□□□ -1.75
HMGN1-202ENST00000380747 Q5VV11 94 aa4.12□□□□□ -1.75
HMGN1-202ENST00000380747 ACYP2P14621 99 aa4.11□□□□□ -1.75
HMGN1-202ENST00000380747 C20orf197Q8N268 126 aa4.11□□□□□ -1.75
HMGN1-202ENST00000380747 SERP2Q8N6R1 65 aa4.11□□□□□ -1.75
HMGN1-202ENST00000380747 KRTAP19-8Q3LI54 63 aa4.1□□□□□ -1.75
HMGN1-202ENST00000380747 KMT2DO14686 5537 aa4.1□□□□□ -1.75
HMGN1-202ENST00000380747 MT1BP07438 61 aa4.09□□□□□ -1.75
HMGN1-202ENST00000380747 CHKB-CPT1BH3BT56 60 aa4.07□□□□□ -1.76
HMGN1-202ENST00000380747 SPTSSBQ8NFR3 76 aa4.05□□□□□ -1.76
HMGN1-202ENST00000380747 P0C880 135 aa4.04□□□□□ -1.76
HMGN1-202ENST00000380747 SPANXA2-OT1Q8N9U9 137 aa4.04□□□□□ -1.76
HMGN1-202ENST00000380747 A6NN06 94 aa4.03□□□□□ -1.76
HMGN1-202ENST00000380747 KRTAP5-9P26371 169 aa4.03□□□□□ -1.76
HMGN1-202ENST00000380747 COX7CP15954 63 aa4.02□□□□□ -1.77
HMGN1-202ENST00000380747 R4GN34 69 aa4.02□□□□□ -1.77
HMGN1-202ENST00000380747 M0QZ58 72 aa4□□□□□ -1.77
HMGN1-202ENST00000380747 KRTAP10-5P60370 271 aa3.98□□□□□ -1.77
HMGN1-202ENST00000380747 KRTAP2-3P0C7H8 128 aa3.96□□□□□ -1.78
HMGN1-202ENST00000380747 KRTAP2-4Q9BYR9 128 aa3.96□□□□□ -1.78
HMGN1-202ENST00000380747 LINC01554Q52M75 96 aa3.95□□□□□ -1.78
HMGN1-202ENST00000380747 COA5Q86WW8 74 aa3.95□□□□□ -1.78
HMGN1-202ENST00000380747 PLAC4Q8WY50 150 aa3.95□□□□□ -1.78
HMGN1-202ENST00000380747 ANAPC13Q9BS18 74 aa3.95□□□□□ -1.78
HMGN1-202ENST00000380747 CYSTM1Q9H1C7 97 aa3.93□□□□□ -1.78
HMGN1-202ENST00000380747 H7BZZ5 65 aa3.92□□□□□ -1.78
HMGN1-202ENST00000380747 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
HMGN1-202ENST00000380747 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.9□□□□□ -1.79
HMGN1-202ENST00000380747 PRO2289Q9P1D8 64 aa3.89□□□□□ -1.79
HMGN1-202ENST00000380747 CCDC179H3BU77 68 aa3.86□□□□□ -1.79
HMGN1-202ENST00000380747 MT1XP80297 61 aa3.86□□□□□ -1.79
HMGN1-202ENST00000380747 SEC61GP60059 68 aa3.85□□□□□ -1.79
HMGN1-202ENST00000380747 SERP1Q9Y6X1 66 aa3.84□□□□□ -1.79
HMGN1-202ENST00000380747 KRTAP13-4Q3LI77 160 aa3.82□□□□□ -1.8
HMGN1-202ENST00000380747 KRTAP2-1Q9BYU5 128 aa3.82□□□□□ -1.8
HMGN1-202ENST00000380747 SPRR2EP22531 72 aa3.79□□□□□ -1.8
HMGN1-202ENST00000380747 SPRR2BP35325 72 aa3.79□□□□□ -1.8
HMGN1-202ENST00000380747 SPRR2AP35326 72 aa3.79□□□□□ -1.8
HMGN1-202ENST00000380747 KRTAP10-12P60413 245 aa3.78□□□□□ -1.8
HMGN1-202ENST00000380747 SPRR2FQ96RM1 72 aa3.78□□□□□ -1.8
HMGN1-202ENST00000380747 GPR98Q8WXG9 6306 aa3.77□□□□□ -1.81
HMGN1-202ENST00000380747 A0A1B0GU33 70 aa3.76□□□□□ -1.81
HMGN1-202ENST00000380747 A0A1B0GU69 56 aa3.76□□□□□ -1.81
HMGN1-202ENST00000380747 ATP5EP56381 51 aaPredicted RBP3.76□□□□□ -1.81
HMGN1-202ENST00000380747 A0A0D9SG42 100 aa3.75□□□□□ -1.81
HMGN1-202ENST00000380747 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
HMGN1-202ENST00000380747 KRTAP12-2P59991 146 aa3.74□□□□□ -1.81
HMGN1-202ENST00000380747 SPATA8Q6RVD6 105 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms