RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 LRP2P98164 4655 aa12.78□□□□□ -0.36
NDEL1-202ENST00000380025 PMAIP1Q13794 54 aa12.76□□□□□ -0.37
NDEL1-202ENST00000380025 SPATA8Q6RVD6 105 aa12.76□□□□□ -0.37
NDEL1-202ENST00000380025 LPAP08519 4548 aa12.74□□□□□ -0.37
NDEL1-202ENST00000380025 MIR22HGQ0VDD5 57 aa12.71□□□□□ -0.37
NDEL1-202ENST00000380025 KRTAP3-3Q9BYR6 98 aa12.67□□□□□ -0.38
NDEL1-202ENST00000380025 A6NN06 94 aa12.64□□□□□ -0.39
NDEL1-202ENST00000380025 HERC2O95714 4834 aa12.63□□□□□ -0.39
NDEL1-202ENST00000380025 J3QL48 77 aa12.61□□□□□ -0.39
NDEL1-202ENST00000380025 S4R3F8 94 aa12.6□□□□□ -0.39
NDEL1-202ENST00000380025 BIRC6Q9NR09 4857 aa12.59□□□□□ -0.39
NDEL1-202ENST00000380025 H1FX-AS1Q4G0G2 97 aa12.54□□□□□ -0.4
NDEL1-202ENST00000380025 A0A1B0GU33 70 aa12.53□□□□□ -0.4
NDEL1-202ENST00000380025 H0YAA0 97 aa12.5□□□□□ -0.41
NDEL1-202ENST00000380025 RBM12B-AS1Q9P1G2 102 aa12.46□□□□□ -0.41
NDEL1-202ENST00000380025 SEC61BP60468 96 aaKnown RBP12.42□□□□□ -0.42
NDEL1-202ENST00000380025 KTN1-AS1Q86SY8 53 aa12.4□□□□□ -0.42
NDEL1-202ENST00000380025 KRTAP10-6P60371 365 aaPredicted RBP12.39□□□□□ -0.43
NDEL1-202ENST00000380025 KRTAP3-2Q9BYR7 98 aa12.36□□□□□ -0.43
NDEL1-202ENST00000380025 MUC17Q685J3 4493 aa12.3□□□□□ -0.44
NDEL1-202ENST00000380025 KRTAP4-1Q9BYQ7 146 aa12.27□□□□□ -0.45
NDEL1-202ENST00000380025 CSAG1Q6PB30 78 aa12.22□□□□□ -0.45
NDEL1-202ENST00000380025 P0C880 135 aa12.21□□□□□ -0.45
NDEL1-202ENST00000380025 KRTAP13-4Q3LI77 160 aa12.18□□□□□ -0.46
NDEL1-202ENST00000380025 ADM2Q7Z4H4 148 aa12.15□□□□□ -0.46
NDEL1-202ENST00000380025 PCLOQ9Y6V0 5065 aa12.08□□□□□ -0.48
NDEL1-202ENST00000380025 KRTAP19-2Q3LHN2 52 aa12.03□□□□□ -0.48
NDEL1-202ENST00000380025 HERC1Q15751 4861 aa12□□□□□ -0.49
NDEL1-202ENST00000380025 A0A0D9SG42 100 aa11.98□□□□□ -0.49
NDEL1-202ENST00000380025 PRAC1Q96KF2 57 aa11.98□□□□□ -0.49
NDEL1-202ENST00000380025 K7ERS5 55 aa11.95□□□□□ -0.5
NDEL1-202ENST00000380025 HMCN2Q8NDA2 5059 aa11.93□□□□□ -0.5
NDEL1-202ENST00000380025 MUC2Q02817 5179 aa11.84□□□□□ -0.51
NDEL1-202ENST00000380025 M0QZ58 72 aa11.83□□□□□ -0.52
NDEL1-202ENST00000380025 KRTAP12-2P59991 146 aa11.72□□□□□ -0.53
NDEL1-202ENST00000380025 KRTAP12-1P59990 96 aa11.69□□□□□ -0.54
NDEL1-202ENST00000380025 FLGP20930 4061 aaPredicted RBP11.68□□□□□ -0.54
NDEL1-202ENST00000380025 R4GN34 69 aa11.64□□□□□ -0.55
NDEL1-202ENST00000380025 LORP23490 312 aaPredicted RBP11.64□□□□□ -0.55
NDEL1-202ENST00000380025 ROMO1P60602 79 aa11.62□□□□□ -0.55
NDEL1-202ENST00000380025 SPINT4Q6UDR6 99 aa11.62□□□□□ -0.55
NDEL1-202ENST00000380025 LINC01554Q52M75 96 aa11.52□□□□□ -0.56
NDEL1-202ENST00000380025 LCE2CQ5TA81 110 aa11.5□□□□□ -0.57
NDEL1-202ENST00000380025 KRTAP25-1Q3LHN0 102 aa11.48□□□□□ -0.57
NDEL1-202ENST00000380025 CRIPTQ9P021 101 aa11.44□□□□□ -0.58
NDEL1-202ENST00000380025 UBR4Q5T4S7 5183 aa11.35□□□□□ -0.59
NDEL1-202ENST00000380025 RNF213Q63HN8 5207 aa11.33□□□□□ -0.6
NDEL1-202ENST00000380025 FAT4Q6V0I7 4981 aa11.33□□□□□ -0.6
NDEL1-202ENST00000380025 MT1HP80294 61 aa11.21□□□□□ -0.62
NDEL1-202ENST00000380025 C10orf95Q9H7T3 257 aa11.16□□□□□ -0.62
NDEL1-202ENST00000380025 M0R2T5 61 aa11.12□□□□□ -0.63
NDEL1-202ENST00000380025 CAMK2N1Q7Z7J9 78 aa10.97□□□□□ -0.65
NDEL1-202ENST00000380025 SPRR2GQ9BYE4 73 aa10.94□□□□□ -0.66
NDEL1-202ENST00000380025 KRTAP19-1Q8IUB9 90 aa10.91□□□□□ -0.66
NDEL1-202ENST00000380025 MT2AP02795 61 aa10.9□□□□□ -0.66
NDEL1-202ENST00000380025 KRTAP9-8Q9BYQ0 159 aa10.89□□□□□ -0.67
NDEL1-202ENST00000380025 MT1FP04733 61 aa10.88□□□□□ -0.67
NDEL1-202ENST00000380025 KRTAP10-10P60014 251 aa10.82□□□□□ -0.68
NDEL1-202ENST00000380025 PLAC4Q8WY50 150 aa10.67□□□□□ -0.7
NDEL1-202ENST00000380025 KRTAP19-8Q3LI54 63 aa10.55□□□□□ -0.72
NDEL1-202ENST00000380025 TNP1P09430 55 aa10.52□□□□□ -0.73
NDEL1-202ENST00000380025 PP632Q6XCG6 107 aa10.49□□□□□ -0.73
NDEL1-202ENST00000380025 KRTAP9-3Q9BYQ3 159 aa10.46□□□□□ -0.74
NDEL1-202ENST00000380025 MT1BP07438 61 aa10.42□□□□□ -0.74
NDEL1-202ENST00000380025 KRTAP15-1Q3LI76 137 aa10.35□□□□□ -0.75
NDEL1-202ENST00000380025 LCE2AQ5TA79 106 aaPredicted RBP10.33□□□□□ -0.76
NDEL1-202ENST00000380025 KRTAP23-1A1A580 65 aa10.32□□□□□ -0.76
NDEL1-202ENST00000380025 KRTAP10-5P60370 271 aa10.22□□□□□ -0.77
NDEL1-202ENST00000380025 MT1XP80297 61 aa10.22□□□□□ -0.77
NDEL1-202ENST00000380025 LCE2BO14633 110 aa10.11□□□□□ -0.79
NDEL1-202ENST00000380025 LCE3AQ5TA76 89 aa10.05□□□□□ -0.8
NDEL1-202ENST00000380025 PRO2289Q9P1D8 64 aa9.92□□□□□ -0.82
NDEL1-202ENST00000380025 KRTAP10-7P60409 375 aaPredicted RBP9.87□□□□□ -0.83
NDEL1-202ENST00000380025 KRTAP10-12P60413 245 aa9.85□□□□□ -0.83
NDEL1-202ENST00000380025 KRTAP8-1Q8IUC2 63 aa9.82□□□□□ -0.84
NDEL1-202ENST00000380025 NDUFAF8A1L188 74 aa9.82□□□□□ -0.84
NDEL1-202ENST00000380025 USH2AO75445 5202 aa9.78□□□□□ -0.84
NDEL1-202ENST00000380025 H3BS24 57 aa9.75□□□□□ -0.85
NDEL1-202ENST00000380025 SPRR5A0A1B0GTR4 108 aa9.62□□□□□ -0.87
NDEL1-202ENST00000380025 KRTAP12-3P60328 96 aa9.6□□□□□ -0.87
NDEL1-202ENST00000380025 LUZP6Q538Z0 58 aa9.51□□□□□ -0.89
NDEL1-202ENST00000380025 SSPOA2VEC9 5147 aa9.38□□□□□ -0.91
NDEL1-202ENST00000380025 KRTAP19-5Q3LI72 72 aa9.37□□□□□ -0.91
NDEL1-202ENST00000380025 KRTAP4-8A0A0G2JLE6 195 aa9.36□□□□□ -0.91
NDEL1-202ENST00000380025 KRTAP4-8Q9BYQ9 185 aa9.36□□□□□ -0.91
NDEL1-202ENST00000380025 KMT2DO14686 5537 aa9.35□□□□□ -0.91
NDEL1-202ENST00000380025 KRTAP19-6Q3LI70 58 aa9.26□□□□□ -0.93
NDEL1-202ENST00000380025 KRTAP19-7Q3SYF9 63 aa9.12□□□□□ -0.95
NDEL1-202ENST00000380025 LCE2DQ5TA82 110 aaPredicted RBP9.09□□□□□ -0.95
NDEL1-202ENST00000380025 FSIP2Q5CZC0 6907 aa9.07□□□□□ -0.96
NDEL1-202ENST00000380025 LCE3CQ5T5A8 94 aa9.01□□□□□ -0.97
NDEL1-202ENST00000380025 MT1EP04732 61 aa8.9□□□□□ -0.98
NDEL1-202ENST00000380025 MT1LQ93083 61 aa8.81□□□□□ -1
NDEL1-202ENST00000380025 FCGBPQ9Y6R7 5405 aaPredicted RBP8.8□□□□□ -1
NDEL1-202ENST00000380025 KRTAP19-4Q3LI73 84 aa8.73□□□□□ -1.01
NDEL1-202ENST00000380025 KRTAP4-7Q9BYR0 210 aa8.72□□□□□ -1.01
NDEL1-202ENST00000380025 A0A0A0MQY5 61 aa8.67□□□□□ -1.02
NDEL1-202ENST00000380025 KRTAP9-6A8MVA2 160 aa8.64□□□□□ -1.03
NDEL1-202ENST00000380025 KRTAP9-2Q9BYQ4 174 aa8.47□□□□□ -1.05
NDEL1-202ENST00000380025 MUC12Q9UKN1 5478 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms