RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 BRK1Q8WUW1 75 aa5.7□□□□□ -1.5
POLR2J3-201ENST00000379340 PRR15LQ9BU68 103 aa5.7□□□□□ -1.5
POLR2J3-201ENST00000379340 Q75L30 129 aa5.68□□□□□ -1.5
POLR2J3-201ENST00000379340 SEC61GP60059 68 aa5.65□□□□□ -1.5
POLR2J3-201ENST00000379340 KRTAP9-2Q9BYQ4 174 aa5.65□□□□□ -1.5
POLR2J3-201ENST00000379340 TNXBP22105 4242 aa5.64□□□□□ -1.51
POLR2J3-201ENST00000379340 SPINK7P58062 85 aa5.59□□□□□ -1.52
POLR2J3-201ENST00000379340 A6NED7 52 aa5.58□□□□□ -1.52
POLR2J3-201ENST00000379340 ATP11AUNQ6ZP68 121 aa5.58□□□□□ -1.52
POLR2J3-201ENST00000379340 SPTSSBQ8NFR3 76 aa5.58□□□□□ -1.52
POLR2J3-201ENST00000379340 KRTAP9-6A0A140TA67 174 aa5.57□□□□□ -1.52
POLR2J3-201ENST00000379340 RPL37P61927 97 aaKnown RBP5.57□□□□□ -1.52
POLR2J3-201ENST00000379340 A0A1B0GU69 56 aa5.55□□□□□ -1.52
POLR2J3-201ENST00000379340 H3BS24 57 aa5.55□□□□□ -1.52
POLR2J3-201ENST00000379340 CDC42SE1Q9NRR8 79 aa5.54□□□□□ -1.52
POLR2J3-201ENST00000379340 XP32Q5T750 250 aa5.53□□□□□ -1.52
POLR2J3-201ENST00000379340 COX6B2Q6YFQ2 88 aa5.52□□□□□ -1.53
POLR2J3-201ENST00000379340 LPAP08519 4548 aa5.52□□□□□ -1.53
POLR2J3-201ENST00000379340 FAT4Q6V0I7 4981 aa5.5□□□□□ -1.53
POLR2J3-201ENST00000379340 LCA10Q71F78 164 aa5.5□□□□□ -1.53
POLR2J3-201ENST00000379340 KRTAP3-1Q9BYR8 98 aa5.49□□□□□ -1.53
POLR2J3-201ENST00000379340 PMAIP1Q13794 54 aa5.48□□□□□ -1.53
POLR2J3-201ENST00000379340 MUC2Q02817 5179 aa5.47□□□□□ -1.53
POLR2J3-201ENST00000379340 TPRXLQ17RH7 258 aa5.46□□□□□ -1.53
POLR2J3-201ENST00000379340 UQCR11O14957 56 aa5.44□□□□□ -1.54
POLR2J3-201ENST00000379340 A8MU10 97 aa5.43□□□□□ -1.54
POLR2J3-201ENST00000379340 A0A0A0MQY5 61 aa5.42□□□□□ -1.54
POLR2J3-201ENST00000379340 SPATA8Q6RVD6 105 aa5.42□□□□□ -1.54
POLR2J3-201ENST00000379340 MIR22HGQ0VDD5 57 aa5.38□□□□□ -1.55
POLR2J3-201ENST00000379340 A6NN06 94 aa5.33□□□□□ -1.56
POLR2J3-201ENST00000379340 S4R3F8 94 aa5.33□□□□□ -1.56
POLR2J3-201ENST00000379340 KTN1-AS1Q86SY8 53 aa5.31□□□□□ -1.56
POLR2J3-201ENST00000379340 FSIP2Q5CZC0 6907 aa5.3□□□□□ -1.56
POLR2J3-201ENST00000379340 H1FX-AS1Q4G0G2 97 aa5.3□□□□□ -1.56
POLR2J3-201ENST00000379340 RBM12B-AS1Q9P1G2 102 aa5.3□□□□□ -1.56
POLR2J3-201ENST00000379340 A0A1B0GU33 70 aa5.29□□□□□ -1.56
POLR2J3-201ENST00000379340 SEC61BP60468 96 aaKnown RBP5.28□□□□□ -1.56
POLR2J3-201ENST00000379340 CRCT1Q9UGL9 99 aa5.25□□□□□ -1.57
POLR2J3-201ENST00000379340 H0YAA0 97 aa5.24□□□□□ -1.57
POLR2J3-201ENST00000379340 KRTAP10-6P60371 365 aaPredicted RBP5.18□□□□□ -1.58
POLR2J3-201ENST00000379340 CSAG1Q6PB30 78 aa5.18□□□□□ -1.58
POLR2J3-201ENST00000379340 K7ERS5 55 aa5.14□□□□□ -1.59
POLR2J3-201ENST00000379340 MUC17Q685J3 4493 aa5.13□□□□□ -1.59
POLR2J3-201ENST00000379340 KRTAP4-8Q9BYQ9 185 aa5.12□□□□□ -1.59
POLR2J3-201ENST00000379340 ADM2Q7Z4H4 148 aa5.1□□□□□ -1.59
POLR2J3-201ENST00000379340 P0C880 135 aa5.08□□□□□ -1.6
POLR2J3-201ENST00000379340 KRTAP13-4Q3LI77 160 aa5.06□□□□□ -1.6
POLR2J3-201ENST00000379340 KRTAP4-1Q9BYQ7 146 aa5.06□□□□□ -1.6
POLR2J3-201ENST00000379340 M0QZ58 72 aa5.04□□□□□ -1.6
POLR2J3-201ENST00000379340 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.01□□□□□ -1.61
POLR2J3-201ENST00000379340 A0A0D9SG42 100 aa4.99□□□□□ -1.61
POLR2J3-201ENST00000379340 KRTAP19-2Q3LHN2 52 aa4.99□□□□□ -1.61
POLR2J3-201ENST00000379340 PRAC1Q96KF2 57 aa4.99□□□□□ -1.61
POLR2J3-201ENST00000379340 KRTAP9-7A8MTY7 169 aa4.97□□□□□ -1.61
POLR2J3-201ENST00000379340 LINC01554Q52M75 96 aa4.95□□□□□ -1.62
POLR2J3-201ENST00000379340 ROMO1P60602 79 aa4.94□□□□□ -1.62
POLR2J3-201ENST00000379340 R4GN34 69 aa4.91□□□□□ -1.62
POLR2J3-201ENST00000379340 KRTAP12-1P59990 96 aa4.91□□□□□ -1.62
POLR2J3-201ENST00000379340 MT1HP80294 61 aa4.9□□□□□ -1.63
POLR2J3-201ENST00000379340 KRTAP12-2P59991 146 aa4.89□□□□□ -1.63
POLR2J3-201ENST00000379340 SPINT4Q6UDR6 99 aa4.88□□□□□ -1.63
POLR2J3-201ENST00000379340 KRTAP25-1Q3LHN0 102 aa4.87□□□□□ -1.63
POLR2J3-201ENST00000379340 LCE3BQ5TA77 95 aa4.84□□□□□ -1.63
POLR2J3-201ENST00000379340 KRTAP4-8A0A0G2JLE6 195 aa4.83□□□□□ -1.64
POLR2J3-201ENST00000379340 FLGP20930 4061 aaPredicted RBP4.83□□□□□ -1.64
POLR2J3-201ENST00000379340 CRIPTQ9P021 101 aa4.82□□□□□ -1.64
POLR2J3-201ENST00000379340 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
POLR2J3-201ENST00000379340 SSPOA2VEC9 5147 aa4.79□□□□□ -1.64
POLR2J3-201ENST00000379340 KRTAP9-9Q9BYP9 154 aa4.74□□□□□ -1.65
POLR2J3-201ENST00000379340 KRTAP9-4Q9BYQ2 154 aa4.74□□□□□ -1.65
POLR2J3-201ENST00000379340 USH2AO75445 5202 aa4.73□□□□□ -1.65
POLR2J3-201ENST00000379340 M0R2T5 61 aa4.71□□□□□ -1.66
POLR2J3-201ENST00000379340 KRTAP4-7Q9BYR0 210 aa4.71□□□□□ -1.66
POLR2J3-201ENST00000379340 FCGBPQ9Y6R7 5405 aaPredicted RBP4.71□□□□□ -1.66
POLR2J3-201ENST00000379340 SYNE2Q8WXH0 6885 aaKnown RBP4.69□□□□□ -1.66
POLR2J3-201ENST00000379340 CAMK2N1Q7Z7J9 78 aa4.64□□□□□ -1.67
POLR2J3-201ENST00000379340 C10orf95Q9H7T3 257 aa4.63□□□□□ -1.67
POLR2J3-201ENST00000379340 KRTAP4-12Q9BQ66 201 aa4.62□□□□□ -1.67
POLR2J3-201ENST00000379340 MACF1Q9UPN3 7388 aaKnown RBP4.62□□□□□ -1.67
POLR2J3-201ENST00000379340 KRTAP19-1Q8IUB9 90 aa4.61□□□□□ -1.67
POLR2J3-201ENST00000379340 SPRR2GQ9BYE4 73 aa4.61□□□□□ -1.67
POLR2J3-201ENST00000379340 KRTAP9-8Q9BYQ0 159 aa4.58□□□□□ -1.68
POLR2J3-201ENST00000379340 MT2AP02795 61 aa4.55□□□□□ -1.68
POLR2J3-201ENST00000379340 PLAC4Q8WY50 150 aa4.53□□□□□ -1.68
POLR2J3-201ENST00000379340 KRTAP10-10P60014 251 aa4.53□□□□□ -1.69
POLR2J3-201ENST00000379340 LCE1DQ5T752 114 aa4.53□□□□□ -1.69
POLR2J3-201ENST00000379340 MT1FP04733 61 aa4.52□□□□□ -1.69
POLR2J3-201ENST00000379340 PP632Q6XCG6 107 aa4.52□□□□□ -1.69
POLR2J3-201ENST00000379340 KRTAP4-2Q9BYR5 136 aa4.5□□□□□ -1.69
POLR2J3-201ENST00000379340 TNP1P09430 55 aa4.48□□□□□ -1.69
POLR2J3-201ENST00000379340 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
POLR2J3-201ENST00000379340 KRTAP4-9Q9BYQ8 210 aa4.47□□□□□ -1.69
POLR2J3-201ENST00000379340 KRTAP19-8Q3LI54 63 aa4.46□□□□□ -1.7
POLR2J3-201ENST00000379340 KRTAP9-3Q9BYQ3 159 aa4.45□□□□□ -1.7
POLR2J3-201ENST00000379340 NEBP20929 6669 aa4.44□□□□□ -1.7
POLR2J3-201ENST00000379340 KRTAP6-3Q3LI67 103 aa4.44□□□□□ -1.7
POLR2J3-201ENST00000379340 KRTAP19-4Q3LI73 84 aa4.43□□□□□ -1.7
POLR2J3-201ENST00000379340 KRTAP19-6Q3LI70 58 aa4.4□□□□□ -1.71
POLR2J3-201ENST00000379340 KRTAP15-1Q3LI76 137 aa4.36□□□□□ -1.71
POLR2J3-201ENST00000379340 MT1BP07438 61 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms