RNA–Protein interactions for RNA: ENST00000377526.3

AUP1-201, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AUP1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-201ENST00000377526 H7BZZ5 65 aa9.39□□□□□ -0.91
AUP1-201ENST00000377526 TMEM258P61165 79 aa9.38□□□□□ -0.91
AUP1-201ENST00000377526 NDUFC1O43677 76 aa9.37□□□□□ -0.91
AUP1-201ENST00000377526 KRTAP3-3Q9BYR6 98 aa9.37□□□□□ -0.91
AUP1-201ENST00000377526 ACYP2P14621 99 aa9.3□□□□□ -0.92
AUP1-201ENST00000377526 KRTAP9-8Q9BYQ0 159 aa9.3□□□□□ -0.92
AUP1-201ENST00000377526 CSAG1Q6PB30 78 aa9.28□□□□□ -0.92
AUP1-201ENST00000377526 MT2AP02795 61 aa9.23□□□□□ -0.93
AUP1-201ENST00000377526 RPS28P62857 69 aaKnown RBP9.21□□□□□ -0.93
AUP1-201ENST00000377526 MT1FP04733 61 aa9.17□□□□□ -0.94
AUP1-201ENST00000377526 CHKB-CPT1BH3BT56 60 aa9.13□□□□□ -0.95
AUP1-201ENST00000377526 ATP5EP56381 51 aaPredicted RBP9.13□□□□□ -0.95
AUP1-201ENST00000377526 COA5Q86WW8 74 aa9.12□□□□□ -0.95
AUP1-201ENST00000377526 KRTAP10-10P60014 251 aa9.1□□□□□ -0.95
AUP1-201ENST00000377526 SERP1Q9Y6X1 66 aa9.08□□□□□ -0.96
AUP1-201ENST00000377526 SPTSSBQ8NFR3 76 aa9.04□□□□□ -0.96
AUP1-201ENST00000377526 H0YAA0 97 aa9.02□□□□□ -0.97
AUP1-201ENST00000377526 KRTAP9-3Q9BYQ3 159 aa8.99□□□□□ -0.97
AUP1-201ENST00000377526 LCE2DQ5TA82 110 aaPredicted RBP8.97□□□□□ -0.97
AUP1-201ENST00000377526 ADM2Q7Z4H4 148 aa8.97□□□□□ -0.97
AUP1-201ENST00000377526 KRTAP9-2Q9BYQ4 174 aa8.91□□□□□ -0.98
AUP1-201ENST00000377526 KRTAP3-2Q9BYR7 98 aa8.91□□□□□ -0.98
AUP1-201ENST00000377526 SMIM26A0A096LP01 95 aa8.89□□□□□ -0.99
AUP1-201ENST00000377526 P0C880 135 aa8.88□□□□□ -0.99
AUP1-201ENST00000377526 LCE2BO14633 110 aa8.83□□□□□ -1
AUP1-201ENST00000377526 KRTAP19-1Q8IUB9 90 aa8.82□□□□□ -1
AUP1-201ENST00000377526 CRIPTQ9P021 101 aa8.79□□□□□ -1
AUP1-201ENST00000377526 USH2AO75445 5202 aa8.78□□□□□ -1
AUP1-201ENST00000377526 SPRR2GQ9BYE4 73 aa8.78□□□□□ -1
AUP1-201ENST00000377526 R4GN34 69 aa8.68□□□□□ -1.02
AUP1-201ENST00000377526 FSIP2Q5CZC0 6907 aa8.67□□□□□ -1.02
AUP1-201ENST00000377526 SEC61GP60059 68 aa8.67□□□□□ -1.02
AUP1-201ENST00000377526 M0QZ58 72 aa8.65□□□□□ -1.02
AUP1-201ENST00000377526 KRTAP19-8Q3LI54 63 aa8.63□□□□□ -1.03
AUP1-201ENST00000377526 Q1T7F1 81 aa8.62□□□□□ -1.03
AUP1-201ENST00000377526 SVIPQ8NHG7 77 aa8.62□□□□□ -1.03
AUP1-201ENST00000377526 A0A1B0GU69 56 aa8.62□□□□□ -1.03
AUP1-201ENST00000377526 LINC01558Q9Y6Z2 57 aa8.6□□□□□ -1.03
AUP1-201ENST00000377526 SSPOA2VEC9 5147 aa8.59□□□□□ -1.03
AUP1-201ENST00000377526 MT1BP07438 61 aa8.57□□□□□ -1.04
AUP1-201ENST00000377526 KRTAP13-4Q3LI77 160 aa8.56□□□□□ -1.04
AUP1-201ENST00000377526 Q5VV11 94 aa8.56□□□□□ -1.04
AUP1-201ENST00000377526 V9GYY9 64 aa8.55□□□□□ -1.04
AUP1-201ENST00000377526 A0A1B0GU33 70 aa8.51□□□□□ -1.05
AUP1-201ENST00000377526 LINC01554Q52M75 96 aa8.5□□□□□ -1.05
AUP1-201ENST00000377526 CRCT1Q9UGL9 99 aa8.5□□□□□ -1.05
AUP1-201ENST00000377526 PRR15LQ9BU68 103 aa8.49□□□□□ -1.05
AUP1-201ENST00000377526 PSPHP1O15172 72 aa8.44□□□□□ -1.06
AUP1-201ENST00000377526 SPATA8Q6RVD6 105 aa8.44□□□□□ -1.06
AUP1-201ENST00000377526 PRO0628Q9UI54 55 aa8.4□□□□□ -1.06
AUP1-201ENST00000377526 KRTAP9-6A0A140TA67 174 aa8.4□□□□□ -1.07
AUP1-201ENST00000377526 BRK1Q8WUW1 75 aa8.39□□□□□ -1.07
AUP1-201ENST00000377526 KRTAP19-6Q3LI70 58 aa8.38□□□□□ -1.07
AUP1-201ENST00000377526 PLAC4Q8WY50 150 aa8.34□□□□□ -1.08
AUP1-201ENST00000377526 A0A0D9SG42 100 aa8.33□□□□□ -1.08
AUP1-201ENST00000377526 A6NN06 94 aa8.31□□□□□ -1.08
AUP1-201ENST00000377526 FCGBPQ9Y6R7 5405 aaPredicted RBP8.28□□□□□ -1.08
AUP1-201ENST00000377526 A8MU10 97 aa8.26□□□□□ -1.09
AUP1-201ENST00000377526 UQCR11O14957 56 aa8.25□□□□□ -1.09
AUP1-201ENST00000377526 KRTAP10-5P60370 271 aa8.23□□□□□ -1.09
AUP1-201ENST00000377526 A6NED7 52 aa8.18□□□□□ -1.1
AUP1-201ENST00000377526 KRTAP12-1P59990 96 aa8.18□□□□□ -1.1
AUP1-201ENST00000377526 MT1XP80297 61 aa8.18□□□□□ -1.1
AUP1-201ENST00000377526 KRTAP12-2P59991 146 aa8.14□□□□□ -1.11
AUP1-201ENST00000377526 SPINT4Q6UDR6 99 aa8.14□□□□□ -1.11
AUP1-201ENST00000377526 MIR22HGQ0VDD5 57 aa8.14□□□□□ -1.11
AUP1-201ENST00000377526 CDC42SE1Q9NRR8 79 aa8.11□□□□□ -1.11
AUP1-201ENST00000377526 PRO2289Q9P1D8 64 aa8.09□□□□□ -1.11
AUP1-201ENST00000377526 CAMK2N1Q7Z7J9 78 aa8.06□□□□□ -1.12
AUP1-201ENST00000377526 MACF1Q9UPN3 7388 aaKnown RBP7.94□□□□□ -1.14
AUP1-201ENST00000377526 PMAIP1Q13794 54 aa7.92□□□□□ -1.14
AUP1-201ENST00000377526 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.91□□□□□ -1.14
AUP1-201ENST00000377526 KRTAP10-7P60409 375 aaPredicted RBP7.83□□□□□ -1.16
AUP1-201ENST00000377526 K7ERS5 55 aa7.81□□□□□ -1.16
AUP1-201ENST00000377526 C10orf95Q9H7T3 257 aa7.78□□□□□ -1.16
AUP1-201ENST00000377526 KMT2DO14686 5537 aa7.76□□□□□ -1.17
AUP1-201ENST00000377526 KRTAP10-12P60413 245 aa7.76□□□□□ -1.17
AUP1-201ENST00000377526 KTN1-AS1Q86SY8 53 aa7.74□□□□□ -1.17
AUP1-201ENST00000377526 SYNE2Q8WXH0 6885 aaKnown RBP7.73□□□□□ -1.17
AUP1-201ENST00000377526 KRTAP4-8A0A0G2JLE6 195 aa7.66□□□□□ -1.18
AUP1-201ENST00000377526 KRTAP4-8Q9BYQ9 185 aa7.66□□□□□ -1.18
AUP1-201ENST00000377526 KRTAP9-7A8MTY7 169 aa7.62□□□□□ -1.19
AUP1-201ENST00000377526 TNP1P09430 55 aa7.58□□□□□ -1.2
AUP1-201ENST00000377526 KRTAP6-3Q3LI67 103 aa7.56□□□□□ -1.2
AUP1-201ENST00000377526 KRTAP8-1Q8IUC2 63 aa7.55□□□□□ -1.2
AUP1-201ENST00000377526 KRTAP5-9P26371 169 aa7.47□□□□□ -1.21
AUP1-201ENST00000377526 ROMO1P60602 79 aa7.44□□□□□ -1.22
AUP1-201ENST00000377526 KRTAP25-1Q3LHN0 102 aa7.44□□□□□ -1.22
AUP1-201ENST00000377526 PRAC1Q96KF2 57 aa7.41□□□□□ -1.22
AUP1-201ENST00000377526 LCE3AQ5TA76 89 aa7.41□□□□□ -1.22
AUP1-201ENST00000377526 SPRR2FQ96RM1 72 aa7.4□□□□□ -1.23
AUP1-201ENST00000377526 MUC12Q9UKN1 5478 aa7.39□□□□□ -1.23
AUP1-201ENST00000377526 KRTAP19-7Q3SYF9 63 aa7.32□□□□□ -1.24
AUP1-201ENST00000377526 MDN1Q9NU22 5596 aa7.29□□□□□ -1.24
AUP1-201ENST00000377526 KRTAP19-5Q3LI72 72 aa7.28□□□□□ -1.24
AUP1-201ENST00000377526 MT1EP04732 61 aa7.21□□□□□ -1.26
AUP1-201ENST00000377526 NEBP20929 6669 aa7.18□□□□□ -1.26
AUP1-201ENST00000377526 KRTAP23-1A1A580 65 aa7.18□□□□□ -1.26
AUP1-201ENST00000377526 SPRR2EP22531 72 aa7.15□□□□□ -1.27
AUP1-201ENST00000377526 SPRR2BP35325 72 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms