RNA–Protein interactions for RNA: ENST00000377351.8

UBA1-203, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-203ENST00000377351 A0A1B0GVY2 172 aa5.23□□□□□ -1.57
UBA1-203ENST00000377351 COX6B2Q6YFQ2 88 aa5.22□□□□□ -1.57
UBA1-203ENST00000377351 DYNC1H1Q14204 4646 aaKnown RBP5.19□□□□□ -1.58
UBA1-203ENST00000377351 CAMK2N1Q7Z7J9 78 aa5.18□□□□□ -1.58
UBA1-203ENST00000377351 RYR2Q92736 4967 aa5.15□□□□□ -1.58
UBA1-203ENST00000377351 KMT2CQ8NEZ4 4911 aaKnown RBP5.15□□□□□ -1.59
UBA1-203ENST00000377351 FAT1Q14517 4588 aa5.12□□□□□ -1.59
UBA1-203ENST00000377351 APOBP04114 4563 aaKnown RBP5.11□□□□□ -1.59
UBA1-203ENST00000377351 KRTAP10-4P60372 401 aaPredicted RBP5.11□□□□□ -1.59
UBA1-203ENST00000377351 PLAC4Q8WY50 150 aa5.1□□□□□ -1.59
UBA1-203ENST00000377351 C9orf92A6NGG3 77 aa5.07□□□□□ -1.6
UBA1-203ENST00000377351 RPS29P62273 56 aaKnown RBP5.05□□□□□ -1.6
UBA1-203ENST00000377351 S4R3F8 94 aa5.03□□□□□ -1.6
UBA1-203ENST00000377351 Q5VSD8 79 aa5.02□□□□□ -1.61
UBA1-203ENST00000377351 RYR3Q15413 4870 aa4.99□□□□□ -1.61
UBA1-203ENST00000377351 KRTAP3-1Q9BYR8 98 aa4.99□□□□□ -1.61
UBA1-203ENST00000377351 PKHD1L1Q86WI1 4243 aa4.95□□□□□ -1.62
UBA1-203ENST00000377351 HSPG2P98160 4391 aa4.95□□□□□ -1.62
UBA1-203ENST00000377351 KRTAP10-8P60410 259 aa4.93□□□□□ -1.62
UBA1-203ENST00000377351 KRTAP17-1Q9BYP8 105 aa4.93□□□□□ -1.62
UBA1-203ENST00000377351 LRP1Q07954 4544 aaKnown RBP4.93□□□□□ -1.62
UBA1-203ENST00000377351 KRTAP13-4Q3LI77 160 aa4.92□□□□□ -1.62
UBA1-203ENST00000377351 RYR1P21817 5038 aa4.9□□□□□ -1.62
UBA1-203ENST00000377351 KRTAP12-2P59991 146 aa4.89□□□□□ -1.63
UBA1-203ENST00000377351 R4GN34 69 aa4.89□□□□□ -1.63
UBA1-203ENST00000377351 KIAA1109Q2LD37 5005 aa4.89□□□□□ -1.63
UBA1-203ENST00000377351 TNXBP22105 4242 aa4.87□□□□□ -1.63
UBA1-203ENST00000377351 FAT3Q8TDW7 4589 aa4.83□□□□□ -1.64
UBA1-203ENST00000377351 MT1HL1P0DM35 61 aa4.82□□□□□ -1.64
UBA1-203ENST00000377351 KRTAP10-6P60371 365 aaPredicted RBP4.82□□□□□ -1.64
UBA1-203ENST00000377351 EPPK1P58107 5090 aaKnown RBP4.82□□□□□ -1.64
UBA1-203ENST00000377351 MYCBP2O75592 4640 aa4.81□□□□□ -1.64
UBA1-203ENST00000377351 XP32Q5T750 250 aa4.81□□□□□ -1.64
UBA1-203ENST00000377351 PRO2289Q9P1D8 64 aa4.8□□□□□ -1.64
UBA1-203ENST00000377351 KRTAP4-5Q9BYR2 181 aa4.77□□□□□ -1.65
UBA1-203ENST00000377351 KRTAP3-2Q9BYR7 98 aa4.75□□□□□ -1.65
UBA1-203ENST00000377351 KRTAP12-1P59990 96 aa4.75□□□□□ -1.65
UBA1-203ENST00000377351 KRTAP3-3Q9BYR6 98 aa4.73□□□□□ -1.65
UBA1-203ENST00000377351 KRTAP23-1A1A580 65 aa4.67□□□□□ -1.66
UBA1-203ENST00000377351 M0QZ58 72 aa4.62□□□□□ -1.67
UBA1-203ENST00000377351 ABCA13Q86UQ4 5058 aa4.6□□□□□ -1.67
UBA1-203ENST00000377351 LRP2P98164 4655 aa4.6□□□□□ -1.67
UBA1-203ENST00000377351 LPAP08519 4548 aa4.59□□□□□ -1.68
UBA1-203ENST00000377351 HERC2O95714 4834 aa4.56□□□□□ -1.68
UBA1-203ENST00000377351 BIRC6Q9NR09 4857 aa4.53□□□□□ -1.68
UBA1-203ENST00000377351 PP632Q6XCG6 107 aa4.52□□□□□ -1.69
UBA1-203ENST00000377351 INE1O15225 51 aa4.51□□□□□ -1.69
UBA1-203ENST00000377351 KRTAP4-1Q9BYQ7 146 aa4.42□□□□□ -1.7
UBA1-203ENST00000377351 MUC17Q685J3 4493 aa4.37□□□□□ -1.71
UBA1-203ENST00000377351 PCLOQ9Y6V0 5065 aa4.36□□□□□ -1.71
UBA1-203ENST00000377351 HERC1Q15751 4861 aa4.34□□□□□ -1.71
UBA1-203ENST00000377351 KRTAP19-2Q3LHN2 52 aa4.29□□□□□ -1.72
UBA1-203ENST00000377351 TNP1P09430 55 aa4.29□□□□□ -1.72
UBA1-203ENST00000377351 MUC2Q02817 5179 aa4.28□□□□□ -1.72
UBA1-203ENST00000377351 LORP23490 312 aaPredicted RBP4.27□□□□□ -1.73
UBA1-203ENST00000377351 HMCN2Q8NDA2 5059 aa4.27□□□□□ -1.73
UBA1-203ENST00000377351 FLGP20930 4061 aaPredicted RBP4.18□□□□□ -1.74
UBA1-203ENST00000377351 SPRR5A0A1B0GTR4 108 aa4.14□□□□□ -1.75
UBA1-203ENST00000377351 LCE2CQ5TA81 110 aa4.13□□□□□ -1.75
UBA1-203ENST00000377351 M0R2T5 61 aa4.11□□□□□ -1.75
UBA1-203ENST00000377351 UBR4Q5T4S7 5183 aa4.09□□□□□ -1.75
UBA1-203ENST00000377351 FAT4Q6V0I7 4981 aa4.08□□□□□ -1.76
UBA1-203ENST00000377351 RNF213Q63HN8 5207 aa4.08□□□□□ -1.76
UBA1-203ENST00000377351 MT1HP80294 61 aa4.05□□□□□ -1.76
UBA1-203ENST00000377351 KRTAP10-10P60014 251 aa3.96□□□□□ -1.78
UBA1-203ENST00000377351 MT2AP02795 61 aa3.94□□□□□ -1.78
UBA1-203ENST00000377351 MT1FP04733 61 aa3.93□□□□□ -1.78
UBA1-203ENST00000377351 SPRR2GQ9BYE4 73 aa3.92□□□□□ -1.78
UBA1-203ENST00000377351 KRTAP9-8Q9BYQ0 159 aa3.92□□□□□ -1.78
UBA1-203ENST00000377351 KRTAP19-1Q8IUB9 90 aa3.91□□□□□ -1.78
UBA1-203ENST00000377351 LCE2AQ5TA79 106 aaPredicted RBP3.88□□□□□ -1.79
UBA1-203ENST00000377351 LCE3AQ5TA76 89 aa3.83□□□□□ -1.8
UBA1-203ENST00000377351 KRTAP19-8Q3LI54 63 aa3.78□□□□□ -1.8
UBA1-203ENST00000377351 KRTAP9-3Q9BYQ3 159 aa3.77□□□□□ -1.81
UBA1-203ENST00000377351 MT1BP07438 61 aa3.74□□□□□ -1.81
UBA1-203ENST00000377351 LCE2DQ5TA82 110 aaPredicted RBP3.74□□□□□ -1.81
UBA1-203ENST00000377351 LCE2BO14633 110 aa3.72□□□□□ -1.81
UBA1-203ENST00000377351 KRTAP10-5P60370 271 aa3.67□□□□□ -1.82
UBA1-203ENST00000377351 MT1XP80297 61 aa3.67□□□□□ -1.82
UBA1-203ENST00000377351 KRTAP12-3P60328 96 aa3.65□□□□□ -1.83
UBA1-203ENST00000377351 KRTAP10-12P60413 245 aa3.62□□□□□ -1.83
UBA1-203ENST00000377351 KRTAP8-1Q8IUC2 63 aa3.6□□□□□ -1.83
UBA1-203ENST00000377351 KRTAP10-7P60409 375 aaPredicted RBP3.56□□□□□ -1.84
UBA1-203ENST00000377351 FSIP2Q5CZC0 6907 aa3.54□□□□□ -1.84
UBA1-203ENST00000377351 USH2AO75445 5202 aa3.54□□□□□ -1.84
UBA1-203ENST00000377351 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
UBA1-203ENST00000377351 KMT2DO14686 5537 aa3.42□□□□□ -1.86
UBA1-203ENST00000377351 KRTAP9-6A8MVA2 160 aa3.4□□□□□ -1.86
UBA1-203ENST00000377351 KRTAP12-4P60329 112 aa3.4□□□□□ -1.86
UBA1-203ENST00000377351 KRTAP4-8A0A0G2JLE6 195 aa3.4□□□□□ -1.87
UBA1-203ENST00000377351 KRTAP4-8Q9BYQ9 185 aa3.4□□□□□ -1.87
UBA1-203ENST00000377351 KRTAP19-5Q3LI72 72 aa3.39□□□□□ -1.87
UBA1-203ENST00000377351 LCE3CQ5T5A8 94 aa3.36□□□□□ -1.87
UBA1-203ENST00000377351 SSPOA2VEC9 5147 aa3.36□□□□□ -1.87
UBA1-203ENST00000377351 KRTAP19-6Q3LI70 58 aa3.34□□□□□ -1.88
UBA1-203ENST00000377351 KRTAP2-3P0C7H8 128 aa3.3□□□□□ -1.88
UBA1-203ENST00000377351 KRTAP2-4Q9BYR9 128 aa3.3□□□□□ -1.88
UBA1-203ENST00000377351 KRTAP2-1Q9BYU5 128 aa3.3□□□□□ -1.88
UBA1-203ENST00000377351 SYNE1Q8NF91 8797 aaKnown RBP3.28□□□□□ -1.88
UBA1-203ENST00000377351 KRTAP19-7Q3SYF9 63 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms