RNA–Protein interactions for RNA: ENST00000377012.8

GABBR1-203, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GABBR1, Length 4,104 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-203ENST00000377012 P0C880 135 aa6.3□□□□□ -1.4
GABBR1-203ENST00000377012 C10orf95Q9H7T3 257 aa6.28□□□□□ -1.4
GABBR1-203ENST00000377012 KRTAP10-8P60410 259 aa6.27□□□□□ -1.41
GABBR1-203ENST00000377012 DNAH6Q9C0G6 4158 aa6.23□□□□□ -1.41
GABBR1-203ENST00000377012 NDUFAF8A1L188 74 aa6.23□□□□□ -1.41
GABBR1-203ENST00000377012 KRTAP10-4P60372 401 aaPredicted RBP6.17□□□□□ -1.42
GABBR1-203ENST00000377012 DYNC1H1Q14204 4646 aaKnown RBP6.15□□□□□ -1.43
GABBR1-203ENST00000377012 KRTAP13-4Q3LI77 160 aa6.13□□□□□ -1.43
GABBR1-203ENST00000377012 PLAC4Q8WY50 150 aa6.12□□□□□ -1.43
GABBR1-203ENST00000377012 VPS13BQ7Z7G8 4022 aa6.11□□□□□ -1.43
GABBR1-203ENST00000377012 LUZP6Q538Z0 58 aa6.11□□□□□ -1.43
GABBR1-203ENST00000377012 MYCBP2O75592 4640 aa6.09□□□□□ -1.43
GABBR1-203ENST00000377012 KRTAP10-6P60371 365 aaPredicted RBP6.08□□□□□ -1.44
GABBR1-203ENST00000377012 TPRXLQ17RH7 258 aa6.07□□□□□ -1.44
GABBR1-203ENST00000377012 KRTAP12-2P59991 146 aa6.06□□□□□ -1.44
GABBR1-203ENST00000377012 HYDINQ4G0P3 5121 aa6.06□□□□□ -1.44
GABBR1-203ENST00000377012 KRTAP3-3Q9BYR6 98 aa6.02□□□□□ -1.45
GABBR1-203ENST00000377012 MT1HL1P0DM35 61 aa6□□□□□ -1.45
GABBR1-203ENST00000377012 PKD1P98161 4303 aa5.98□□□□□ -1.45
GABBR1-203ENST00000377012 PKHD1P08F94 4074 aa5.97□□□□□ -1.45
GABBR1-203ENST00000377012 KRTAP3-2Q9BYR7 98 aa5.97□□□□□ -1.45
GABBR1-203ENST00000377012 SACSQ9NZJ4 4579 aa5.96□□□□□ -1.46
GABBR1-203ENST00000377012 LRP1Q07954 4544 aaKnown RBP5.95□□□□□ -1.46
GABBR1-203ENST00000377012 KRTAP12-1P59990 96 aa5.95□□□□□ -1.46
GABBR1-203ENST00000377012 FAT2Q9NYQ8 4349 aa5.94□□□□□ -1.46
GABBR1-203ENST00000377012 KIAA1109Q2LD37 5005 aa5.92□□□□□ -1.46
GABBR1-203ENST00000377012 KRTAP4-5Q9BYR2 181 aa5.92□□□□□ -1.46
GABBR1-203ENST00000377012 KRTAP10-10P60014 251 aa5.91□□□□□ -1.46
GABBR1-203ENST00000377012 RYR1P21817 5038 aa5.9□□□□□ -1.47
GABBR1-203ENST00000377012 FAT3Q8TDW7 4589 aa5.89□□□□□ -1.47
GABBR1-203ENST00000377012 APOBP04114 4563 aaKnown RBP5.89□□□□□ -1.47
GABBR1-203ENST00000377012 KRTAP15-1Q3LI76 137 aa5.86□□□□□ -1.47
GABBR1-203ENST00000377012 RYR3Q15413 4870 aa5.79□□□□□ -1.48
GABBR1-203ENST00000377012 TNP1P09430 55 aa5.77□□□□□ -1.49
GABBR1-203ENST00000377012 KRTAP17-1Q9BYP8 105 aa5.75□□□□□ -1.49
GABBR1-203ENST00000377012 KMT2CQ8NEZ4 4911 aaKnown RBP5.72□□□□□ -1.49
GABBR1-203ENST00000377012 PKHD1L1Q86WI1 4243 aa5.71□□□□□ -1.5
GABBR1-203ENST00000377012 LORP23490 312 aaPredicted RBP5.69□□□□□ -1.5
GABBR1-203ENST00000377012 RYR2Q92736 4967 aa5.68□□□□□ -1.5
GABBR1-203ENST00000377012 LRP2P98164 4655 aa5.66□□□□□ -1.5
GABBR1-203ENST00000377012 PP632Q6XCG6 107 aa5.6□□□□□ -1.51
GABBR1-203ENST00000377012 HSPG2P98160 4391 aa5.6□□□□□ -1.51
GABBR1-203ENST00000377012 KRTAP4-1Q9BYQ7 146 aa5.59□□□□□ -1.52
GABBR1-203ENST00000377012 TNXBP22105 4242 aa5.5□□□□□ -1.53
GABBR1-203ENST00000377012 LPAP08519 4548 aa5.48□□□□□ -1.53
GABBR1-203ENST00000377012 PRO2289Q9P1D8 64 aa5.46□□□□□ -1.54
GABBR1-203ENST00000377012 HERC2O95714 4834 aa5.4□□□□□ -1.55
GABBR1-203ENST00000377012 EPPK1P58107 5090 aaKnown RBP5.36□□□□□ -1.55
GABBR1-203ENST00000377012 ABCA13Q86UQ4 5058 aa5.25□□□□□ -1.57
GABBR1-203ENST00000377012 MUC2Q02817 5179 aa5.17□□□□□ -1.58
GABBR1-203ENST00000377012 LCE3AQ5TA76 89 aa5.14□□□□□ -1.59
GABBR1-203ENST00000377012 PCLOQ9Y6V0 5065 aa5.12□□□□□ -1.59
GABBR1-203ENST00000377012 MT1HP80294 61 aa5.08□□□□□ -1.6
GABBR1-203ENST00000377012 KRTAP23-1A1A580 65 aa5.07□□□□□ -1.6
GABBR1-203ENST00000377012 MT2AP02795 61 aa5.04□□□□□ -1.6
GABBR1-203ENST00000377012 KRTAP10-12P60413 245 aa5.04□□□□□ -1.6
GABBR1-203ENST00000377012 MT1FP04733 61 aa5.03□□□□□ -1.6
GABBR1-203ENST00000377012 CRCT1Q9UGL9 99 aa5.03□□□□□ -1.6
GABBR1-203ENST00000377012 HERC1Q15751 4861 aa5.02□□□□□ -1.61
GABBR1-203ENST00000377012 MUC17Q685J3 4493 aa5.01□□□□□ -1.61
GABBR1-203ENST00000377012 FAT4Q6V0I7 4981 aa5.01□□□□□ -1.61
GABBR1-203ENST00000377012 BIRC6Q9NR09 4857 aa5□□□□□ -1.61
GABBR1-203ENST00000377012 SPRR2GQ9BYE4 73 aa5□□□□□ -1.61
GABBR1-203ENST00000377012 KRTAP19-2Q3LHN2 52 aa4.99□□□□□ -1.61
GABBR1-203ENST00000377012 RNF213Q63HN8 5207 aa4.98□□□□□ -1.61
GABBR1-203ENST00000377012 KRTAP12-3P60328 96 aa4.98□□□□□ -1.61
GABBR1-203ENST00000377012 KRTAP19-1Q8IUB9 90 aa4.98□□□□□ -1.61
GABBR1-203ENST00000377012 FSIP2Q5CZC0 6907 aa4.94□□□□□ -1.62
GABBR1-203ENST00000377012 LCE2CQ5TA81 110 aa4.92□□□□□ -1.62
GABBR1-203ENST00000377012 SPRR5A0A1B0GTR4 108 aa4.89□□□□□ -1.63
GABBR1-203ENST00000377012 FLGP20930 4061 aaPredicted RBP4.87□□□□□ -1.63
GABBR1-203ENST00000377012 INE1O15225 51 aa4.85□□□□□ -1.63
GABBR1-203ENST00000377012 UBR4Q5T4S7 5183 aa4.83□□□□□ -1.64
GABBR1-203ENST00000377012 KRTAP9-8Q9BYQ0 159 aa4.78□□□□□ -1.64
GABBR1-203ENST00000377012 KRTAP10-7P60409 375 aaPredicted RBP4.74□□□□□ -1.65
GABBR1-203ENST00000377012 HMCN2Q8NDA2 5059 aa4.74□□□□□ -1.65
GABBR1-203ENST00000377012 MT1BP07438 61 aa4.73□□□□□ -1.65
GABBR1-203ENST00000377012 KRTAP8-1Q8IUC2 63 aa4.72□□□□□ -1.65
GABBR1-203ENST00000377012 MT1XP80297 61 aa4.72□□□□□ -1.65
GABBR1-203ENST00000377012 KRTAP19-8Q3LI54 63 aa4.7□□□□□ -1.66
GABBR1-203ENST00000377012 KRTAP10-5P60370 271 aa4.7□□□□□ -1.66
GABBR1-203ENST00000377012 SYNE1Q8NF91 8797 aaKnown RBP4.68□□□□□ -1.66
GABBR1-203ENST00000377012 KRTAP19-5Q3LI72 72 aa4.66□□□□□ -1.66
GABBR1-203ENST00000377012 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
GABBR1-203ENST00000377012 KRTAP9-3Q9BYQ3 159 aa4.59□□□□□ -1.68
GABBR1-203ENST00000377012 KRTAP4-8A0A0G2JLE6 195 aa4.57□□□□□ -1.68
GABBR1-203ENST00000377012 KRTAP4-8Q9BYQ9 185 aa4.57□□□□□ -1.68
GABBR1-203ENST00000377012 SPRR2FQ96RM1 72 aa4.52□□□□□ -1.69
GABBR1-203ENST00000377012 LCE3CQ5T5A8 94 aa4.5□□□□□ -1.69
GABBR1-203ENST00000377012 LCE2BO14633 110 aa4.48□□□□□ -1.69
GABBR1-203ENST00000377012 USH2AO75445 5202 aa4.46□□□□□ -1.7
GABBR1-203ENST00000377012 KRTAP4-7Q9BYR0 210 aa4.39□□□□□ -1.71
GABBR1-203ENST00000377012 KMT2DO14686 5537 aa4.36□□□□□ -1.71
GABBR1-203ENST00000377012 DSTQ03001 7570 aaKnown RBP4.19□□□□□ -1.74
GABBR1-203ENST00000377012 MT1GP13640 62 aa4.19□□□□□ -1.74
GABBR1-203ENST00000377012 LCE2AQ5TA79 106 aaPredicted RBP4.17□□□□□ -1.74
GABBR1-203ENST00000377012 SPRR2EP22531 72 aa4.15□□□□□ -1.75
GABBR1-203ENST00000377012 SPRR2BP35325 72 aa4.15□□□□□ -1.75
GABBR1-203ENST00000377012 SPRR2AP35326 72 aa4.15□□□□□ -1.75
GABBR1-203ENST00000377012 MT1LQ93083 61 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 1825.1 ms