RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 KRTAP4-1Q9BYQ7 146 aa8.88□□□□□ -0.99
CTTN-203ENST00000376561 A0A1B0GU69 56 aa8.87□□□□□ -0.99
CTTN-203ENST00000376561 H1FX-AS1Q4G0G2 97 aa8.87□□□□□ -0.99
CTTN-203ENST00000376561 MUC17Q685J3 4493 aa8.86□□□□□ -0.99
CTTN-203ENST00000376561 LCA10Q71F78 164 aa8.85□□□□□ -0.99
CTTN-203ENST00000376561 HMCN2Q8NDA2 5059 aa8.85□□□□□ -0.99
CTTN-203ENST00000376561 S4R3F8 94 aa8.84□□□□□ -0.99
CTTN-203ENST00000376561 KRTAP3-3Q9BYR6 98 aa8.84□□□□□ -0.99
CTTN-203ENST00000376561 BRK1Q8WUW1 75 aa8.79□□□□□ -1
CTTN-203ENST00000376561 A6NED7 52 aa8.77□□□□□ -1.01
CTTN-203ENST00000376561 SEC61GP60059 68 aa8.77□□□□□ -1.01
CTTN-203ENST00000376561 PRO0628Q9UI54 55 aa8.76□□□□□ -1.01
CTTN-203ENST00000376561 KRTAP19-2Q3LHN2 52 aa8.66□□□□□ -1.02
CTTN-203ENST00000376561 MUC2Q02817 5179 aa8.65□□□□□ -1.02
CTTN-203ENST00000376561 A8MU10 97 aa8.65□□□□□ -1.02
CTTN-203ENST00000376561 UQCR11O14957 56 aa8.63□□□□□ -1.03
CTTN-203ENST00000376561 CSAG1Q6PB30 78 aa8.62□□□□□ -1.03
CTTN-203ENST00000376561 CDC42SE1Q9NRR8 79 aa8.62□□□□□ -1.03
CTTN-203ENST00000376561 A0A1B0GU33 70 aa8.56□□□□□ -1.04
CTTN-203ENST00000376561 KRTAP10-6P60371 365 aaPredicted RBP8.56□□□□□ -1.04
CTTN-203ENST00000376561 KRTAP3-2Q9BYR7 98 aa8.55□□□□□ -1.04
CTTN-203ENST00000376561 MIR22HGQ0VDD5 57 aa8.54□□□□□ -1.04
CTTN-203ENST00000376561 SPATA8Q6RVD6 105 aa8.54□□□□□ -1.04
CTTN-203ENST00000376561 ADM2Q7Z4H4 148 aa8.49□□□□□ -1.05
CTTN-203ENST00000376561 P0C880 135 aa8.48□□□□□ -1.05
CTTN-203ENST00000376561 H0YAA0 97 aa8.47□□□□□ -1.05
CTTN-203ENST00000376561 UBR4Q5T4S7 5183 aa8.45□□□□□ -1.06
CTTN-203ENST00000376561 FLGP20930 4061 aaPredicted RBP8.42□□□□□ -1.06
CTTN-203ENST00000376561 LCE2CQ5TA81 110 aa8.39□□□□□ -1.07
CTTN-203ENST00000376561 RNF213Q63HN8 5207 aa8.38□□□□□ -1.07
CTTN-203ENST00000376561 KRTAP13-4Q3LI77 160 aa8.35□□□□□ -1.07
CTTN-203ENST00000376561 PMAIP1Q13794 54 aa8.31□□□□□ -1.08
CTTN-203ENST00000376561 FAT4Q6V0I7 4981 aa8.28□□□□□ -1.08
CTTN-203ENST00000376561 A6NN06 94 aa8.23□□□□□ -1.09
CTTN-203ENST00000376561 M0QZ58 72 aa8.23□□□□□ -1.09
CTTN-203ENST00000376561 A0A0D9SG42 100 aa8.21□□□□□ -1.09
CTTN-203ENST00000376561 MT1HP80294 61 aa8.21□□□□□ -1.09
CTTN-203ENST00000376561 LORP23490 312 aaPredicted RBP8.18□□□□□ -1.1
CTTN-203ENST00000376561 R4GN34 69 aa8.17□□□□□ -1.1
CTTN-203ENST00000376561 M0R2T5 61 aa8.15□□□□□ -1.1
CTTN-203ENST00000376561 K7ERS5 55 aa8.11□□□□□ -1.11
CTTN-203ENST00000376561 LINC01554Q52M75 96 aa8.05□□□□□ -1.12
CTTN-203ENST00000376561 KRTAP12-1P59990 96 aa8.03□□□□□ -1.12
CTTN-203ENST00000376561 KRTAP12-2P59991 146 aa8.03□□□□□ -1.12
CTTN-203ENST00000376561 CRIPTQ9P021 101 aa8.01□□□□□ -1.13
CTTN-203ENST00000376561 SPINT4Q6UDR6 99 aa8□□□□□ -1.13
CTTN-203ENST00000376561 KTN1-AS1Q86SY8 53 aa7.99□□□□□ -1.13
CTTN-203ENST00000376561 KRTAP9-8Q9BYQ0 159 aa7.94□□□□□ -1.14
CTTN-203ENST00000376561 MT2AP02795 61 aa7.93□□□□□ -1.14
CTTN-203ENST00000376561 MT1FP04733 61 aa7.89□□□□□ -1.15
CTTN-203ENST00000376561 KRTAP10-10P60014 251 aa7.87□□□□□ -1.15
CTTN-203ENST00000376561 SPRR2GQ9BYE4 73 aa7.83□□□□□ -1.16
CTTN-203ENST00000376561 ROMO1P60602 79 aa7.82□□□□□ -1.16
CTTN-203ENST00000376561 KRTAP19-1Q8IUB9 90 aa7.82□□□□□ -1.16
CTTN-203ENST00000376561 PRAC1Q96KF2 57 aa7.78□□□□□ -1.16
CTTN-203ENST00000376561 LCE2AQ5TA79 106 aaPredicted RBP7.78□□□□□ -1.16
CTTN-203ENST00000376561 CAMK2N1Q7Z7J9 78 aa7.67□□□□□ -1.18
CTTN-203ENST00000376561 KRTAP9-3Q9BYQ3 159 aa7.64□□□□□ -1.19
CTTN-203ENST00000376561 PLAC4Q8WY50 150 aa7.6□□□□□ -1.19
CTTN-203ENST00000376561 KRTAP19-8Q3LI54 63 aa7.6□□□□□ -1.19
CTTN-203ENST00000376561 C10orf95Q9H7T3 257 aa7.6□□□□□ -1.19
CTTN-203ENST00000376561 KRTAP25-1Q3LHN0 102 aa7.55□□□□□ -1.2
CTTN-203ENST00000376561 MT1BP07438 61 aa7.5□□□□□ -1.21
CTTN-203ENST00000376561 LCE2BO14633 110 aa7.42□□□□□ -1.22
CTTN-203ENST00000376561 H3BS24 57 aa7.37□□□□□ -1.23
CTTN-203ENST00000376561 TNP1P09430 55 aa7.32□□□□□ -1.24
CTTN-203ENST00000376561 MT1XP80297 61 aa7.29□□□□□ -1.24
CTTN-203ENST00000376561 KRTAP10-5P60370 271 aa7.29□□□□□ -1.24
CTTN-203ENST00000376561 A0A0A0MQY5 61 aa7.18□□□□□ -1.26
CTTN-203ENST00000376561 PP632Q6XCG6 107 aa7.17□□□□□ -1.26
CTTN-203ENST00000376561 PRO2289Q9P1D8 64 aa7.17□□□□□ -1.26
CTTN-203ENST00000376561 USH2AO75445 5202 aa7.17□□□□□ -1.26
CTTN-203ENST00000376561 KRTAP23-1A1A580 65 aa7.12□□□□□ -1.27
CTTN-203ENST00000376561 KRTAP10-7P60409 375 aaPredicted RBP7.03□□□□□ -1.28
CTTN-203ENST00000376561 LCE3AQ5TA76 89 aa7□□□□□ -1.29
CTTN-203ENST00000376561 LCE2DQ5TA82 110 aaPredicted RBP6.99□□□□□ -1.29
CTTN-203ENST00000376561 KRTAP10-12P60413 245 aa6.96□□□□□ -1.29
CTTN-203ENST00000376561 SSPOA2VEC9 5147 aa6.91□□□□□ -1.3
CTTN-203ENST00000376561 KRTAP19-6Q3LI70 58 aa6.89□□□□□ -1.31
CTTN-203ENST00000376561 FSIP2Q5CZC0 6907 aa6.88□□□□□ -1.31
CTTN-203ENST00000376561 KRTAP8-1Q8IUC2 63 aa6.85□□□□□ -1.31
CTTN-203ENST00000376561 KRTAP4-8A0A0G2JLE6 195 aa6.72□□□□□ -1.33
CTTN-203ENST00000376561 KRTAP15-1Q3LI76 137 aa6.72□□□□□ -1.33
CTTN-203ENST00000376561 KRTAP4-8Q9BYQ9 185 aa6.72□□□□□ -1.33
CTTN-203ENST00000376561 KMT2DO14686 5537 aa6.71□□□□□ -1.33
CTTN-203ENST00000376561 KRTAP12-3P60328 96 aa6.71□□□□□ -1.34
CTTN-203ENST00000376561 KRTAP9-2Q9BYQ4 174 aa6.7□□□□□ -1.34
CTTN-203ENST00000376561 KRTAP19-5Q3LI72 72 aa6.63□□□□□ -1.35
CTTN-203ENST00000376561 FCGBPQ9Y6R7 5405 aaPredicted RBP6.58□□□□□ -1.36
CTTN-203ENST00000376561 KRTAP19-7Q3SYF9 63 aa6.51□□□□□ -1.37
CTTN-203ENST00000376561 CRCT1Q9UGL9 99 aa6.48□□□□□ -1.37
CTTN-203ENST00000376561 SPRR5A0A1B0GTR4 108 aa6.44□□□□□ -1.38
CTTN-203ENST00000376561 NDUFAF8A1L188 74 aa6.42□□□□□ -1.38
CTTN-203ENST00000376561 MT1EP04732 61 aa6.38□□□□□ -1.39
CTTN-203ENST00000376561 MACF1Q9UPN3 7388 aaKnown RBP6.34□□□□□ -1.39
CTTN-203ENST00000376561 LUZP6Q538Z0 58 aa6.28□□□□□ -1.4
CTTN-203ENST00000376561 LCE3CQ5T5A8 94 aa6.27□□□□□ -1.4
CTTN-203ENST00000376561 MT1LQ93083 61 aa6.27□□□□□ -1.4
CTTN-203ENST00000376561 KRTAP19-4Q3LI73 84 aa6.2□□□□□ -1.42
CTTN-203ENST00000376561 KRTAP9-6A0A140TA67 174 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms