RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 H3BT86 120 aa6.13□□□□□ -1.43
PTCH1-202ENST00000375271 SVIPQ8NHG7 77 aa6.11□□□□□ -1.43
PTCH1-202ENST00000375271 PRO2289Q9P1D8 64 aa6.11□□□□□ -1.43
PTCH1-202ENST00000375271 PCP4P48539 62 aa6.09□□□□□ -1.43
PTCH1-202ENST00000375271 UBL5Q9BZL1 73 aa6.07□□□□□ -1.44
PTCH1-202ENST00000375271 TP53AIP1Q9HCN2 124 aa6.06□□□□□ -1.44
PTCH1-202ENST00000375271 BATFQ16520 125 aa6.05□□□□□ -1.44
PTCH1-202ENST00000375271 KRTAP2-2Q9BYT5 123 aa6.04□□□□□ -1.44
PTCH1-202ENST00000375271 KRTAP2-1Q9BYU5 128 aa6.04□□□□□ -1.44
PTCH1-202ENST00000375271 KRTAP8-1Q8IUC2 63 aa6.03□□□□□ -1.44
PTCH1-202ENST00000375271 A8MUN3 132 aa6□□□□□ -1.45
PTCH1-202ENST00000375271 NDUFC1O43677 76 aa5.99□□□□□ -1.45
PTCH1-202ENST00000375271 PLAC4Q8WY50 150 aa5.99□□□□□ -1.45
PTCH1-202ENST00000375271 SPRR2DP22532 72 aa5.97□□□□□ -1.45
PTCH1-202ENST00000375271 A0A1W2PPM0 123 aa5.95□□□□□ -1.46
PTCH1-202ENST00000375271 C9orf118A6NHY6 69 aa5.95□□□□□ -1.46
PTCH1-202ENST00000375271 CYP4F30PQ9H0H9 118 aa5.94□□□□□ -1.46
PTCH1-202ENST00000375271 H0YAA0 97 aa5.93□□□□□ -1.46
PTCH1-202ENST00000375271 LCE1AQ5T7P2 110 aa5.93□□□□□ -1.46
PTCH1-202ENST00000375271 A0A087WVE0 104 aa5.92□□□□□ -1.46
PTCH1-202ENST00000375271 LOC101927531A0A1B0GV80 90 aa5.91□□□□□ -1.46
PTCH1-202ENST00000375271 ADM2Q7Z4H4 148 aa5.91□□□□□ -1.46
PTCH1-202ENST00000375271 COL5A1-AS1Q5SY13 56 aa5.9□□□□□ -1.46
PTCH1-202ENST00000375271 TRAV22A0A0B4J277 110 aa5.89□□□□□ -1.47
PTCH1-202ENST00000375271 MT1XP80297 61 aa5.89□□□□□ -1.47
PTCH1-202ENST00000375271 SPCS1Q9Y6A9 102 aa5.88□□□□□ -1.47
PTCH1-202ENST00000375271 K7EP34 96 aa5.87□□□□□ -1.47
PTCH1-202ENST00000375271 ACYP1P07311 99 aa5.86□□□□□ -1.47
PTCH1-202ENST00000375271 TAX1BP3O14907 124 aa5.85□□□□□ -1.47
PTCH1-202ENST00000375271 KRTAP12-2P59991 146 aa5.85□□□□□ -1.47
PTCH1-202ENST00000375271 R4GN34 69 aa5.85□□□□□ -1.47
PTCH1-202ENST00000375271 LCE3BQ5TA77 95 aa5.81□□□□□ -1.48
PTCH1-202ENST00000375271 C20orf197Q8N268 126 aa5.81□□□□□ -1.48
PTCH1-202ENST00000375271 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
PTCH1-202ENST00000375271 ATOX1O00244 68 aa5.78□□□□□ -1.48
PTCH1-202ENST00000375271 M0QZ58 72 aa5.77□□□□□ -1.49
PTCH1-202ENST00000375271 SCGB1A1P11684 91 aa5.77□□□□□ -1.49
PTCH1-202ENST00000375271 K7ERU9 68 aa5.76□□□□□ -1.49
PTCH1-202ENST00000375271 KRTAP4-8A0A0G2JLE6 195 aa5.75□□□□□ -1.49
PTCH1-202ENST00000375271 H0Y9P7 68 aa5.75□□□□□ -1.49
PTCH1-202ENST00000375271 LINC01554Q52M75 96 aa5.74□□□□□ -1.49
PTCH1-202ENST00000375271 GPR98Q8WXG9 6306 aa5.73□□□□□ -1.49
PTCH1-202ENST00000375271 UQCRQO14949 82 aa5.72□□□□□ -1.49
PTCH1-202ENST00000375271 KRTAP19-4Q3LI73 84 aa5.71□□□□□ -1.5
PTCH1-202ENST00000375271 PRO0461Q9UI25 63 aa5.68□□□□□ -1.5
PTCH1-202ENST00000375271 KRTAP4-12Q9BQ66 201 aa5.67□□□□□ -1.5
PTCH1-202ENST00000375271 HIST1H4AP62805 103 aaKnown RBP5.66□□□□□ -1.5
PTCH1-202ENST00000375271 P0C880 135 aa5.65□□□□□ -1.5
PTCH1-202ENST00000375271 GTF2H5Q6ZYL4 71 aa5.64□□□□□ -1.51
PTCH1-202ENST00000375271 KRTAP10-7P60409 375 aaPredicted RBP5.63□□□□□ -1.51
PTCH1-202ENST00000375271 LINC00208Q96KT6 92 aa5.62□□□□□ -1.51
PTCH1-202ENST00000375271 MT-ATP8P03928 68 aa5.6□□□□□ -1.51
PTCH1-202ENST00000375271 ATP5EP2Q5VTU8 51 aa5.6□□□□□ -1.51
PTCH1-202ENST00000375271 MP68P56378 58 aa5.59□□□□□ -1.51
PTCH1-202ENST00000375271 KRTAP10-12P60413 245 aa5.59□□□□□ -1.51
PTCH1-202ENST00000375271 ETDBQ3ZM63 59 aa5.59□□□□□ -1.51
PTCH1-202ENST00000375271 DSTQ03001 7570 aaKnown RBP5.59□□□□□ -1.51
PTCH1-202ENST00000375271 F8W1H4 67 aa5.57□□□□□ -1.52
PTCH1-202ENST00000375271 J3QR89 54 aa5.57□□□□□ -1.52
PTCH1-202ENST00000375271 KRTAP4-9Q9BYQ8 210 aa5.46□□□□□ -1.54
PTCH1-202ENST00000375271 DMAC1Q96GE9 116 aa5.45□□□□□ -1.54
PTCH1-202ENST00000375271 FAM240AA0A1B0GVK7 77 aa5.43□□□□□ -1.54
PTCH1-202ENST00000375271 SPTSSBQ8NFR3 76 aa5.41□□□□□ -1.54
PTCH1-202ENST00000375271 H3BPC8 53 aa5.4□□□□□ -1.54
PTCH1-202ENST00000375271 ANAPC13Q9BS18 74 aa5.39□□□□□ -1.55
PTCH1-202ENST00000375271 KRTAP9-9Q9BYP9 154 aa5.38□□□□□ -1.55
PTCH1-202ENST00000375271 KRTAP9-4Q9BYQ2 154 aa5.38□□□□□ -1.55
PTCH1-202ENST00000375271 OCR1Q9BZK8 76 aa5.38□□□□□ -1.55
PTCH1-202ENST00000375271 TRAV7A0A075B6U4 112 aa5.37□□□□□ -1.55
PTCH1-202ENST00000375271 CAMK2N1Q7Z7J9 78 aa5.37□□□□□ -1.55
PTCH1-202ENST00000375271 LINC00643Q86TS7 51 aa5.36□□□□□ -1.55
PTCH1-202ENST00000375271 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
PTCH1-202ENST00000375271 ACYP2P14621 99 aa5.32□□□□□ -1.56
PTCH1-202ENST00000375271 KRTAP19-3Q7Z4W3 81 aa5.32□□□□□ -1.56
PTCH1-202ENST00000375271 SMIM20Q8N5G0 67 aa5.31□□□□□ -1.56
PTCH1-202ENST00000375271 CHKB-CPT1BH3BT56 60 aa5.3□□□□□ -1.56
PTCH1-202ENST00000375271 LCE1DQ5T752 114 aa5.29□□□□□ -1.56
PTCH1-202ENST00000375271 LCE4AQ5TA78 99 aa5.28□□□□□ -1.56
PTCH1-202ENST00000375271 CYSTM1Q9H1C7 97 aa5.28□□□□□ -1.56
PTCH1-202ENST00000375271 MT1EP04732 61 aa5.26□□□□□ -1.57
PTCH1-202ENST00000375271 CCDC179H3BU77 68 aa5.25□□□□□ -1.57
PTCH1-202ENST00000375271 KRTAP19-7Q3SYF9 63 aa5.25□□□□□ -1.57
PTCH1-202ENST00000375271 MT4P47944 62 aa5.24□□□□□ -1.57
PTCH1-202ENST00000375271 PP632Q6XCG6 107 aa5.23□□□□□ -1.57
PTCH1-202ENST00000375271 HMCN1Q96RW7 5635 aa5.21□□□□□ -1.58
PTCH1-202ENST00000375271 RPS28P62857 69 aaKnown RBP5.2□□□□□ -1.58
PTCH1-202ENST00000375271 AHNAK2Q8IVF2 5795 aa5.17□□□□□ -1.58
PTCH1-202ENST00000375271 MT1GP13640 62 aa5.16□□□□□ -1.58
PTCH1-202ENST00000375271 KRTAP23-1A1A580 65 aa5.14□□□□□ -1.59
PTCH1-202ENST00000375271 A0A0D9SG42 100 aa5.13□□□□□ -1.59
PTCH1-202ENST00000375271 TMEM258P61165 79 aa5.1□□□□□ -1.59
PTCH1-202ENST00000375271 COX7CP15954 63 aa5.09□□□□□ -1.59
PTCH1-202ENST00000375271 KRTAP13-4Q3LI77 160 aa5.09□□□□□ -1.59
PTCH1-202ENST00000375271 KRTAP19-5Q3LI72 72 aa5.08□□□□□ -1.6
PTCH1-202ENST00000375271 KRTAP4-7Q9BYR0 210 aa5.08□□□□□ -1.6
PTCH1-202ENST00000375271 KRTAP5-10Q6L8G5 202 aa5.04□□□□□ -1.6
PTCH1-202ENST00000375271 MT1MQ8N339 61 aa5.04□□□□□ -1.6
PTCH1-202ENST00000375271 SPINT4Q6UDR6 99 aa5.03□□□□□ -1.6
PTCH1-202ENST00000375271 SEC61GP60059 68 aa5.01□□□□□ -1.61
PTCH1-202ENST00000375271 PRO0628Q9UI54 55 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms