RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 A8MUU9 505 aa9.85□□□□□ -0.83
RXRB-202ENST00000374685 C20orf166-AS1Q96NR2 134 aa9.85□□□□□ -0.83
RXRB-202ENST00000374685 KRTAP10-8P60410 259 aa9.83□□□□□ -0.84
RXRB-202ENST00000374685 ROMO1P60602 79 aa9.83□□□□□ -0.84
RXRB-202ENST00000374685 KRTAP25-1Q3LHN0 102 aa9.81□□□□□ -0.84
RXRB-202ENST00000374685 MT1HL1P0DM35 61 aa9.66□□□□□ -0.86
RXRB-202ENST00000374685 KRTAP3-1Q9BYR8 98 aa9.65□□□□□ -0.86
RXRB-202ENST00000374685 KRTAP4-5Q9BYR2 181 aa9.62□□□□□ -0.87
RXRB-202ENST00000374685 H0YAA0 97 aa9.62□□□□□ -0.87
RXRB-202ENST00000374685 XP32Q5T750 250 aa9.62□□□□□ -0.87
RXRB-202ENST00000374685 ABCA13Q86UQ4 5058 aa9.57□□□□□ -0.88
RXRB-202ENST00000374685 RPL37P61927 97 aaKnown RBP9.56□□□□□ -0.88
RXRB-202ENST00000374685 LPAP08519 4548 aa9.55□□□□□ -0.88
RXRB-202ENST00000374685 LRP2P98164 4655 aa9.55□□□□□ -0.88
RXRB-202ENST00000374685 P0C880 135 aa9.55□□□□□ -0.88
RXRB-202ENST00000374685 COX6B2Q6YFQ2 88 aa9.5□□□□□ -0.89
RXRB-202ENST00000374685 A0A1B0GU33 70 aa9.44□□□□□ -0.9
RXRB-202ENST00000374685 H1FX-AS1Q4G0G2 97 aa9.4□□□□□ -0.91
RXRB-202ENST00000374685 CRIPTQ9P021 101 aa9.37□□□□□ -0.91
RXRB-202ENST00000374685 HERC2O95714 4834 aa9.34□□□□□ -0.91
RXRB-202ENST00000374685 K7ERS5 55 aa9.33□□□□□ -0.92
RXRB-202ENST00000374685 J3QL48 77 aa9.32□□□□□ -0.92
RXRB-202ENST00000374685 TPRXLQ17RH7 258 aa9.28□□□□□ -0.92
RXRB-202ENST00000374685 S4R3F8 94 aa9.25□□□□□ -0.93
RXRB-202ENST00000374685 KRTAP3-3Q9BYR6 98 aa9.23□□□□□ -0.93
RXRB-202ENST00000374685 SPINT4Q6UDR6 99 aa9.2□□□□□ -0.94
RXRB-202ENST00000374685 KRTAP15-1Q3LI76 137 aa9.14□□□□□ -0.95
RXRB-202ENST00000374685 NDUFAF8A1L188 74 aa9.13□□□□□ -0.95
RXRB-202ENST00000374685 BIRC6Q9NR09 4857 aa9.09□□□□□ -0.95
RXRB-202ENST00000374685 A0A0D9SG42 100 aa9.07□□□□□ -0.96
RXRB-202ENST00000374685 MUC2Q02817 5179 aa9.07□□□□□ -0.96
RXRB-202ENST00000374685 KRTAP10-6P60371 365 aaPredicted RBP9.05□□□□□ -0.96
RXRB-202ENST00000374685 HERC1Q15751 4861 aa9.02□□□□□ -0.97
RXRB-202ENST00000374685 KRTAP3-2Q9BYR7 98 aa9.01□□□□□ -0.97
RXRB-202ENST00000374685 SEC61BP60468 96 aaKnown RBP9□□□□□ -0.97
RXRB-202ENST00000374685 KRTAP13-4Q3LI77 160 aa9□□□□□ -0.97
RXRB-202ENST00000374685 PCLOQ9Y6V0 5065 aa8.99□□□□□ -0.97
RXRB-202ENST00000374685 KRTAP4-1Q9BYQ7 146 aa8.97□□□□□ -0.97
RXRB-202ENST00000374685 C10orf95Q9H7T3 257 aa8.95□□□□□ -0.98
RXRB-202ENST00000374685 MUC17Q685J3 4493 aa8.93□□□□□ -0.98
RXRB-202ENST00000374685 A0A0A0MQY5 61 aa8.91□□□□□ -0.98
RXRB-202ENST00000374685 HMCN2Q8NDA2 5059 aa8.71□□□□□ -1.01
RXRB-202ENST00000374685 KRTAP12-2P59991 146 aa8.68□□□□□ -1.02
RXRB-202ENST00000374685 M0QZ58 72 aa8.67□□□□□ -1.02
RXRB-202ENST00000374685 FAT4Q6V0I7 4981 aa8.65□□□□□ -1.02
RXRB-202ENST00000374685 R4GN34 69 aa8.64□□□□□ -1.03
RXRB-202ENST00000374685 LORP23490 312 aaPredicted RBP8.62□□□□□ -1.03
RXRB-202ENST00000374685 RNF213Q63HN8 5207 aa8.61□□□□□ -1.03
RXRB-202ENST00000374685 KRTAP19-2Q3LHN2 52 aa8.6□□□□□ -1.03
RXRB-202ENST00000374685 KRTAP12-1P59990 96 aa8.58□□□□□ -1.04
RXRB-202ENST00000374685 LUZP6Q538Z0 58 aa8.57□□□□□ -1.04
RXRB-202ENST00000374685 UBR4Q5T4S7 5183 aa8.55□□□□□ -1.04
RXRB-202ENST00000374685 FLGP20930 4061 aaPredicted RBP8.48□□□□□ -1.05
RXRB-202ENST00000374685 PLAC4Q8WY50 150 aa8.36□□□□□ -1.07
RXRB-202ENST00000374685 M0R2T5 61 aa8.34□□□□□ -1.07
RXRB-202ENST00000374685 LCE2CQ5TA81 110 aa8.27□□□□□ -1.09
RXRB-202ENST00000374685 CAMK2N1Q7Z7J9 78 aa8.21□□□□□ -1.1
RXRB-202ENST00000374685 MT1HP80294 61 aa8.12□□□□□ -1.11
RXRB-202ENST00000374685 KRTAP10-10P60014 251 aa8.01□□□□□ -1.13
RXRB-202ENST00000374685 PP632Q6XCG6 107 aa7.97□□□□□ -1.13
RXRB-202ENST00000374685 MT1FP04733 61 aa7.94□□□□□ -1.14
RXRB-202ENST00000374685 MT2AP02795 61 aa7.92□□□□□ -1.14
RXRB-202ENST00000374685 KRTAP19-1Q8IUB9 90 aa7.91□□□□□ -1.14
RXRB-202ENST00000374685 KRTAP9-8Q9BYQ0 159 aa7.85□□□□□ -1.15
RXRB-202ENST00000374685 SPRR2GQ9BYE4 73 aa7.84□□□□□ -1.15
RXRB-202ENST00000374685 SPRR5A0A1B0GTR4 108 aa7.74□□□□□ -1.17
RXRB-202ENST00000374685 TNP1P09430 55 aa7.73□□□□□ -1.17
RXRB-202ENST00000374685 PRO2289Q9P1D8 64 aa7.6□□□□□ -1.19
RXRB-202ENST00000374685 USH2AO75445 5202 aa7.59□□□□□ -1.19
RXRB-202ENST00000374685 KRTAP23-1A1A580 65 aa7.56□□□□□ -1.2
RXRB-202ENST00000374685 MT1BP07438 61 aa7.54□□□□□ -1.2
RXRB-202ENST00000374685 KRTAP9-3Q9BYQ3 159 aa7.52□□□□□ -1.21
RXRB-202ENST00000374685 KRTAP19-8Q3LI54 63 aa7.51□□□□□ -1.21
RXRB-202ENST00000374685 LCE3AQ5TA76 89 aa7.42□□□□□ -1.22
RXRB-202ENST00000374685 MT1XP80297 61 aa7.42□□□□□ -1.22
RXRB-202ENST00000374685 KRTAP10-5P60370 271 aa7.42□□□□□ -1.22
RXRB-202ENST00000374685 INE1O15225 51 aa7.37□□□□□ -1.23
RXRB-202ENST00000374685 LCE2BO14633 110 aa7.35□□□□□ -1.23
RXRB-202ENST00000374685 LCE2AQ5TA79 106 aaPredicted RBP7.34□□□□□ -1.23
RXRB-202ENST00000374685 KRTAP10-7P60409 375 aaPredicted RBP7.28□□□□□ -1.24
RXRB-202ENST00000374685 KMT2DO14686 5537 aa7.27□□□□□ -1.25
RXRB-202ENST00000374685 FSIP2Q5CZC0 6907 aa7.26□□□□□ -1.25
RXRB-202ENST00000374685 KRTAP10-12P60413 245 aa7.22□□□□□ -1.25
RXRB-202ENST00000374685 KRTAP8-1Q8IUC2 63 aa7.07□□□□□ -1.28
RXRB-202ENST00000374685 KRTAP12-3P60328 96 aa7.05□□□□□ -1.28
RXRB-202ENST00000374685 KRTAP4-8A0A0G2JLE6 195 aa6.98□□□□□ -1.29
RXRB-202ENST00000374685 KRTAP4-8Q9BYQ9 185 aa6.98□□□□□ -1.29
RXRB-202ENST00000374685 SSPOA2VEC9 5147 aa6.94□□□□□ -1.3
RXRB-202ENST00000374685 KRTAP19-5Q3LI72 72 aa6.9□□□□□ -1.3
RXRB-202ENST00000374685 KRTAP19-7Q3SYF9 63 aa6.6□□□□□ -1.35
RXRB-202ENST00000374685 LCE3CQ5T5A8 94 aa6.57□□□□□ -1.36
RXRB-202ENST00000374685 KRTAP19-6Q3LI70 58 aa6.57□□□□□ -1.36
RXRB-202ENST00000374685 KRTAP4-7Q9BYR0 210 aa6.56□□□□□ -1.36
RXRB-202ENST00000374685 FCGBPQ9Y6R7 5405 aaPredicted RBP6.54□□□□□ -1.36
RXRB-202ENST00000374685 MUC12Q9UKN1 5478 aa6.51□□□□□ -1.37
RXRB-202ENST00000374685 MT1EP04732 61 aa6.43□□□□□ -1.38
RXRB-202ENST00000374685 MT1LQ93083 61 aa6.39□□□□□ -1.39
RXRB-202ENST00000374685 KRTAP9-6A8MVA2 160 aa6.37□□□□□ -1.39
RXRB-202ENST00000374685 MACF1Q9UPN3 7388 aaKnown RBP6.35□□□□□ -1.39
RXRB-202ENST00000374685 DSTQ03001 7570 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms