RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 RYR1P21817 5038 aa8.92□□□□□ -0.98
RXRB-201ENST00000374680 H0YAA0 97 aa8.9□□□□□ -0.98
RXRB-201ENST00000374680 A0A1B0GU33 70 aa8.89□□□□□ -0.99
RXRB-201ENST00000374680 LPAP08519 4548 aa8.86□□□□□ -0.99
RXRB-201ENST00000374680 XP32Q5T750 250 aa8.85□□□□□ -0.99
RXRB-201ENST00000374680 LRP2P98164 4655 aa8.82□□□□□ -1
RXRB-201ENST00000374680 EPPK1P58107 5090 aaKnown RBP8.81□□□□□ -1
RXRB-201ENST00000374680 RPL37P61927 97 aaKnown RBP8.8□□□□□ -1
RXRB-201ENST00000374680 H1FX-AS1Q4G0G2 97 aa8.8□□□□□ -1
RXRB-201ENST00000374680 LINC01554Q52M75 96 aa8.79□□□□□ -1
RXRB-201ENST00000374680 CSAG1Q6PB30 78 aa8.75□□□□□ -1.01
RXRB-201ENST00000374680 MT1HL1P0DM35 61 aa8.74□□□□□ -1.01
RXRB-201ENST00000374680 A0A0D9SG42 100 aa8.73□□□□□ -1.01
RXRB-201ENST00000374680 CRIPTQ9P021 101 aa8.72□□□□□ -1.01
RXRB-201ENST00000374680 KRTAP3-3Q9BYR6 98 aa8.71□□□□□ -1.02
RXRB-201ENST00000374680 ABCA13Q86UQ4 5058 aa8.69□□□□□ -1.02
RXRB-201ENST00000374680 S4R3F8 94 aa8.66□□□□□ -1.02
RXRB-201ENST00000374680 KRTAP4-5Q9BYR2 181 aa8.66□□□□□ -1.02
RXRB-201ENST00000374680 KRTAP13-4Q3LI77 160 aa8.62□□□□□ -1.03
RXRB-201ENST00000374680 KRTAP10-6P60371 365 aaPredicted RBP8.61□□□□□ -1.03
RXRB-201ENST00000374680 P0C880 135 aa8.6□□□□□ -1.03
RXRB-201ENST00000374680 KRTAP3-2Q9BYR7 98 aa8.55□□□□□ -1.04
RXRB-201ENST00000374680 K7ERS5 55 aa8.53□□□□□ -1.04
RXRB-201ENST00000374680 KRTAP25-1Q3LHN0 102 aa8.46□□□□□ -1.06
RXRB-201ENST00000374680 TPRXLQ17RH7 258 aa8.4□□□□□ -1.06
RXRB-201ENST00000374680 SPINT4Q6UDR6 99 aa8.4□□□□□ -1.06
RXRB-201ENST00000374680 MUC2Q02817 5179 aa8.33□□□□□ -1.08
RXRB-201ENST00000374680 J3QL48 77 aa8.33□□□□□ -1.08
RXRB-201ENST00000374680 HERC2O95714 4834 aa8.33□□□□□ -1.08
RXRB-201ENST00000374680 KRTAP12-2P59991 146 aa8.32□□□□□ -1.08
RXRB-201ENST00000374680 ROMO1P60602 79 aa8.31□□□□□ -1.08
RXRB-201ENST00000374680 C10orf95Q9H7T3 257 aa8.29□□□□□ -1.08
RXRB-201ENST00000374680 KRTAP4-1Q9BYQ7 146 aa8.23□□□□□ -1.09
RXRB-201ENST00000374680 H3BS24 57 aa8.23□□□□□ -1.09
RXRB-201ENST00000374680 KRTAP12-1P59990 96 aa8.19□□□□□ -1.1
RXRB-201ENST00000374680 M0QZ58 72 aa8.18□□□□□ -1.1
RXRB-201ENST00000374680 SEC61BP60468 96 aaKnown RBP8.16□□□□□ -1.1
RXRB-201ENST00000374680 MUC17Q685J3 4493 aa8.16□□□□□ -1.1
RXRB-201ENST00000374680 LORP23490 312 aaPredicted RBP8.13□□□□□ -1.11
RXRB-201ENST00000374680 R4GN34 69 aa8.12□□□□□ -1.11
RXRB-201ENST00000374680 HERC1Q15751 4861 aa8.08□□□□□ -1.12
RXRB-201ENST00000374680 PCLOQ9Y6V0 5065 aa7.91□□□□□ -1.14
RXRB-201ENST00000374680 FAT4Q6V0I7 4981 aa7.91□□□□□ -1.14
RXRB-201ENST00000374680 BIRC6Q9NR09 4857 aa7.89□□□□□ -1.15
RXRB-201ENST00000374680 KRTAP19-2Q3LHN2 52 aa7.86□□□□□ -1.15
RXRB-201ENST00000374680 RNF213Q63HN8 5207 aa7.81□□□□□ -1.16
RXRB-201ENST00000374680 CAMK2N1Q7Z7J9 78 aa7.75□□□□□ -1.17
RXRB-201ENST00000374680 FLGP20930 4061 aaPredicted RBP7.75□□□□□ -1.17
RXRB-201ENST00000374680 HMCN2Q8NDA2 5059 aa7.73□□□□□ -1.17
RXRB-201ENST00000374680 KRTAP15-1Q3LI76 137 aa7.72□□□□□ -1.17
RXRB-201ENST00000374680 UBR4Q5T4S7 5183 aa7.64□□□□□ -1.19
RXRB-201ENST00000374680 NDUFAF8A1L188 74 aa7.63□□□□□ -1.19
RXRB-201ENST00000374680 M0R2T5 61 aa7.6□□□□□ -1.19
RXRB-201ENST00000374680 LCE2CQ5TA81 110 aa7.49□□□□□ -1.21
RXRB-201ENST00000374680 PLAC4Q8WY50 150 aa7.4□□□□□ -1.22
RXRB-201ENST00000374680 KRTAP10-10P60014 251 aa7.33□□□□□ -1.24
RXRB-201ENST00000374680 MT1HP80294 61 aa7.33□□□□□ -1.24
RXRB-201ENST00000374680 TNP1P09430 55 aa7.31□□□□□ -1.24
RXRB-201ENST00000374680 KRTAP19-1Q8IUB9 90 aa7.29□□□□□ -1.24
RXRB-201ENST00000374680 PP632Q6XCG6 107 aa7.26□□□□□ -1.25
RXRB-201ENST00000374680 A0A0A0MQY5 61 aa7.24□□□□□ -1.25
RXRB-201ENST00000374680 MT1FP04733 61 aa7.24□□□□□ -1.25
RXRB-201ENST00000374680 MT2AP02795 61 aa7.21□□□□□ -1.26
RXRB-201ENST00000374680 SPRR2GQ9BYE4 73 aa7.2□□□□□ -1.26
RXRB-201ENST00000374680 KRTAP9-8Q9BYQ0 159 aa7.13□□□□□ -1.27
RXRB-201ENST00000374680 LUZP6Q538Z0 58 aa7.11□□□□□ -1.27
RXRB-201ENST00000374680 LCE3AQ5TA76 89 aa7.02□□□□□ -1.29
RXRB-201ENST00000374680 USH2AO75445 5202 aa6.96□□□□□ -1.29
RXRB-201ENST00000374680 KRTAP23-1A1A580 65 aa6.94□□□□□ -1.3
RXRB-201ENST00000374680 MT1BP07438 61 aa6.92□□□□□ -1.3
RXRB-201ENST00000374680 KRTAP10-5P60370 271 aa6.86□□□□□ -1.31
RXRB-201ENST00000374680 MT1XP80297 61 aa6.85□□□□□ -1.31
RXRB-201ENST00000374680 KRTAP19-8Q3LI54 63 aa6.85□□□□□ -1.31
RXRB-201ENST00000374680 KRTAP9-3Q9BYQ3 159 aa6.81□□□□□ -1.32
RXRB-201ENST00000374680 KMT2DO14686 5537 aa6.79□□□□□ -1.32
RXRB-201ENST00000374680 SPRR5A0A1B0GTR4 108 aa6.77□□□□□ -1.33
RXRB-201ENST00000374680 KRTAP10-7P60409 375 aaPredicted RBP6.77□□□□□ -1.33
RXRB-201ENST00000374680 KRTAP10-12P60413 245 aa6.71□□□□□ -1.34
RXRB-201ENST00000374680 LCE2BO14633 110 aa6.65□□□□□ -1.34
RXRB-201ENST00000374680 KRTAP8-1Q8IUC2 63 aa6.64□□□□□ -1.35
RXRB-201ENST00000374680 KRTAP12-3P60328 96 aa6.63□□□□□ -1.35
RXRB-201ENST00000374680 FSIP2Q5CZC0 6907 aa6.61□□□□□ -1.35
RXRB-201ENST00000374680 PRO2289Q9P1D8 64 aa6.55□□□□□ -1.36
RXRB-201ENST00000374680 KRTAP4-8A0A0G2JLE6 195 aa6.49□□□□□ -1.37
RXRB-201ENST00000374680 KRTAP4-8Q9BYQ9 185 aa6.49□□□□□ -1.37
RXRB-201ENST00000374680 KRTAP19-5Q3LI72 72 aa6.45□□□□□ -1.38
RXRB-201ENST00000374680 LCE2AQ5TA79 106 aaPredicted RBP6.44□□□□□ -1.38
RXRB-201ENST00000374680 SSPOA2VEC9 5147 aa6.23□□□□□ -1.41
RXRB-201ENST00000374680 KRTAP4-7Q9BYR0 210 aa6.22□□□□□ -1.41
RXRB-201ENST00000374680 LCE3CQ5T5A8 94 aa6.19□□□□□ -1.42
RXRB-201ENST00000374680 INE1O15225 51 aa6.17□□□□□ -1.42
RXRB-201ENST00000374680 KRTAP19-7Q3SYF9 63 aa6.1□□□□□ -1.43
RXRB-201ENST00000374680 KRTAP9-6A8MVA2 160 aa6.07□□□□□ -1.44
RXRB-201ENST00000374680 MUC12Q9UKN1 5478 aa6.01□□□□□ -1.45
RXRB-201ENST00000374680 FCGBPQ9Y6R7 5405 aaPredicted RBP5.99□□□□□ -1.45
RXRB-201ENST00000374680 DSTQ03001 7570 aaKnown RBP5.95□□□□□ -1.46
RXRB-201ENST00000374680 MT1EP04732 61 aa5.91□□□□□ -1.46
RXRB-201ENST00000374680 MT1LQ93083 61 aa5.9□□□□□ -1.46
RXRB-201ENST00000374680 KRTAP4-3Q9BYR4 195 aa5.85□□□□□ -1.47
RXRB-201ENST00000374680 KRTAP19-6Q3LI70 58 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms