RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 KRTAP9-8Q9BYQ0 159 aa7.3□□□□□ -1.24
PFDN6-202ENST00000374607 SNURFQ9Y675 71 aa7.29□□□□□ -1.24
PFDN6-202ENST00000374607 KRTAP10-10P60014 251 aa7.28□□□□□ -1.24
PFDN6-202ENST00000374607 C20orf197Q8N268 126 aa7.27□□□□□ -1.25
PFDN6-202ENST00000374607 CRCT1Q9UGL9 99 aa7.27□□□□□ -1.25
PFDN6-202ENST00000374607 NDUFC1O43677 76 aa7.25□□□□□ -1.25
PFDN6-202ENST00000374607 MT2AP02795 61 aa7.25□□□□□ -1.25
PFDN6-202ENST00000374607 FSIP2Q5CZC0 6907 aa7.22□□□□□ -1.25
PFDN6-202ENST00000374607 COX7CP15954 63 aa7.2□□□□□ -1.26
PFDN6-202ENST00000374607 DMAC1Q96GE9 116 aa7.2□□□□□ -1.26
PFDN6-202ENST00000374607 MT1FP04733 61 aa7.19□□□□□ -1.26
PFDN6-202ENST00000374607 ACYP2P14621 99 aa7.17□□□□□ -1.26
PFDN6-202ENST00000374607 ANAPC13Q9BS18 74 aa7.17□□□□□ -1.26
PFDN6-202ENST00000374607 PCP4P48539 62 aa7.16□□□□□ -1.26
PFDN6-202ENST00000374607 CHKB-CPT1BH3BT56 60 aa7.1□□□□□ -1.27
PFDN6-202ENST00000374607 SPANXA2-OT1Q8N9U9 137 aa7.1□□□□□ -1.27
PFDN6-202ENST00000374607 SPTSSBQ8NFR3 76 aa7.07□□□□□ -1.28
PFDN6-202ENST00000374607 KRTAP9-3Q9BYQ3 159 aa7.06□□□□□ -1.28
PFDN6-202ENST00000374607 KRTAP23-1A1A580 65 aa7.01□□□□□ -1.29
PFDN6-202ENST00000374607 H0YAA0 97 aa7□□□□□ -1.29
PFDN6-202ENST00000374607 ADM2Q7Z4H4 148 aa7□□□□□ -1.29
PFDN6-202ENST00000374607 USH2AO75445 5202 aa6.98□□□□□ -1.29
PFDN6-202ENST00000374607 H7BZZ5 65 aa6.97□□□□□ -1.29
PFDN6-202ENST00000374607 CCDC179H3BU77 68 aa6.95□□□□□ -1.3
PFDN6-202ENST00000374607 CYSTM1Q9H1C7 97 aa6.95□□□□□ -1.3
PFDN6-202ENST00000374607 CRIPTQ9P021 101 aa6.94□□□□□ -1.3
PFDN6-202ENST00000374607 SSPOA2VEC9 5147 aa6.92□□□□□ -1.3
PFDN6-202ENST00000374607 COA5Q86WW8 74 aa6.91□□□□□ -1.3
PFDN6-202ENST00000374607 KRTAP19-1Q8IUB9 90 aa6.85□□□□□ -1.31
PFDN6-202ENST00000374607 SPRR2GQ9BYE4 73 aa6.84□□□□□ -1.31
PFDN6-202ENST00000374607 A0A0A0MQY5 61 aa6.83□□□□□ -1.32
PFDN6-202ENST00000374607 R4GN34 69 aa6.83□□□□□ -1.32
PFDN6-202ENST00000374607 P0C880 135 aa6.82□□□□□ -1.32
PFDN6-202ENST00000374607 ATP5EP56381 51 aaPredicted RBP6.81□□□□□ -1.32
PFDN6-202ENST00000374607 Q5VV11 94 aa6.81□□□□□ -1.32
PFDN6-202ENST00000374607 M0QZ58 72 aa6.78□□□□□ -1.32
PFDN6-202ENST00000374607 SEC61GP60059 68 aa6.78□□□□□ -1.32
PFDN6-202ENST00000374607 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.76□□□□□ -1.33
PFDN6-202ENST00000374607 FCGBPQ9Y6R7 5405 aaPredicted RBP6.76□□□□□ -1.33
PFDN6-202ENST00000374607 TMEM258P61165 79 aa6.74□□□□□ -1.33
PFDN6-202ENST00000374607 SERP1Q9Y6X1 66 aa6.74□□□□□ -1.33
PFDN6-202ENST00000374607 KRTAP19-8Q3LI54 63 aa6.72□□□□□ -1.33
PFDN6-202ENST00000374607 KRTAP19-4Q3LI73 84 aa6.71□□□□□ -1.34
PFDN6-202ENST00000374607 LINC01554Q52M75 96 aa6.7□□□□□ -1.34
PFDN6-202ENST00000374607 KRTAP19-6Q3LI70 58 aa6.68□□□□□ -1.34
PFDN6-202ENST00000374607 KRTAP9-7A8MTY7 169 aa6.67□□□□□ -1.34
PFDN6-202ENST00000374607 MT1BP07438 61 aa6.67□□□□□ -1.34
PFDN6-202ENST00000374607 PLAC4Q8WY50 150 aa6.65□□□□□ -1.34
PFDN6-202ENST00000374607 A0A1B0GU69 56 aa6.61□□□□□ -1.35
PFDN6-202ENST00000374607 A6NN06 94 aa6.59□□□□□ -1.35
PFDN6-202ENST00000374607 PRR15LQ9BU68 103 aa6.55□□□□□ -1.36
PFDN6-202ENST00000374607 A0A1B0GU33 70 aa6.54□□□□□ -1.36
PFDN6-202ENST00000374607 MACF1Q9UPN3 7388 aaKnown RBP6.5□□□□□ -1.37
PFDN6-202ENST00000374607 PRO2289Q9P1D8 64 aa6.49□□□□□ -1.37
PFDN6-202ENST00000374607 KRTAP10-5P60370 271 aa6.48□□□□□ -1.37
PFDN6-202ENST00000374607 KRTAP13-4Q3LI77 160 aa6.48□□□□□ -1.37
PFDN6-202ENST00000374607 SPATA8Q6RVD6 105 aa6.45□□□□□ -1.38
PFDN6-202ENST00000374607 LINC01558Q9Y6Z2 57 aa6.45□□□□□ -1.38
PFDN6-202ENST00000374607 A0A0D9SG42 100 aa6.44□□□□□ -1.38
PFDN6-202ENST00000374607 LOC100996750A0A140TA64 210 aa6.42□□□□□ -1.38
PFDN6-202ENST00000374607 KRTAP4-6Q9BYQ5 205 aa6.42□□□□□ -1.38
PFDN6-202ENST00000374607 SYNE2Q8WXH0 6885 aaKnown RBP6.4□□□□□ -1.38
PFDN6-202ENST00000374607 SMIM26A0A096LP01 95 aa6.39□□□□□ -1.39
PFDN6-202ENST00000374607 CAMK2N1Q7Z7J9 78 aa6.37□□□□□ -1.39
PFDN6-202ENST00000374607 V9GYY9 64 aa6.36□□□□□ -1.39
PFDN6-202ENST00000374607 MT1XP80297 61 aa6.35□□□□□ -1.39
PFDN6-202ENST00000374607 SPINT4Q6UDR6 99 aa6.35□□□□□ -1.39
PFDN6-202ENST00000374607 KRTAP6-3Q3LI67 103 aa6.34□□□□□ -1.39
PFDN6-202ENST00000374607 UQCR11O14957 56 aa6.29□□□□□ -1.4
PFDN6-202ENST00000374607 A8MU10 97 aa6.27□□□□□ -1.41
PFDN6-202ENST00000374607 Q1T7F1 81 aa6.26□□□□□ -1.41
PFDN6-202ENST00000374607 PSPHP1O15172 72 aa6.25□□□□□ -1.41
PFDN6-202ENST00000374607 RPS28P62857 69 aaKnown RBP6.24□□□□□ -1.41
PFDN6-202ENST00000374607 KRTAP12-1P59990 96 aa6.23□□□□□ -1.41
PFDN6-202ENST00000374607 KRTAP12-2P59991 146 aa6.2□□□□□ -1.42
PFDN6-202ENST00000374607 KRTAP4-12Q9BQ66 201 aa6.2□□□□□ -1.42
PFDN6-202ENST00000374607 MIR22HGQ0VDD5 57 aa6.18□□□□□ -1.42
PFDN6-202ENST00000374607 KRTAP4-8Q9BYQ9 185 aa6.17□□□□□ -1.42
PFDN6-202ENST00000374607 LCE4AQ5TA78 99 aa6.11□□□□□ -1.43
PFDN6-202ENST00000374607 A6NED7 52 aa6.1□□□□□ -1.43
PFDN6-202ENST00000374607 KRTAP10-7P60409 375 aaPredicted RBP6.09□□□□□ -1.43
PFDN6-202ENST00000374607 K7ERS5 55 aa6.08□□□□□ -1.44
PFDN6-202ENST00000374607 NEBP20929 6669 aa6.06□□□□□ -1.44
PFDN6-202ENST00000374607 KRTAP5-9P26371 169 aa6.05□□□□□ -1.44
PFDN6-202ENST00000374607 KRTAP8-1Q8IUC2 63 aa6.05□□□□□ -1.44
PFDN6-202ENST00000374607 KRTAP10-12P60413 245 aa6.04□□□□□ -1.44
PFDN6-202ENST00000374607 MUC12Q9UKN1 5478 aa6.03□□□□□ -1.44
PFDN6-202ENST00000374607 KRTAP15-1Q3LI76 137 aa6.02□□□□□ -1.45
PFDN6-202ENST00000374607 KMT2DO14686 5537 aa5.98□□□□□ -1.45
PFDN6-202ENST00000374607 KRTAP4-8A0A0G2JLE6 195 aa5.98□□□□□ -1.45
PFDN6-202ENST00000374607 SPRR2FQ96RM1 72 aa5.95□□□□□ -1.46
PFDN6-202ENST00000374607 KRTAP9-4Q9BYQ2 154 aa5.94□□□□□ -1.46
PFDN6-202ENST00000374607 TNP1P09430 55 aa5.93□□□□□ -1.46
PFDN6-202ENST00000374607 KRTAP9-9Q9BYP9 154 aa5.93□□□□□ -1.46
PFDN6-202ENST00000374607 C10orf95Q9H7T3 257 aa5.91□□□□□ -1.46
PFDN6-202ENST00000374607 MDN1Q9NU22 5596 aa5.91□□□□□ -1.46
PFDN6-202ENST00000374607 LCE3BQ5TA77 95 aa5.89□□□□□ -1.47
PFDN6-202ENST00000374607 KRTAP20-1Q3LI63 56 aa5.86□□□□□ -1.47
PFDN6-202ENST00000374607 CDC42SE1Q9NRR8 79 aa5.84□□□□□ -1.47
PFDN6-202ENST00000374607 SPRR2EP22531 72 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms