RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 P0C880 135 aa6.92□□□□□ -1.3
CLIC4-201ENST00000374379 VPS13BQ7Z7G8 4022 aa6.9□□□□□ -1.31
CLIC4-201ENST00000374379 HECTD4Q9Y4D8 3996 aa6.89□□□□□ -1.31
CLIC4-201ENST00000374379 TPRXLQ17RH7 258 aa6.88□□□□□ -1.31
CLIC4-201ENST00000374379 ALMS1Q8TCU4 4167 aa6.86□□□□□ -1.31
CLIC4-201ENST00000374379 MYCBP2O75592 4640 aa6.83□□□□□ -1.32
CLIC4-201ENST00000374379 MT1HL1P0DM35 61 aa6.82□□□□□ -1.32
CLIC4-201ENST00000374379 KRTAP4-5Q9BYR2 181 aa6.82□□□□□ -1.32
CLIC4-201ENST00000374379 PKHD1P08F94 4074 aa6.81□□□□□ -1.32
CLIC4-201ENST00000374379 KRTAP25-1Q3LHN0 102 aa6.79□□□□□ -1.32
CLIC4-201ENST00000374379 KIAA1109Q2LD37 5005 aa6.79□□□□□ -1.32
CLIC4-201ENST00000374379 C10orf95Q9H7T3 257 aa6.76□□□□□ -1.33
CLIC4-201ENST00000374379 SACSQ9NZJ4 4579 aa6.74□□□□□ -1.33
CLIC4-201ENST00000374379 LRP1Q07954 4544 aaKnown RBP6.74□□□□□ -1.33
CLIC4-201ENST00000374379 RYR1P21817 5038 aa6.73□□□□□ -1.33
CLIC4-201ENST00000374379 APOBP04114 4563 aaKnown RBP6.7□□□□□ -1.34
CLIC4-201ENST00000374379 FAT2Q9NYQ8 4349 aa6.69□□□□□ -1.34
CLIC4-201ENST00000374379 FAT3Q8TDW7 4589 aa6.68□□□□□ -1.34
CLIC4-201ENST00000374379 KRTAP13-4Q3LI77 160 aa6.66□□□□□ -1.34
CLIC4-201ENST00000374379 RYR3Q15413 4870 aa6.66□□□□□ -1.34
CLIC4-201ENST00000374379 KMT2CQ8NEZ4 4911 aaKnown RBP6.64□□□□□ -1.35
CLIC4-201ENST00000374379 KRTAP10-6P60371 365 aaPredicted RBP6.64□□□□□ -1.35
CLIC4-201ENST00000374379 KRTAP3-3Q9BYR6 98 aa6.61□□□□□ -1.35
CLIC4-201ENST00000374379 KRTAP12-2P59991 146 aa6.59□□□□□ -1.35
CLIC4-201ENST00000374379 KRTAP17-1Q9BYP8 105 aa6.56□□□□□ -1.36
CLIC4-201ENST00000374379 RYR2Q92736 4967 aa6.55□□□□□ -1.36
CLIC4-201ENST00000374379 KRTAP3-2Q9BYR7 98 aa6.51□□□□□ -1.37
CLIC4-201ENST00000374379 PKD1P98161 4303 aa6.51□□□□□ -1.37
CLIC4-201ENST00000374379 PLAC4Q8WY50 150 aa6.51□□□□□ -1.37
CLIC4-201ENST00000374379 H3BS24 57 aa6.5□□□□□ -1.37
CLIC4-201ENST00000374379 KRTAP12-1P59990 96 aa6.48□□□□□ -1.37
CLIC4-201ENST00000374379 LUZP6Q538Z0 58 aa6.44□□□□□ -1.38
CLIC4-201ENST00000374379 LRP2P98164 4655 aa6.38□□□□□ -1.39
CLIC4-201ENST00000374379 KRTAP10-10P60014 251 aa6.37□□□□□ -1.39
CLIC4-201ENST00000374379 NDUFAF8A1L188 74 aa6.36□□□□□ -1.39
CLIC4-201ENST00000374379 HSPG2P98160 4391 aa6.34□□□□□ -1.39
CLIC4-201ENST00000374379 TNP1P09430 55 aa6.33□□□□□ -1.4
CLIC4-201ENST00000374379 KRTAP4-1Q9BYQ7 146 aa6.3□□□□□ -1.4
CLIC4-201ENST00000374379 LORP23490 312 aaPredicted RBP6.29□□□□□ -1.4
CLIC4-201ENST00000374379 HERC2O95714 4834 aa6.24□□□□□ -1.41
CLIC4-201ENST00000374379 EPPK1P58107 5090 aaKnown RBP6.23□□□□□ -1.41
CLIC4-201ENST00000374379 LPAP08519 4548 aa6.21□□□□□ -1.41
CLIC4-201ENST00000374379 PKHD1L1Q86WI1 4243 aa6.15□□□□□ -1.42
CLIC4-201ENST00000374379 PP632Q6XCG6 107 aa6.1□□□□□ -1.43
CLIC4-201ENST00000374379 TNXBP22105 4242 aa6.06□□□□□ -1.44
CLIC4-201ENST00000374379 ABCA13Q86UQ4 5058 aa6.02□□□□□ -1.45
CLIC4-201ENST00000374379 A0A0A0MQY5 61 aa5.98□□□□□ -1.45
CLIC4-201ENST00000374379 MUC2Q02817 5179 aa5.89□□□□□ -1.47
CLIC4-201ENST00000374379 BIRC6Q9NR09 4857 aa5.88□□□□□ -1.47
CLIC4-201ENST00000374379 PRO2289Q9P1D8 64 aa5.83□□□□□ -1.48
CLIC4-201ENST00000374379 HERC1Q15751 4861 aa5.82□□□□□ -1.48
CLIC4-201ENST00000374379 KRTAP15-1Q3LI76 137 aa5.81□□□□□ -1.48
CLIC4-201ENST00000374379 MT1HP80294 61 aa5.79□□□□□ -1.48
CLIC4-201ENST00000374379 RNF213Q63HN8 5207 aa5.74□□□□□ -1.49
CLIC4-201ENST00000374379 PCLOQ9Y6V0 5065 aa5.73□□□□□ -1.49
CLIC4-201ENST00000374379 MT2AP02795 61 aa5.7□□□□□ -1.5
CLIC4-201ENST00000374379 FAT4Q6V0I7 4981 aa5.7□□□□□ -1.5
CLIC4-201ENST00000374379 MT1FP04733 61 aa5.69□□□□□ -1.5
CLIC4-201ENST00000374379 LCE3AQ5TA76 89 aa5.66□□□□□ -1.5
CLIC4-201ENST00000374379 KRTAP10-12P60413 245 aa5.61□□□□□ -1.51
CLIC4-201ENST00000374379 UBR4Q5T4S7 5183 aa5.6□□□□□ -1.51
CLIC4-201ENST00000374379 KRTAP19-2Q3LHN2 52 aa5.6□□□□□ -1.51
CLIC4-201ENST00000374379 SPRR2GQ9BYE4 73 aa5.6□□□□□ -1.51
CLIC4-201ENST00000374379 LCE2CQ5TA81 110 aa5.58□□□□□ -1.52
CLIC4-201ENST00000374379 KRTAP19-1Q8IUB9 90 aa5.57□□□□□ -1.52
CLIC4-201ENST00000374379 MUC17Q685J3 4493 aa5.55□□□□□ -1.52
CLIC4-201ENST00000374379 KRTAP12-3P60328 96 aa5.5□□□□□ -1.53
CLIC4-201ENST00000374379 FLGP20930 4061 aaPredicted RBP5.49□□□□□ -1.53
CLIC4-201ENST00000374379 HMCN2Q8NDA2 5059 aa5.46□□□□□ -1.54
CLIC4-201ENST00000374379 KRTAP9-8Q9BYQ0 159 aa5.43□□□□□ -1.54
CLIC4-201ENST00000374379 FSIP2Q5CZC0 6907 aa5.4□□□□□ -1.54
CLIC4-201ENST00000374379 KRTAP23-1A1A580 65 aa5.38□□□□□ -1.55
CLIC4-201ENST00000374379 MT1BP07438 61 aa5.31□□□□□ -1.56
CLIC4-201ENST00000374379 KRTAP10-7P60409 375 aaPredicted RBP5.29□□□□□ -1.56
CLIC4-201ENST00000374379 KRTAP19-8Q3LI54 63 aa5.28□□□□□ -1.56
CLIC4-201ENST00000374379 MT1XP80297 61 aa5.27□□□□□ -1.57
CLIC4-201ENST00000374379 KRTAP10-5P60370 271 aa5.24□□□□□ -1.57
CLIC4-201ENST00000374379 CRCT1Q9UGL9 99 aa5.22□□□□□ -1.57
CLIC4-201ENST00000374379 KRTAP9-3Q9BYQ3 159 aa5.21□□□□□ -1.58
CLIC4-201ENST00000374379 KRTAP8-1Q8IUC2 63 aa5.19□□□□□ -1.58
CLIC4-201ENST00000374379 KRTAP19-5Q3LI72 72 aa5.18□□□□□ -1.58
CLIC4-201ENST00000374379 KRTAP4-8A0A0G2JLE6 195 aa5.12□□□□□ -1.59
CLIC4-201ENST00000374379 KRTAP4-8Q9BYQ9 185 aa5.12□□□□□ -1.59
CLIC4-201ENST00000374379 LCE2BO14633 110 aa5.11□□□□□ -1.59
CLIC4-201ENST00000374379 USH2AO75445 5202 aa5.08□□□□□ -1.6
CLIC4-201ENST00000374379 LCE3CQ5T5A8 94 aa4.95□□□□□ -1.62
CLIC4-201ENST00000374379 KMT2DO14686 5537 aa4.9□□□□□ -1.63
CLIC4-201ENST00000374379 SPRR5A0A1B0GTR4 108 aa4.88□□□□□ -1.63
CLIC4-201ENST00000374379 LCE2AQ5TA79 106 aaPredicted RBP4.87□□□□□ -1.63
CLIC4-201ENST00000374379 KRTAP4-7Q9BYR0 210 aa4.85□□□□□ -1.63
CLIC4-201ENST00000374379 SPRR2FQ96RM1 72 aa4.84□□□□□ -1.63
CLIC4-201ENST00000374379 INE1O15225 51 aa4.82□□□□□ -1.64
CLIC4-201ENST00000374379 DSTQ03001 7570 aaKnown RBP4.72□□□□□ -1.65
CLIC4-201ENST00000374379 OBSCNQ5VST9 7968 aa4.7□□□□□ -1.66
CLIC4-201ENST00000374379 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
CLIC4-201ENST00000374379 MT1GP13640 62 aa4.66□□□□□ -1.66
CLIC4-201ENST00000374379 MT1EP04732 61 aa4.62□□□□□ -1.67
CLIC4-201ENST00000374379 MT1LQ93083 61 aa4.62□□□□□ -1.67
CLIC4-201ENST00000374379 FCGBPQ9Y6R7 5405 aaPredicted RBP4.62□□□□□ -1.67
CLIC4-201ENST00000374379 KRTAP19-7Q3SYF9 63 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms