RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 IGKV2-30P06310 120 aa11.34□□□□□ -0.59
SYNC-201ENST00000373484 RBM12B-AS1Q9P1G2 102 aa11.3□□□□□ -0.6
SYNC-201ENST00000373484 KRTAP16-1A8MUX0 517 aa11.23□□□□□ -0.61
SYNC-201ENST00000373484 A0A1B0GU69 56 aa11.22□□□□□ -0.61
SYNC-201ENST00000373484 SPATA8Q6RVD6 105 aa11.21□□□□□ -0.62
SYNC-201ENST00000373484 UQCR11O14957 56 aa11.12□□□□□ -0.63
SYNC-201ENST00000373484 MUC17Q685J3 4493 aa11.1□□□□□ -0.63
SYNC-201ENST00000373484 RNF213Q63HN8 5207 aa11.1□□□□□ -0.63
SYNC-201ENST00000373484 IGKV2D-30A0A075B6S6 120 aa11.09□□□□□ -0.63
SYNC-201ENST00000373484 C9orf92A6NGG3 77 aa11.09□□□□□ -0.63
SYNC-201ENST00000373484 XP32Q5T750 250 aa11.09□□□□□ -0.63
SYNC-201ENST00000373484 MIR22HGQ0VDD5 57 aa11.05□□□□□ -0.64
SYNC-201ENST00000373484 SEC61BP60468 96 aaKnown RBP10.96□□□□□ -0.65
SYNC-201ENST00000373484 MUC2Q02817 5179 aa10.94□□□□□ -0.66
SYNC-201ENST00000373484 RPL37P61927 97 aaKnown RBP10.88□□□□□ -0.67
SYNC-201ENST00000373484 PRAC1Q96KF2 57 aa10.81□□□□□ -0.68
SYNC-201ENST00000373484 KRTAP4-1Q9BYQ7 146 aa10.81□□□□□ -0.68
SYNC-201ENST00000373484 C20orf166-AS1Q96NR2 134 aa10.79□□□□□ -0.68
SYNC-201ENST00000373484 A8MUU9 505 aa10.76□□□□□ -0.69
SYNC-201ENST00000373484 LINC01554Q52M75 96 aa10.76□□□□□ -0.69
SYNC-201ENST00000373484 ADM2Q7Z4H4 148 aa10.74□□□□□ -0.69
SYNC-201ENST00000373484 FAT4Q6V0I7 4981 aa10.63□□□□□ -0.71
SYNC-201ENST00000373484 H0YAA0 97 aa10.58□□□□□ -0.72
SYNC-201ENST00000373484 CSAG1Q6PB30 78 aa10.57□□□□□ -0.72
SYNC-201ENST00000373484 A0A1B0GU33 70 aa10.56□□□□□ -0.72
SYNC-201ENST00000373484 KRTAP3-1Q9BYR8 98 aa10.54□□□□□ -0.72
SYNC-201ENST00000373484 H1FX-AS1Q4G0G2 97 aa10.53□□□□□ -0.72
SYNC-201ENST00000373484 KRTAP19-2Q3LHN2 52 aa10.51□□□□□ -0.73
SYNC-201ENST00000373484 LCE2AQ5TA79 106 aaPredicted RBP10.47□□□□□ -0.73
SYNC-201ENST00000373484 LCE2CQ5TA81 110 aa10.46□□□□□ -0.74
SYNC-201ENST00000373484 COX6B2Q6YFQ2 88 aa10.45□□□□□ -0.74
SYNC-201ENST00000373484 K7ERS5 55 aa10.39□□□□□ -0.75
SYNC-201ENST00000373484 KRTAP25-1Q3LHN0 102 aa10.38□□□□□ -0.75
SYNC-201ENST00000373484 MT1HP80294 61 aa10.29□□□□□ -0.76
SYNC-201ENST00000373484 FLGP20930 4061 aaPredicted RBP10.26□□□□□ -0.77
SYNC-201ENST00000373484 ROMO1P60602 79 aa10.13□□□□□ -0.79
SYNC-201ENST00000373484 KRTAP10-6P60371 365 aaPredicted RBP10.12□□□□□ -0.79
SYNC-201ENST00000373484 M0R2T5 61 aa10.11□□□□□ -0.79
SYNC-201ENST00000373484 KRTAP3-3Q9BYR6 98 aa10.1□□□□□ -0.79
SYNC-201ENST00000373484 KRTAP3-2Q9BYR7 98 aa10.03□□□□□ -0.8
SYNC-201ENST00000373484 LORP23490 312 aaPredicted RBP10.02□□□□□ -0.81
SYNC-201ENST00000373484 S4R3F8 94 aa10.01□□□□□ -0.81
SYNC-201ENST00000373484 H3BS24 57 aa9.94□□□□□ -0.82
SYNC-201ENST00000373484 KRTAP13-4Q3LI77 160 aa9.93□□□□□ -0.82
SYNC-201ENST00000373484 KRTAP9-2Q9BYQ4 174 aa9.82□□□□□ -0.84
SYNC-201ENST00000373484 A0A0D9SG42 100 aa9.82□□□□□ -0.84
SYNC-201ENST00000373484 CRIPTQ9P021 101 aa9.82□□□□□ -0.84
SYNC-201ENST00000373484 KRTAP9-8Q9BYQ0 159 aa9.81□□□□□ -0.84
SYNC-201ENST00000373484 P0C880 135 aa9.79□□□□□ -0.84
SYNC-201ENST00000373484 LCE2DQ5TA82 110 aaPredicted RBP9.78□□□□□ -0.84
SYNC-201ENST00000373484 M0QZ58 72 aa9.73□□□□□ -0.85
SYNC-201ENST00000373484 MT2AP02795 61 aa9.7□□□□□ -0.86
SYNC-201ENST00000373484 KRTAP12-1P59990 96 aa9.66□□□□□ -0.86
SYNC-201ENST00000373484 KRTAP12-2P59991 146 aa9.66□□□□□ -0.86
SYNC-201ENST00000373484 MT1FP04733 61 aa9.63□□□□□ -0.87
SYNC-201ENST00000373484 SPINT4Q6UDR6 99 aa9.61□□□□□ -0.87
SYNC-201ENST00000373484 KRTAP10-10P60014 251 aa9.58□□□□□ -0.88
SYNC-201ENST00000373484 C10orf95Q9H7T3 257 aa9.53□□□□□ -0.88
SYNC-201ENST00000373484 KRTAP15-1Q3LI76 137 aa9.51□□□□□ -0.89
SYNC-201ENST00000373484 KRTAP9-3Q9BYQ3 159 aa9.49□□□□□ -0.89
SYNC-201ENST00000373484 FSIP2Q5CZC0 6907 aa9.38□□□□□ -0.91
SYNC-201ENST00000373484 KRTAP9-6A0A140TA67 174 aa9.35□□□□□ -0.91
SYNC-201ENST00000373484 LCE2BO14633 110 aa9.35□□□□□ -0.91
SYNC-201ENST00000373484 CRCT1Q9UGL9 99 aa9.35□□□□□ -0.91
SYNC-201ENST00000373484 USH2AO75445 5202 aa9.32□□□□□ -0.92
SYNC-201ENST00000373484 R4GN34 69 aa9.27□□□□□ -0.93
SYNC-201ENST00000373484 NDUFAF8A1L188 74 aa9.21□□□□□ -0.93
SYNC-201ENST00000373484 KRTAP19-1Q8IUB9 90 aa9.17□□□□□ -0.94
SYNC-201ENST00000373484 SSPOA2VEC9 5147 aa9.16□□□□□ -0.94
SYNC-201ENST00000373484 SPRR2GQ9BYE4 73 aa9.12□□□□□ -0.95
SYNC-201ENST00000373484 PP632Q6XCG6 107 aa9.05□□□□□ -0.96
SYNC-201ENST00000373484 KRTAP19-8Q3LI54 63 aa9□□□□□ -0.97
SYNC-201ENST00000373484 PLAC4Q8WY50 150 aa8.98□□□□□ -0.97
SYNC-201ENST00000373484 KRTAP19-6Q3LI70 58 aa8.96□□□□□ -0.97
SYNC-201ENST00000373484 MT1BP07438 61 aa8.95□□□□□ -0.98
SYNC-201ENST00000373484 FCGBPQ9Y6R7 5405 aaPredicted RBP8.88□□□□□ -0.99
SYNC-201ENST00000373484 CAMK2N1Q7Z7J9 78 aa8.81□□□□□ -1
SYNC-201ENST00000373484 KRTAP23-1A1A580 65 aa8.8□□□□□ -1
SYNC-201ENST00000373484 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.69□□□□□ -1.02
SYNC-201ENST00000373484 LUZP6Q538Z0 58 aa8.68□□□□□ -1.02
SYNC-201ENST00000373484 KRTAP10-5P60370 271 aa8.66□□□□□ -1.02
SYNC-201ENST00000373484 TNP1P09430 55 aa8.61□□□□□ -1.03
SYNC-201ENST00000373484 MACF1Q9UPN3 7388 aaKnown RBP8.51□□□□□ -1.05
SYNC-201ENST00000373484 MT1XP80297 61 aa8.48□□□□□ -1.05
SYNC-201ENST00000373484 SPRR5A0A1B0GTR4 108 aa8.47□□□□□ -1.05
SYNC-201ENST00000373484 KRTAP9-7A8MTY7 169 aa8.47□□□□□ -1.05
SYNC-201ENST00000373484 PRO2289Q9P1D8 64 aa8.47□□□□□ -1.05
SYNC-201ENST00000373484 A0A0A0MQY5 61 aa8.43□□□□□ -1.06
SYNC-201ENST00000373484 SYNE2Q8WXH0 6885 aaKnown RBP8.32□□□□□ -1.08
SYNC-201ENST00000373484 KRTAP6-3Q3LI67 103 aa8.25□□□□□ -1.09
SYNC-201ENST00000373484 KMT2DO14686 5537 aa8.11□□□□□ -1.11
SYNC-201ENST00000373484 KRTAP10-7P60409 375 aaPredicted RBP8.1□□□□□ -1.11
SYNC-201ENST00000373484 KRTAP10-12P60413 245 aa8.06□□□□□ -1.12
SYNC-201ENST00000373484 KRTAP5-9P26371 169 aa8.06□□□□□ -1.12
SYNC-201ENST00000373484 LCE3AQ5TA76 89 aa8□□□□□ -1.13
SYNC-201ENST00000373484 KRTAP4-8A0A0G2JLE6 195 aa7.99□□□□□ -1.13
SYNC-201ENST00000373484 KRTAP4-8Q9BYQ9 185 aa7.99□□□□□ -1.13
SYNC-201ENST00000373484 KRTAP8-1Q8IUC2 63 aa7.98□□□□□ -1.13
SYNC-201ENST00000373484 MUC12Q9UKN1 5478 aa7.94□□□□□ -1.14
SYNC-201ENST00000373484 SPRR2FQ96RM1 72 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 199 ms