RNA–Protein interactions for RNA: ENST00000373344.9

ATRX-201, Transcript of ATRX, chromatin remodeler, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATRX, Length 11,220 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-201ENST00000373344 ALMS1Q8TCU4 4167 aa2.51□□□□□ -2.01
ATRX-201ENST00000373344 DNAH17Q9UFH2 4485 aa2.51□□□□□ -2.01
ATRX-201ENST00000373344 STARD9Q9P2P6 4700 aa2.5□□□□□ -2.01
ATRX-201ENST00000373344 KRTAP12-2P59991 146 aa2.5□□□□□ -2.01
ATRX-201ENST00000373344 DNAH6Q9C0G6 4158 aa2.5□□□□□ -2.01
ATRX-201ENST00000373344 FAT1Q14517 4588 aa2.5□□□□□ -2.01
ATRX-201ENST00000373344 LRP1BQ9NZR2 4599 aa2.49□□□□□ -2.01
ATRX-201ENST00000373344 DNAH5Q8TE73 4624 aa2.48□□□□□ -2.01
ATRX-201ENST00000373344 DNAH2Q9P225 4427 aa2.48□□□□□ -2.01
ATRX-201ENST00000373344 KRTAP3-1Q9BYR8 98 aa2.46□□□□□ -2.02
ATRX-201ENST00000373344 FAT2Q9NYQ8 4349 aa2.46□□□□□ -2.02
ATRX-201ENST00000373344 DNAH7Q8WXX0 4024 aa2.45□□□□□ -2.02
ATRX-201ENST00000373344 DNAH3Q8TD57 4116 aa2.44□□□□□ -2.02
ATRX-201ENST00000373344 DNAH8Q96JB1 4490 aa2.44□□□□□ -2.02
ATRX-201ENST00000373344 KRTAP12-1P59990 96 aa2.43□□□□□ -2.02
ATRX-201ENST00000373344 FAT3Q8TDW7 4589 aa2.43□□□□□ -2.02
ATRX-201ENST00000373344 DYNC2H1Q8NCM8 4307 aaKnown RBP2.42□□□□□ -2.02
ATRX-201ENST00000373344 SACSQ9NZJ4 4579 aa2.42□□□□□ -2.02
ATRX-201ENST00000373344 KRTAP13-4Q3LI77 160 aa2.42□□□□□ -2.02
ATRX-201ENST00000373344 CRCT1Q9UGL9 99 aa2.41□□□□□ -2.02
ATRX-201ENST00000373344 KRTAP10-4P60372 401 aaPredicted RBP2.41□□□□□ -2.02
ATRX-201ENST00000373344 DNHD1Q96M86 4753 aa2.4□□□□□ -2.03
ATRX-201ENST00000373344 PKHD1P08F94 4074 aa2.39□□□□□ -2.03
ATRX-201ENST00000373344 KRTAP15-1Q3LI76 137 aa2.38□□□□□ -2.03
ATRX-201ENST00000373344 KRTAP10-6P60371 365 aaPredicted RBP2.34□□□□□ -2.03
ATRX-201ENST00000373344 LPAP08519 4548 aa2.33□□□□□ -2.04
ATRX-201ENST00000373344 KRTAP10-12P60413 245 aa2.33□□□□□ -2.04
ATRX-201ENST00000373344 LORP23490 312 aaPredicted RBP2.33□□□□□ -2.04
ATRX-201ENST00000373344 HSPG2P98160 4391 aa2.32□□□□□ -2.04
ATRX-201ENST00000373344 DYNC1H1Q14204 4646 aaKnown RBP2.31□□□□□ -2.04
ATRX-201ENST00000373344 KRTAP3-3Q9BYR6 98 aa2.31□□□□□ -2.04
ATRX-201ENST00000373344 MYCBP2O75592 4640 aa2.29□□□□□ -2.04
ATRX-201ENST00000373344 LRP1Q07954 4544 aaKnown RBP2.28□□□□□ -2.04
ATRX-201ENST00000373344 APOBP04114 4563 aaKnown RBP2.27□□□□□ -2.05
ATRX-201ENST00000373344 KRTAP8-1Q8IUC2 63 aa2.26□□□□□ -2.05
ATRX-201ENST00000373344 MT1HP80294 61 aa2.25□□□□□ -2.05
ATRX-201ENST00000373344 PKD1P98161 4303 aa2.25□□□□□ -2.05
ATRX-201ENST00000373344 KRTAP3-2Q9BYR7 98 aa2.24□□□□□ -2.05
ATRX-201ENST00000373344 HECTD4Q9Y4D8 3996 aa2.23□□□□□ -2.05
ATRX-201ENST00000373344 KRTAP4-1Q9BYQ7 146 aa2.23□□□□□ -2.05
ATRX-201ENST00000373344 RYR1P21817 5038 aa2.23□□□□□ -2.05
ATRX-201ENST00000373344 LCE3AQ5TA76 89 aa2.23□□□□□ -2.05
ATRX-201ENST00000373344 KRTAP12-3P60328 96 aa2.22□□□□□ -2.05
ATRX-201ENST00000373344 RYR3Q15413 4870 aa2.21□□□□□ -2.05
ATRX-201ENST00000373344 HYDINQ4G0P3 5121 aa2.2□□□□□ -2.06
ATRX-201ENST00000373344 KRTAP19-4Q3LI73 84 aa2.19□□□□□ -2.06
ATRX-201ENST00000373344 PKHD1L1Q86WI1 4243 aa2.18□□□□□ -2.06
ATRX-201ENST00000373344 TNXBP22105 4242 aa2.16□□□□□ -2.06
ATRX-201ENST00000373344 SPRR2FQ96RM1 72 aa2.15□□□□□ -2.06
ATRX-201ENST00000373344 MT2AP02795 61 aa2.14□□□□□ -2.07
ATRX-201ENST00000373344 LRP2P98164 4655 aa2.13□□□□□ -2.07
ATRX-201ENST00000373344 KRTAP17-1Q9BYP8 105 aa2.12□□□□□ -2.07
ATRX-201ENST00000373344 KMT2CQ8NEZ4 4911 aaKnown RBP2.12□□□□□ -2.07
ATRX-201ENST00000373344 MT1FP04733 61 aa2.11□□□□□ -2.07
ATRX-201ENST00000373344 KRTAP10-5P60370 271 aa2.11□□□□□ -2.07
ATRX-201ENST00000373344 SPRR2GQ9BYE4 73 aa2.09□□□□□ -2.08
ATRX-201ENST00000373344 KRTAP10-7P60409 375 aaPredicted RBP2.08□□□□□ -2.08
ATRX-201ENST00000373344 FSIP2Q5CZC0 6907 aa2.06□□□□□ -2.08
ATRX-201ENST00000373344 KRTAP23-1A1A580 65 aa2.05□□□□□ -2.08
ATRX-201ENST00000373344 SPRR2EP22531 72 aa2.05□□□□□ -2.08
ATRX-201ENST00000373344 SPRR2BP35325 72 aa2.05□□□□□ -2.08
ATRX-201ENST00000373344 SPRR2AP35326 72 aa2.05□□□□□ -2.08
ATRX-201ENST00000373344 HERC2O95714 4834 aa2.04□□□□□ -2.08
ATRX-201ENST00000373344 KRTAP19-5Q3LI72 72 aa2.02□□□□□ -2.09
ATRX-201ENST00000373344 INE1O15225 51 aa2□□□□□ -2.09
ATRX-201ENST00000373344 SYNE2Q8WXH0 6885 aaKnown RBP1.98□□□□□ -2.09
ATRX-201ENST00000373344 KIAA1109Q2LD37 5005 aa1.97□□□□□ -2.09
ATRX-201ENST00000373344 SPRR2DP22532 72 aa1.97□□□□□ -2.09
ATRX-201ENST00000373344 KRTAP9-8Q9BYQ0 159 aa1.96□□□□□ -2.1
ATRX-201ENST00000373344 LCE2BO14633 110 aa1.95□□□□□ -2.1
ATRX-201ENST00000373344 KRTAP19-1Q8IUB9 90 aa1.95□□□□□ -2.1
ATRX-201ENST00000373344 RYR2Q92736 4967 aa1.94□□□□□ -2.1
ATRX-201ENST00000373344 MUC17Q685J3 4493 aa1.94□□□□□ -2.1
ATRX-201ENST00000373344 KRTAP4-8A0A0G2JLE6 195 aa1.94□□□□□ -2.1
ATRX-201ENST00000373344 KRTAP4-8Q9BYQ9 185 aa1.94□□□□□ -2.1
ATRX-201ENST00000373344 LCE3CQ5T5A8 94 aa1.93□□□□□ -2.1
ATRX-201ENST00000373344 FLGP20930 4061 aaPredicted RBP1.92□□□□□ -2.1
ATRX-201ENST00000373344 KRTAP9-2Q9BYQ4 174 aa1.91□□□□□ -2.1
ATRX-201ENST00000373344 KRTAP19-8Q3LI54 63 aa1.9□□□□□ -2.11
ATRX-201ENST00000373344 EPPK1P58107 5090 aaKnown RBP1.89□□□□□ -2.11
ATRX-201ENST00000373344 BIRC6Q9NR09 4857 aa1.89□□□□□ -2.11
ATRX-201ENST00000373344 LCE2CQ5TA81 110 aa1.89□□□□□ -2.11
ATRX-201ENST00000373344 MT1XP80297 61 aa1.88□□□□□ -2.11
ATRX-201ENST00000373344 MT1GP13640 62 aa1.88□□□□□ -2.11
ATRX-201ENST00000373344 MT1BP07438 61 aa1.88□□□□□ -2.11
ATRX-201ENST00000373344 LCE3BQ5TA77 95 aa1.87□□□□□ -2.11
ATRX-201ENST00000373344 KRTAP9-3Q9BYQ3 159 aa1.87□□□□□ -2.11
ATRX-201ENST00000373344 KRTAP12-4P60329 112 aa1.87□□□□□ -2.11
ATRX-201ENST00000373344 HERC1Q15751 4861 aa1.86□□□□□ -2.11
ATRX-201ENST00000373344 DSTQ03001 7570 aaKnown RBP1.85□□□□□ -2.11
ATRX-201ENST00000373344 MUC2Q02817 5179 aa1.84□□□□□ -2.11
ATRX-201ENST00000373344 HMCN2Q8NDA2 5059 aa1.83□□□□□ -2.12
ATRX-201ENST00000373344 MACF1Q9UPN3 7388 aaKnown RBP1.82□□□□□ -2.12
ATRX-201ENST00000373344 LCE2DQ5TA82 110 aaPredicted RBP1.81□□□□□ -2.12
ATRX-201ENST00000373344 KRTAP9-6A0A140TA67 174 aa1.8□□□□□ -2.12
ATRX-201ENST00000373344 MT4P47944 62 aa1.79□□□□□ -2.12
ATRX-201ENST00000373344 FAT4Q6V0I7 4981 aa1.78□□□□□ -2.12
ATRX-201ENST00000373344 OBSCNQ5VST9 7968 aa1.76□□□□□ -2.13
ATRX-201ENST00000373344 KRTAP19-3Q7Z4W3 81 aa1.76□□□□□ -2.13
ATRX-201ENST00000373344 KRTAP4-7Q9BYR0 210 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms