RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 KMT2CQ8NEZ4 4911 aaKnown RBP6.36□□□□□ -1.39
NCDN-202ENST00000373243 KRTAP3-1Q9BYR8 98 aa6.34□□□□□ -1.39
NCDN-202ENST00000373243 SACSQ9NZJ4 4579 aa6.32□□□□□ -1.4
NCDN-202ENST00000373243 VPS13BQ7Z7G8 4022 aa6.31□□□□□ -1.4
NCDN-202ENST00000373243 DYNC1H1Q14204 4646 aaKnown RBP6.31□□□□□ -1.4
NCDN-202ENST00000373243 A0A1B0GVY2 172 aa6.23□□□□□ -1.41
NCDN-202ENST00000373243 FAT2Q9NYQ8 4349 aa6.23□□□□□ -1.41
NCDN-202ENST00000373243 XP32Q5T750 250 aa6.19□□□□□ -1.42
NCDN-202ENST00000373243 M0QZ58 72 aa6.18□□□□□ -1.42
NCDN-202ENST00000373243 KRTAP13-4Q3LI77 160 aa6.18□□□□□ -1.42
NCDN-202ENST00000373243 R4GN34 69 aa6.18□□□□□ -1.42
NCDN-202ENST00000373243 KIAA1109Q2LD37 5005 aa6.18□□□□□ -1.42
NCDN-202ENST00000373243 PKD1P98161 4303 aa6.17□□□□□ -1.42
NCDN-202ENST00000373243 J3QL48 77 aa6.16□□□□□ -1.42
NCDN-202ENST00000373243 LRP1Q07954 4544 aaKnown RBP6.15□□□□□ -1.42
NCDN-202ENST00000373243 APOBP04114 4563 aaKnown RBP6.15□□□□□ -1.42
NCDN-202ENST00000373243 KRTAP10-8P60410 259 aa6.15□□□□□ -1.42
NCDN-202ENST00000373243 MYCBP2O75592 4640 aa6.15□□□□□ -1.43
NCDN-202ENST00000373243 RYR2Q92736 4967 aa6.14□□□□□ -1.43
NCDN-202ENST00000373243 RYR3Q15413 4870 aa6.11□□□□□ -1.43
NCDN-202ENST00000373243 KRTAP12-2P59991 146 aa6.09□□□□□ -1.43
NCDN-202ENST00000373243 CAMK2N1Q7Z7J9 78 aa6.08□□□□□ -1.44
NCDN-202ENST00000373243 PLAC4Q8WY50 150 aa6.06□□□□□ -1.44
NCDN-202ENST00000373243 KRTAP10-6P60371 365 aaPredicted RBP6.06□□□□□ -1.44
NCDN-202ENST00000373243 SEC61BP60468 96 aaKnown RBP6.05□□□□□ -1.44
NCDN-202ENST00000373243 FAT3Q8TDW7 4589 aa6.05□□□□□ -1.44
NCDN-202ENST00000373243 KRTAP10-4P60372 401 aaPredicted RBP6.04□□□□□ -1.44
NCDN-202ENST00000373243 RYR1P21817 5038 aa6.03□□□□□ -1.44
NCDN-202ENST00000373243 KRTAP3-3Q9BYR6 98 aa5.99□□□□□ -1.45
NCDN-202ENST00000373243 KRTAP17-1Q9BYP8 105 aa5.97□□□□□ -1.45
NCDN-202ENST00000373243 KRTAP4-5Q9BYR2 181 aa5.96□□□□□ -1.46
NCDN-202ENST00000373243 EPPK1P58107 5090 aaKnown RBP5.95□□□□□ -1.46
NCDN-202ENST00000373243 KRTAP3-2Q9BYR7 98 aa5.94□□□□□ -1.46
NCDN-202ENST00000373243 KRTAP12-1P59990 96 aa5.92□□□□□ -1.46
NCDN-202ENST00000373243 HSPG2P98160 4391 aa5.9□□□□□ -1.47
NCDN-202ENST00000373243 MT1HL1P0DM35 61 aa5.82□□□□□ -1.48
NCDN-202ENST00000373243 M0R2T5 61 aa5.79□□□□□ -1.48
NCDN-202ENST00000373243 PKHD1L1Q86WI1 4243 aa5.78□□□□□ -1.48
NCDN-202ENST00000373243 LRP2P98164 4655 aa5.76□□□□□ -1.49
NCDN-202ENST00000373243 HERC2O95714 4834 aa5.72□□□□□ -1.49
NCDN-202ENST00000373243 LPAP08519 4548 aa5.72□□□□□ -1.49
NCDN-202ENST00000373243 ABCA13Q86UQ4 5058 aa5.69□□□□□ -1.5
NCDN-202ENST00000373243 TNXBP22105 4242 aa5.65□□□□□ -1.5
NCDN-202ENST00000373243 LORP23490 312 aaPredicted RBP5.63□□□□□ -1.51
NCDN-202ENST00000373243 TNP1P09430 55 aa5.58□□□□□ -1.52
NCDN-202ENST00000373243 MUC2Q02817 5179 aa5.55□□□□□ -1.52
NCDN-202ENST00000373243 HERC1Q15751 4861 aa5.53□□□□□ -1.52
NCDN-202ENST00000373243 PP632Q6XCG6 107 aa5.49□□□□□ -1.53
NCDN-202ENST00000373243 PRO2289Q9P1D8 64 aa5.49□□□□□ -1.53
NCDN-202ENST00000373243 BIRC6Q9NR09 4857 aa5.46□□□□□ -1.54
NCDN-202ENST00000373243 KRTAP4-1Q9BYQ7 146 aa5.45□□□□□ -1.54
NCDN-202ENST00000373243 PCLOQ9Y6V0 5065 aa5.4□□□□□ -1.54
NCDN-202ENST00000373243 RNF213Q63HN8 5207 aa5.39□□□□□ -1.55
NCDN-202ENST00000373243 KRTAP10-10P60014 251 aa5.36□□□□□ -1.55
NCDN-202ENST00000373243 FAT4Q6V0I7 4981 aa5.3□□□□□ -1.56
NCDN-202ENST00000373243 UBR4Q5T4S7 5183 aa5.28□□□□□ -1.56
NCDN-202ENST00000373243 INE1O15225 51 aa5.21□□□□□ -1.57
NCDN-202ENST00000373243 HMCN2Q8NDA2 5059 aa5.14□□□□□ -1.59
NCDN-202ENST00000373243 SPRR5A0A1B0GTR4 108 aa5.11□□□□□ -1.59
NCDN-202ENST00000373243 LCE2DQ5TA82 110 aaPredicted RBP5.09□□□□□ -1.59
NCDN-202ENST00000373243 MUC17Q685J3 4493 aa5.09□□□□□ -1.6
NCDN-202ENST00000373243 LCE3AQ5TA76 89 aa5.06□□□□□ -1.6
NCDN-202ENST00000373243 FSIP2Q5CZC0 6907 aa4.98□□□□□ -1.61
NCDN-202ENST00000373243 KRTAP19-2Q3LHN2 52 aa4.96□□□□□ -1.61
NCDN-202ENST00000373243 FLGP20930 4061 aaPredicted RBP4.95□□□□□ -1.62
NCDN-202ENST00000373243 MT1HP80294 61 aa4.92□□□□□ -1.62
NCDN-202ENST00000373243 LCE2CQ5TA81 110 aa4.9□□□□□ -1.63
NCDN-202ENST00000373243 KRTAP10-12P60413 245 aa4.88□□□□□ -1.63
NCDN-202ENST00000373243 KRTAP19-1Q8IUB9 90 aa4.88□□□□□ -1.63
NCDN-202ENST00000373243 MT1FP04733 61 aa4.87□□□□□ -1.63
NCDN-202ENST00000373243 SPRR2GQ9BYE4 73 aa4.87□□□□□ -1.63
NCDN-202ENST00000373243 KRTAP12-3P60328 96 aa4.87□□□□□ -1.63
NCDN-202ENST00000373243 KRTAP23-1A1A580 65 aa4.86□□□□□ -1.63
NCDN-202ENST00000373243 MT2AP02795 61 aa4.86□□□□□ -1.63
NCDN-202ENST00000373243 USH2AO75445 5202 aa4.73□□□□□ -1.65
NCDN-202ENST00000373243 KRTAP9-8Q9BYQ0 159 aa4.69□□□□□ -1.66
NCDN-202ENST00000373243 KRTAP8-1Q8IUC2 63 aa4.67□□□□□ -1.66
NCDN-202ENST00000373243 KRTAP10-7P60409 375 aaPredicted RBP4.66□□□□□ -1.66
NCDN-202ENST00000373243 MT1XP80297 61 aa4.62□□□□□ -1.67
NCDN-202ENST00000373243 MT1BP07438 61 aa4.61□□□□□ -1.67
NCDN-202ENST00000373243 KRTAP10-5P60370 271 aa4.61□□□□□ -1.67
NCDN-202ENST00000373243 KRTAP19-8Q3LI54 63 aa4.57□□□□□ -1.68
NCDN-202ENST00000373243 KRTAP19-5Q3LI72 72 aa4.56□□□□□ -1.68
NCDN-202ENST00000373243 OBSCNQ5VST9 7968 aa4.52□□□□□ -1.69
NCDN-202ENST00000373243 CRCT1Q9UGL9 99 aa4.5□□□□□ -1.69
NCDN-202ENST00000373243 KMT2DO14686 5537 aa4.49□□□□□ -1.69
NCDN-202ENST00000373243 KRTAP9-3Q9BYQ3 159 aa4.49□□□□□ -1.69
NCDN-202ENST00000373243 KRTAP4-8A0A0G2JLE6 195 aa4.47□□□□□ -1.69
NCDN-202ENST00000373243 KRTAP4-8Q9BYQ9 185 aa4.47□□□□□ -1.69
NCDN-202ENST00000373243 LCE2BO14633 110 aa4.44□□□□□ -1.7
NCDN-202ENST00000373243 LCE3CQ5T5A8 94 aa4.43□□□□□ -1.7
NCDN-202ENST00000373243 LCE2AQ5TA79 106 aaPredicted RBP4.36□□□□□ -1.71
NCDN-202ENST00000373243 KRTAP4-7Q9BYR0 210 aa4.35□□□□□ -1.71
NCDN-202ENST00000373243 DSTQ03001 7570 aaKnown RBP4.32□□□□□ -1.72
NCDN-202ENST00000373243 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
NCDN-202ENST00000373243 SSPOA2VEC9 5147 aa4.21□□□□□ -1.73
NCDN-202ENST00000373243 FCGBPQ9Y6R7 5405 aaPredicted RBP4.16□□□□□ -1.74
NCDN-202ENST00000373243 KRTAP9-6A8MVA2 160 aa4.14□□□□□ -1.75
NCDN-202ENST00000373243 MUC12Q9UKN1 5478 aa4.09□□□□□ -1.75
NCDN-202ENST00000373243 MT1GP13640 62 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms