RNA–Protein interactions for RNA: ENST00000373190.5

PTPRT-204, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-204ENST00000373190 KRTAP10-12P60413 245 aa3.95□□□□□ -1.78
PTPRT-204ENST00000373190 KRTAP23-1A1A580 65 aa3.95□□□□□ -1.78
PTPRT-204ENST00000373190 DNAH7Q8WXX0 4024 aa3.94□□□□□ -1.78
PTPRT-204ENST00000373190 DNAH1Q9P2D7 4330 aa3.91□□□□□ -1.78
PTPRT-204ENST00000373190 ANK2Q01484 3957 aa3.91□□□□□ -1.78
PTPRT-204ENST00000373190 FRAS1Q86XX4 4008 aa3.87□□□□□ -1.79
PTPRT-204ENST00000373190 VPS13BQ7Z7G8 4022 aa3.87□□□□□ -1.79
PTPRT-204ENST00000373190 KRTAP12-3P60328 96 aa3.84□□□□□ -1.79
PTPRT-204ENST00000373190 KMT2AQ03164 3969 aa3.79□□□□□ -1.8
PTPRT-204ENST00000373190 CRCT1Q9UGL9 99 aa3.77□□□□□ -1.81
PTPRT-204ENST00000373190 LCE3AQ5TA76 89 aa3.77□□□□□ -1.81
PTPRT-204ENST00000373190 MT1HL1P0DM35 61 aa3.77□□□□□ -1.81
PTPRT-204ENST00000373190 DNAH10Q8IVF4 4471 aa3.76□□□□□ -1.81
PTPRT-204ENST00000373190 DNAH6Q9C0G6 4158 aa3.73□□□□□ -1.81
PTPRT-204ENST00000373190 DNAH9Q9NYC9 4486 aa3.7□□□□□ -1.82
PTPRT-204ENST00000373190 KRTAP10-4P60372 401 aaPredicted RBP3.68□□□□□ -1.82
PTPRT-204ENST00000373190 LORP23490 312 aaPredicted RBP3.65□□□□□ -1.82
PTPRT-204ENST00000373190 VPS13DQ5THJ4 4388 aa3.65□□□□□ -1.83
PTPRT-204ENST00000373190 DNAH11Q96DT5 4516 aa3.64□□□□□ -1.83
PTPRT-204ENST00000373190 PLECQ15149 4684 aaKnown RBP3.63□□□□□ -1.83
PTPRT-204ENST00000373190 KRTAP10-5P60370 271 aa3.62□□□□□ -1.83
PTPRT-204ENST00000373190 DNAH8Q96JB1 4490 aa3.61□□□□□ -1.83
PTPRT-204ENST00000373190 PRKDCP78527 4128 aaKnown RBP3.6□□□□□ -1.83
PTPRT-204ENST00000373190 DYNC2H1Q8NCM8 4307 aaKnown RBP3.58□□□□□ -1.84
PTPRT-204ENST00000373190 DNAH17Q9UFH2 4485 aa3.56□□□□□ -1.84
PTPRT-204ENST00000373190 FAT2Q9NYQ8 4349 aa3.56□□□□□ -1.84
PTPRT-204ENST00000373190 FLGP20930 4061 aaPredicted RBP3.56□□□□□ -1.84
PTPRT-204ENST00000373190 DNAH5Q8TE73 4624 aa3.55□□□□□ -1.84
PTPRT-204ENST00000373190 STARD9Q9P2P6 4700 aa3.54□□□□□ -1.84
PTPRT-204ENST00000373190 KRTAP4-5Q9BYR2 181 aa3.51□□□□□ -1.85
PTPRT-204ENST00000373190 KRTAP8-1Q8IUC2 63 aa3.49□□□□□ -1.85
PTPRT-204ENST00000373190 SPRR2GQ9BYE4 73 aa3.41□□□□□ -1.86
PTPRT-204ENST00000373190 APOBP04114 4563 aaKnown RBP3.4□□□□□ -1.87
PTPRT-204ENST00000373190 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
PTPRT-204ENST00000373190 LRP1BQ9NZR2 4599 aa3.38□□□□□ -1.87
PTPRT-204ENST00000373190 DYNC1H1Q14204 4646 aaKnown RBP3.35□□□□□ -1.87
PTPRT-204ENST00000373190 KRTAP19-5Q3LI72 72 aa3.34□□□□□ -1.87
PTPRT-204ENST00000373190 FAT1Q14517 4588 aa3.34□□□□□ -1.88
PTPRT-204ENST00000373190 KRTAP4-1Q9BYQ7 146 aa3.33□□□□□ -1.88
PTPRT-204ENST00000373190 PKHD1P08F94 4074 aa3.33□□□□□ -1.88
PTPRT-204ENST00000373190 MT1HP80294 61 aa3.32□□□□□ -1.88
PTPRT-204ENST00000373190 KRTAP19-4Q3LI73 84 aa3.32□□□□□ -1.88
PTPRT-204ENST00000373190 SACSQ9NZJ4 4579 aa3.31□□□□□ -1.88
PTPRT-204ENST00000373190 PKHD1L1Q86WI1 4243 aa3.28□□□□□ -1.89
PTPRT-204ENST00000373190 MT2AP02795 61 aa3.27□□□□□ -1.89
PTPRT-204ENST00000373190 KRTAP10-7P60409 375 aaPredicted RBP3.26□□□□□ -1.89
PTPRT-204ENST00000373190 RYR1P21817 5038 aa3.23□□□□□ -1.89
PTPRT-204ENST00000373190 MYCBP2O75592 4640 aa3.22□□□□□ -1.89
PTPRT-204ENST00000373190 MT1FP04733 61 aa3.22□□□□□ -1.89
PTPRT-204ENST00000373190 PKD1P98161 4303 aa3.2□□□□□ -1.9
PTPRT-204ENST00000373190 LRP1Q07954 4544 aaKnown RBP3.2□□□□□ -1.9
PTPRT-204ENST00000373190 SPRR2FQ96RM1 72 aa3.19□□□□□ -1.9
PTPRT-204ENST00000373190 SPRR5A0A1B0GTR4 108 aa3.15□□□□□ -1.9
PTPRT-204ENST00000373190 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
PTPRT-204ENST00000373190 TNXBP22105 4242 aa3.12□□□□□ -1.91
PTPRT-204ENST00000373190 FAT3Q8TDW7 4589 aa3.12□□□□□ -1.91
PTPRT-204ENST00000373190 LCE3BQ5TA77 95 aa3.11□□□□□ -1.91
PTPRT-204ENST00000373190 DNHD1Q96M86 4753 aa3.11□□□□□ -1.91
PTPRT-204ENST00000373190 RYR3Q15413 4870 aa3.1□□□□□ -1.91
PTPRT-204ENST00000373190 KRTAP19-8Q3LI54 63 aa3.09□□□□□ -1.92
PTPRT-204ENST00000373190 HSPG2P98160 4391 aa3.08□□□□□ -1.92
PTPRT-204ENST00000373190 KRTAP19-1Q8IUB9 90 aa3.07□□□□□ -1.92
PTPRT-204ENST00000373190 MT1XP80297 61 aa3.07□□□□□ -1.92
PTPRT-204ENST00000373190 MT1GP13640 62 aa3.01□□□□□ -1.93
PTPRT-204ENST00000373190 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
PTPRT-204ENST00000373190 LRP2P98164 4655 aa2.95□□□□□ -1.94
PTPRT-204ENST00000373190 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
PTPRT-204ENST00000373190 MT1BP07438 61 aa2.93□□□□□ -1.94
PTPRT-204ENST00000373190 SPRR2EP22531 72 aa2.93□□□□□ -1.94
PTPRT-204ENST00000373190 SPRR2BP35325 72 aa2.93□□□□□ -1.94
PTPRT-204ENST00000373190 SPRR2AP35326 72 aa2.93□□□□□ -1.94
PTPRT-204ENST00000373190 RYR2Q92736 4967 aa2.89□□□□□ -1.95
PTPRT-204ENST00000373190 HYDINQ4G0P3 5121 aa2.89□□□□□ -1.95
PTPRT-204ENST00000373190 KRTAP4-8A0A0G2JLE6 195 aa2.89□□□□□ -1.95
PTPRT-204ENST00000373190 KRTAP4-8Q9BYQ9 185 aa2.89□□□□□ -1.95
PTPRT-204ENST00000373190 KRTAP9-8Q9BYQ0 159 aa2.88□□□□□ -1.95
PTPRT-204ENST00000373190 LCE2BO14633 110 aa2.88□□□□□ -1.95
PTPRT-204ENST00000373190 PCLOQ9Y6V0 5065 aa2.87□□□□□ -1.95
PTPRT-204ENST00000373190 LPAP08519 4548 aa2.86□□□□□ -1.95
PTPRT-204ENST00000373190 KMT2CQ8NEZ4 4911 aaKnown RBP2.86□□□□□ -1.95
PTPRT-204ENST00000373190 SPRR2DP22532 72 aa2.85□□□□□ -1.95
PTPRT-204ENST00000373190 MT1LQ93083 61 aa2.82□□□□□ -1.96
PTPRT-204ENST00000373190 MUC17Q685J3 4493 aa2.82□□□□□ -1.96
PTPRT-204ENST00000373190 KRTAP9-3Q9BYQ3 159 aa2.81□□□□□ -1.96
PTPRT-204ENST00000373190 KRTAP19-3Q7Z4W3 81 aa2.8□□□□□ -1.96
PTPRT-204ENST00000373190 PRM1P04553 51 aa2.77□□□□□ -1.97
PTPRT-204ENST00000373190 KRTAP4-7Q9BYR0 210 aa2.76□□□□□ -1.97
PTPRT-204ENST00000373190 KIAA1109Q2LD37 5005 aa2.75□□□□□ -1.97
PTPRT-204ENST00000373190 MT1EP04732 61 aa2.74□□□□□ -1.97
PTPRT-204ENST00000373190 KRTAP17-1Q9BYP8 105 aa2.74□□□□□ -1.97
PTPRT-204ENST00000373190 LCE2CQ5TA81 110 aa2.74□□□□□ -1.97
PTPRT-204ENST00000373190 BIRC6Q9NR09 4857 aa2.72□□□□□ -1.97
PTPRT-204ENST00000373190 HERC2O95714 4834 aa2.71□□□□□ -1.98
PTPRT-204ENST00000373190 MT1MQ8N339 61 aa2.66□□□□□ -1.98
PTPRT-204ENST00000373190 MT3P25713 68 aa2.65□□□□□ -1.99
PTPRT-204ENST00000373190 HERC1Q15751 4861 aa2.65□□□□□ -1.99
PTPRT-204ENST00000373190 LOC100996750A0A140TA64 210 aa2.64□□□□□ -1.99
PTPRT-204ENST00000373190 KRTAP19-2Q3LHN2 52 aa2.62□□□□□ -1.99
PTPRT-204ENST00000373190 KRTAP2-3P0C7H8 128 aa2.6□□□□□ -1.99
PTPRT-204ENST00000373190 KRTAP2-4Q9BYR9 128 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms