RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 RPL37P61927 97 aaKnown RBP6.57□□□□□ -1.36
CTPS1-202ENST00000372621 MYCBP2O75592 4640 aa6.55□□□□□ -1.36
CTPS1-202ENST00000372621 XP32Q5T750 250 aa6.54□□□□□ -1.36
CTPS1-202ENST00000372621 KRTAP10-6P60371 365 aaPredicted RBP6.54□□□□□ -1.36
CTPS1-202ENST00000372621 RYR1P21817 5038 aa6.53□□□□□ -1.36
CTPS1-202ENST00000372621 Q5VSD8 79 aa6.53□□□□□ -1.36
CTPS1-202ENST00000372621 KRTAP3-2Q9BYR7 98 aa6.49□□□□□ -1.37
CTPS1-202ENST00000372621 KRTAP25-1Q3LHN0 102 aa6.48□□□□□ -1.37
CTPS1-202ENST00000372621 DMBT1Q9UGM3 2413 aaPredicted RBP6.48□□□□□ -1.37
CTPS1-202ENST00000372621 RYR3Q15413 4870 aa6.47□□□□□ -1.37
CTPS1-202ENST00000372621 KRTAP17-1Q9BYP8 105 aa6.47□□□□□ -1.37
CTPS1-202ENST00000372621 KRTAP13-4Q3LI77 160 aa6.46□□□□□ -1.37
CTPS1-202ENST00000372621 K7ERS5 55 aa6.46□□□□□ -1.38
CTPS1-202ENST00000372621 S4R3F8 94 aa6.45□□□□□ -1.38
CTPS1-202ENST00000372621 MT1HL1P0DM35 61 aa6.41□□□□□ -1.38
CTPS1-202ENST00000372621 LPAP08519 4548 aa6.41□□□□□ -1.38
CTPS1-202ENST00000372621 KIAA1109Q2LD37 5005 aa6.38□□□□□ -1.39
CTPS1-202ENST00000372621 P0C880 135 aa6.37□□□□□ -1.39
CTPS1-202ENST00000372621 ROMO1P60602 79 aa6.37□□□□□ -1.39
CTPS1-202ENST00000372621 A0A0D9SG42 100 aa6.34□□□□□ -1.39
CTPS1-202ENST00000372621 LRP2P98164 4655 aa6.34□□□□□ -1.4
CTPS1-202ENST00000372621 CRIPTQ9P021 101 aa6.33□□□□□ -1.4
CTPS1-202ENST00000372621 TPRXLQ17RH7 258 aa6.28□□□□□ -1.4
CTPS1-202ENST00000372621 KRTAP12-2P59991 146 aa6.25□□□□□ -1.41
CTPS1-202ENST00000372621 ABCA13Q86UQ4 5058 aa6.22□□□□□ -1.41
CTPS1-202ENST00000372621 EPPK1P58107 5090 aaKnown RBP6.22□□□□□ -1.41
CTPS1-202ENST00000372621 KRTAP12-1P59990 96 aa6.2□□□□□ -1.42
CTPS1-202ENST00000372621 M0QZ58 72 aa6.17□□□□□ -1.42
CTPS1-202ENST00000372621 C10orf95Q9H7T3 257 aa6.13□□□□□ -1.43
CTPS1-202ENST00000372621 SPINT4Q6UDR6 99 aa6.12□□□□□ -1.43
CTPS1-202ENST00000372621 MUC17Q685J3 4493 aa6.12□□□□□ -1.43
CTPS1-202ENST00000372621 KRTAP4-5Q9BYR2 181 aa6.07□□□□□ -1.44
CTPS1-202ENST00000372621 H3BS24 57 aa6.04□□□□□ -1.44
CTPS1-202ENST00000372621 SEC61BP60468 96 aaKnown RBP6□□□□□ -1.45
CTPS1-202ENST00000372621 KRTAP4-1Q9BYQ7 146 aa5.99□□□□□ -1.45
CTPS1-202ENST00000372621 R4GN34 69 aa5.97□□□□□ -1.45
CTPS1-202ENST00000372621 KRTAP15-1Q3LI76 137 aa5.95□□□□□ -1.46
CTPS1-202ENST00000372621 LORP23490 312 aaPredicted RBP5.95□□□□□ -1.46
CTPS1-202ENST00000372621 KRTAP19-2Q3LHN2 52 aa5.93□□□□□ -1.46
CTPS1-202ENST00000372621 HERC2O95714 4834 aa5.88□□□□□ -1.47
CTPS1-202ENST00000372621 J3QL48 77 aa5.82□□□□□ -1.48
CTPS1-202ENST00000372621 FLGP20930 4061 aaPredicted RBP5.81□□□□□ -1.48
CTPS1-202ENST00000372621 MUC2Q02817 5179 aa5.79□□□□□ -1.48
CTPS1-202ENST00000372621 BIRC6Q9NR09 4857 aa5.77□□□□□ -1.49
CTPS1-202ENST00000372621 NDUFAF8A1L188 74 aa5.74□□□□□ -1.49
CTPS1-202ENST00000372621 HERC1Q15751 4861 aa5.68□□□□□ -1.5
CTPS1-202ENST00000372621 CAMK2N1Q7Z7J9 78 aa5.65□□□□□ -1.5
CTPS1-202ENST00000372621 PCLOQ9Y6V0 5065 aa5.65□□□□□ -1.5
CTPS1-202ENST00000372621 PLAC4Q8WY50 150 aa5.64□□□□□ -1.51
CTPS1-202ENST00000372621 PP632Q6XCG6 107 aa5.63□□□□□ -1.51
CTPS1-202ENST00000372621 HMCN2Q8NDA2 5059 aa5.6□□□□□ -1.51
CTPS1-202ENST00000372621 LCE2CQ5TA81 110 aa5.53□□□□□ -1.52
CTPS1-202ENST00000372621 FAT4Q6V0I7 4981 aa5.51□□□□□ -1.53
CTPS1-202ENST00000372621 KRTAP23-1A1A580 65 aa5.48□□□□□ -1.53
CTPS1-202ENST00000372621 TNP1P09430 55 aa5.48□□□□□ -1.53
CTPS1-202ENST00000372621 SPRR2GQ9BYE4 73 aa5.46□□□□□ -1.54
CTPS1-202ENST00000372621 KRTAP19-1Q8IUB9 90 aa5.42□□□□□ -1.54
CTPS1-202ENST00000372621 LCE2DQ5TA82 110 aaPredicted RBP5.38□□□□□ -1.55
CTPS1-202ENST00000372621 RNF213Q63HN8 5207 aa5.36□□□□□ -1.55
CTPS1-202ENST00000372621 MT1HP80294 61 aa5.35□□□□□ -1.55
CTPS1-202ENST00000372621 LUZP6Q538Z0 58 aa5.34□□□□□ -1.56
CTPS1-202ENST00000372621 SPRR5A0A1B0GTR4 108 aa5.32□□□□□ -1.56
CTPS1-202ENST00000372621 UBR4Q5T4S7 5183 aa5.32□□□□□ -1.56
CTPS1-202ENST00000372621 M0R2T5 61 aa5.29□□□□□ -1.56
CTPS1-202ENST00000372621 MT1FP04733 61 aa5.29□□□□□ -1.56
CTPS1-202ENST00000372621 MT2AP02795 61 aa5.28□□□□□ -1.56
CTPS1-202ENST00000372621 KRTAP9-8Q9BYQ0 159 aa5.26□□□□□ -1.57
CTPS1-202ENST00000372621 KRTAP10-10P60014 251 aa5.23□□□□□ -1.57
CTPS1-202ENST00000372621 KRTAP19-8Q3LI54 63 aa5.21□□□□□ -1.58
CTPS1-202ENST00000372621 LCE3AQ5TA76 89 aa5.21□□□□□ -1.58
CTPS1-202ENST00000372621 MT1BP07438 61 aa5.14□□□□□ -1.59
CTPS1-202ENST00000372621 KRTAP10-5P60370 271 aa5.12□□□□□ -1.59
CTPS1-202ENST00000372621 MT1XP80297 61 aa5.11□□□□□ -1.59
CTPS1-202ENST00000372621 KRTAP8-1Q8IUC2 63 aa5.11□□□□□ -1.59
CTPS1-202ENST00000372621 A0A0A0MQY5 61 aa5.08□□□□□ -1.6
CTPS1-202ENST00000372621 KRTAP9-3Q9BYQ3 159 aa5.03□□□□□ -1.6
CTPS1-202ENST00000372621 KRTAP10-12P60413 245 aa4.99□□□□□ -1.61
CTPS1-202ENST00000372621 KRTAP10-7P60409 375 aaPredicted RBP4.96□□□□□ -1.62
CTPS1-202ENST00000372621 KRTAP12-3P60328 96 aa4.95□□□□□ -1.62
CTPS1-202ENST00000372621 PRO2289Q9P1D8 64 aa4.85□□□□□ -1.63
CTPS1-202ENST00000372621 LCE2BO14633 110 aa4.82□□□□□ -1.64
CTPS1-202ENST00000372621 USH2AO75445 5202 aa4.75□□□□□ -1.65
CTPS1-202ENST00000372621 KRTAP19-5Q3LI72 72 aa4.74□□□□□ -1.65
CTPS1-202ENST00000372621 KMT2DO14686 5537 aa4.71□□□□□ -1.66
CTPS1-202ENST00000372621 LCE2AQ5TA79 106 aaPredicted RBP4.71□□□□□ -1.66
CTPS1-202ENST00000372621 LCE3CQ5T5A8 94 aa4.68□□□□□ -1.66
CTPS1-202ENST00000372621 INE1O15225 51 aa4.65□□□□□ -1.66
CTPS1-202ENST00000372621 KRTAP4-8A0A0G2JLE6 195 aa4.63□□□□□ -1.67
CTPS1-202ENST00000372621 KRTAP4-8Q9BYQ9 185 aa4.63□□□□□ -1.67
CTPS1-202ENST00000372621 KRTAP19-7Q3SYF9 63 aa4.56□□□□□ -1.68
CTPS1-202ENST00000372621 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
CTPS1-202ENST00000372621 SSPOA2VEC9 5147 aa4.46□□□□□ -1.7
CTPS1-202ENST00000372621 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
CTPS1-202ENST00000372621 KRTAP4-7Q9BYR0 210 aa4.44□□□□□ -1.7
CTPS1-202ENST00000372621 MT1LQ93083 61 aa4.42□□□□□ -1.7
CTPS1-202ENST00000372621 MT1EP04732 61 aa4.41□□□□□ -1.7
CTPS1-202ENST00000372621 KRTAP2-3P0C7H8 128 aa4.4□□□□□ -1.7
CTPS1-202ENST00000372621 KRTAP2-4Q9BYR9 128 aa4.4□□□□□ -1.7
CTPS1-202ENST00000372621 KRTAP2-1Q9BYU5 128 aa4.4□□□□□ -1.7
CTPS1-202ENST00000372621 KRTAP19-6Q3LI70 58 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms