RNA–Protein interactions for RNA: ENST00000372597.5

SCMH1-207, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SCMH1, Length 3,252 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-207ENST00000372597 ROMO1P60602 79 aa5.48□□□□□ -1.53
SCMH1-207ENST00000372597 XP32Q5T750 250 aa5.48□□□□□ -1.53
SCMH1-207ENST00000372597 KRTAP10-6P60371 365 aaPredicted RBP5.45□□□□□ -1.54
SCMH1-207ENST00000372597 KRTAP3-3Q9BYR6 98 aa5.45□□□□□ -1.54
SCMH1-207ENST00000372597 APOBP04114 4563 aaKnown RBP5.45□□□□□ -1.54
SCMH1-207ENST00000372597 KRTAP13-4Q3LI77 160 aa5.43□□□□□ -1.54
SCMH1-207ENST00000372597 P0C880 135 aa5.42□□□□□ -1.54
SCMH1-207ENST00000372597 PKHD1L1Q86WI1 4243 aa5.41□□□□□ -1.54
SCMH1-207ENST00000372597 LRP1Q07954 4544 aaKnown RBP5.41□□□□□ -1.54
SCMH1-207ENST00000372597 KRTAP3-2Q9BYR7 98 aa5.4□□□□□ -1.55
SCMH1-207ENST00000372597 SPINT4Q6UDR6 99 aa5.39□□□□□ -1.55
SCMH1-207ENST00000372597 MYCBP2O75592 4640 aa5.37□□□□□ -1.55
SCMH1-207ENST00000372597 FAT3Q8TDW7 4589 aa5.33□□□□□ -1.56
SCMH1-207ENST00000372597 C10orf95Q9H7T3 257 aa5.32□□□□□ -1.56
SCMH1-207ENST00000372597 HSPG2P98160 4391 aa5.3□□□□□ -1.56
SCMH1-207ENST00000372597 RYR2Q92736 4967 aa5.3□□□□□ -1.56
SCMH1-207ENST00000372597 KMT2CQ8NEZ4 4911 aaKnown RBP5.29□□□□□ -1.56
SCMH1-207ENST00000372597 KRTAP12-2P59991 146 aa5.29□□□□□ -1.56
SCMH1-207ENST00000372597 TPRXLQ17RH7 258 aa5.29□□□□□ -1.56
SCMH1-207ENST00000372597 MT1HL1P0DM35 61 aa5.27□□□□□ -1.57
SCMH1-207ENST00000372597 TNXBP22105 4242 aa5.25□□□□□ -1.57
SCMH1-207ENST00000372597 M0QZ58 72 aa5.24□□□□□ -1.57
SCMH1-207ENST00000372597 KRTAP12-1P59990 96 aa5.24□□□□□ -1.57
SCMH1-207ENST00000372597 KRTAP17-1Q9BYP8 105 aa5.23□□□□□ -1.57
SCMH1-207ENST00000372597 R4GN34 69 aa5.19□□□□□ -1.58
SCMH1-207ENST00000372597 KIAA1109Q2LD37 5005 aa5.18□□□□□ -1.58
SCMH1-207ENST00000372597 RYR1P21817 5038 aa5.15□□□□□ -1.59
SCMH1-207ENST00000372597 LRP2P98164 4655 aa5.14□□□□□ -1.59
SCMH1-207ENST00000372597 RYR3Q15413 4870 aa5.13□□□□□ -1.59
SCMH1-207ENST00000372597 NDUFAF8A1L188 74 aa5.12□□□□□ -1.59
SCMH1-207ENST00000372597 SEC61BP60468 96 aaKnown RBP5.11□□□□□ -1.59
SCMH1-207ENST00000372597 LPAP08519 4548 aa5.08□□□□□ -1.6
SCMH1-207ENST00000372597 J3QL48 77 aa5.06□□□□□ -1.6
SCMH1-207ENST00000372597 KRTAP4-5Q9BYR2 181 aa5.03□□□□□ -1.6
SCMH1-207ENST00000372597 KRTAP15-1Q3LI76 137 aa5.03□□□□□ -1.6
SCMH1-207ENST00000372597 CAMK2N1Q7Z7J9 78 aa4.99□□□□□ -1.61
SCMH1-207ENST00000372597 LORP23490 312 aaPredicted RBP4.98□□□□□ -1.61
SCMH1-207ENST00000372597 KRTAP4-1Q9BYQ7 146 aa4.93□□□□□ -1.62
SCMH1-207ENST00000372597 ABCA13Q86UQ4 5058 aa4.93□□□□□ -1.62
SCMH1-207ENST00000372597 EPPK1P58107 5090 aaKnown RBP4.92□□□□□ -1.62
SCMH1-207ENST00000372597 A0A0A0MQY5 61 aa4.9□□□□□ -1.62
SCMH1-207ENST00000372597 PLAC4Q8WY50 150 aa4.89□□□□□ -1.63
SCMH1-207ENST00000372597 PP632Q6XCG6 107 aa4.8□□□□□ -1.64
SCMH1-207ENST00000372597 LUZP6Q538Z0 58 aa4.78□□□□□ -1.64
SCMH1-207ENST00000372597 MUC17Q685J3 4493 aa4.76□□□□□ -1.65
SCMH1-207ENST00000372597 KRTAP19-2Q3LHN2 52 aa4.75□□□□□ -1.65
SCMH1-207ENST00000372597 TNP1P09430 55 aa4.73□□□□□ -1.65
SCMH1-207ENST00000372597 HERC2O95714 4834 aa4.72□□□□□ -1.65
SCMH1-207ENST00000372597 MUC2Q02817 5179 aa4.7□□□□□ -1.66
SCMH1-207ENST00000372597 M0R2T5 61 aa4.68□□□□□ -1.66
SCMH1-207ENST00000372597 FLGP20930 4061 aaPredicted RBP4.6□□□□□ -1.67
SCMH1-207ENST00000372597 PCLOQ9Y6V0 5065 aa4.54□□□□□ -1.68
SCMH1-207ENST00000372597 BIRC6Q9NR09 4857 aa4.53□□□□□ -1.68
SCMH1-207ENST00000372597 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
SCMH1-207ENST00000372597 KRTAP10-10P60014 251 aa4.51□□□□□ -1.69
SCMH1-207ENST00000372597 SPRR2GQ9BYE4 73 aa4.48□□□□□ -1.69
SCMH1-207ENST00000372597 HERC1Q15751 4861 aa4.48□□□□□ -1.69
SCMH1-207ENST00000372597 LCE2CQ5TA81 110 aa4.48□□□□□ -1.69
SCMH1-207ENST00000372597 KRTAP19-1Q8IUB9 90 aa4.47□□□□□ -1.69
SCMH1-207ENST00000372597 FAT4Q6V0I7 4981 aa4.46□□□□□ -1.69
SCMH1-207ENST00000372597 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
SCMH1-207ENST00000372597 MT1HP80294 61 aa4.41□□□□□ -1.7
SCMH1-207ENST00000372597 HMCN2Q8NDA2 5059 aa4.38□□□□□ -1.71
SCMH1-207ENST00000372597 MT1FP04733 61 aa4.38□□□□□ -1.71
SCMH1-207ENST00000372597 MT2AP02795 61 aa4.38□□□□□ -1.71
SCMH1-207ENST00000372597 SPRR5A0A1B0GTR4 108 aa4.37□□□□□ -1.71
SCMH1-207ENST00000372597 RNF213Q63HN8 5207 aa4.34□□□□□ -1.71
SCMH1-207ENST00000372597 KRTAP9-8Q9BYQ0 159 aa4.29□□□□□ -1.72
SCMH1-207ENST00000372597 UBR4Q5T4S7 5183 aa4.28□□□□□ -1.73
SCMH1-207ENST00000372597 KRTAP19-8Q3LI54 63 aa4.25□□□□□ -1.73
SCMH1-207ENST00000372597 KRTAP8-1Q8IUC2 63 aa4.24□□□□□ -1.73
SCMH1-207ENST00000372597 KRTAP10-12P60413 245 aa4.24□□□□□ -1.73
SCMH1-207ENST00000372597 KRTAP12-3P60328 96 aa4.22□□□□□ -1.73
SCMH1-207ENST00000372597 MT1BP07438 61 aa4.22□□□□□ -1.73
SCMH1-207ENST00000372597 KRTAP10-5P60370 271 aa4.22□□□□□ -1.73
SCMH1-207ENST00000372597 MT1XP80297 61 aa4.21□□□□□ -1.74
SCMH1-207ENST00000372597 PRO2289Q9P1D8 64 aa4.17□□□□□ -1.74
SCMH1-207ENST00000372597 KRTAP10-7P60409 375 aaPredicted RBP4.14□□□□□ -1.75
SCMH1-207ENST00000372597 KRTAP9-3Q9BYQ3 159 aa4.1□□□□□ -1.75
SCMH1-207ENST00000372597 INE1O15225 51 aa4□□□□□ -1.77
SCMH1-207ENST00000372597 KRTAP19-5Q3LI72 72 aa4□□□□□ -1.77
SCMH1-207ENST00000372597 LCE2BO14633 110 aa3.95□□□□□ -1.78
SCMH1-207ENST00000372597 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
SCMH1-207ENST00000372597 KRTAP4-8A0A0G2JLE6 195 aa3.9□□□□□ -1.79
SCMH1-207ENST00000372597 KRTAP4-8Q9BYQ9 185 aa3.9□□□□□ -1.79
SCMH1-207ENST00000372597 USH2AO75445 5202 aa3.89□□□□□ -1.79
SCMH1-207ENST00000372597 KMT2DO14686 5537 aa3.86□□□□□ -1.79
SCMH1-207ENST00000372597 KRTAP4-7Q9BYR0 210 aa3.76□□□□□ -1.81
SCMH1-207ENST00000372597 LCE2AQ5TA79 106 aaPredicted RBP3.76□□□□□ -1.81
SCMH1-207ENST00000372597 KRTAP9-6A8MVA2 160 aa3.76□□□□□ -1.81
SCMH1-207ENST00000372597 FSIP2Q5CZC0 6907 aa3.74□□□□□ -1.81
SCMH1-207ENST00000372597 KRTAP19-7Q3SYF9 63 aa3.74□□□□□ -1.81
SCMH1-207ENST00000372597 MT1LQ93083 61 aa3.66□□□□□ -1.82
SCMH1-207ENST00000372597 MT1EP04732 61 aa3.64□□□□□ -1.83
SCMH1-207ENST00000372597 KRTAP19-4Q3LI73 84 aa3.62□□□□□ -1.83
SCMH1-207ENST00000372597 KRTAP2-3P0C7H8 128 aa3.62□□□□□ -1.83
SCMH1-207ENST00000372597 KRTAP2-4Q9BYR9 128 aa3.62□□□□□ -1.83
SCMH1-207ENST00000372597 KRTAP2-1Q9BYU5 128 aa3.62□□□□□ -1.83
SCMH1-207ENST00000372597 CRCT1Q9UGL9 99 aa3.54□□□□□ -1.84
SCMH1-207ENST00000372597 KRTAP9-2Q9BYQ4 174 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms