RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 RYR3Q15413 4870 aa4.7□□□□□ -1.66
NUP188-201ENST00000372577 KRTAP4-5Q9BYR2 181 aa4.7□□□□□ -1.66
NUP188-201ENST00000372577 CMYA5Q8N3K9 4069 aa4.69□□□□□ -1.66
NUP188-201ENST00000372577 KRTAP23-1A1A580 65 aa4.68□□□□□ -1.66
NUP188-201ENST00000372577 KRTAP15-1Q3LI76 137 aa4.68□□□□□ -1.66
NUP188-201ENST00000372577 HYDINQ4G0P3 5121 aa4.67□□□□□ -1.66
NUP188-201ENST00000372577 INE1O15225 51 aa4.63□□□□□ -1.67
NUP188-201ENST00000372577 DNAH10Q8IVF4 4471 aa4.63□□□□□ -1.67
NUP188-201ENST00000372577 DNAH1Q9P2D7 4330 aa4.61□□□□□ -1.67
NUP188-201ENST00000372577 LYSTQ99698 3801 aa4.6□□□□□ -1.67
NUP188-201ENST00000372577 DNAH5Q8TE73 4624 aa4.6□□□□□ -1.67
NUP188-201ENST00000372577 VPS13DQ5THJ4 4388 aa4.59□□□□□ -1.67
NUP188-201ENST00000372577 DNAH17Q9UFH2 4485 aa4.59□□□□□ -1.67
NUP188-201ENST00000372577 FRAS1Q86XX4 4008 aa4.59□□□□□ -1.68
NUP188-201ENST00000372577 KRTAP10-12P60413 245 aa4.59□□□□□ -1.68
NUP188-201ENST00000372577 DNAH2Q9P225 4427 aa4.57□□□□□ -1.68
NUP188-201ENST00000372577 PLECQ15149 4684 aaKnown RBP4.57□□□□□ -1.68
NUP188-201ENST00000372577 EPPK1P58107 5090 aaKnown RBP4.56□□□□□ -1.68
NUP188-201ENST00000372577 DNAH11Q96DT5 4516 aa4.55□□□□□ -1.68
NUP188-201ENST00000372577 STARD9Q9P2P6 4700 aa4.53□□□□□ -1.68
NUP188-201ENST00000372577 CRCT1Q9UGL9 99 aa4.52□□□□□ -1.69
NUP188-201ENST00000372577 DNAH3Q8TD57 4116 aa4.52□□□□□ -1.69
NUP188-201ENST00000372577 DNAH7Q8WXX0 4024 aa4.5□□□□□ -1.69
NUP188-201ENST00000372577 KIAA1109Q2LD37 5005 aa4.49□□□□□ -1.69
NUP188-201ENST00000372577 RYR1P21817 5038 aa4.48□□□□□ -1.69
NUP188-201ENST00000372577 LORP23490 312 aaPredicted RBP4.46□□□□□ -1.7
NUP188-201ENST00000372577 KMT2AQ03164 3969 aa4.46□□□□□ -1.7
NUP188-201ENST00000372577 KRTAP12-3P60328 96 aa4.46□□□□□ -1.7
NUP188-201ENST00000372577 SACSQ9NZJ4 4579 aa4.45□□□□□ -1.7
NUP188-201ENST00000372577 PCLOQ9Y6V0 5065 aa4.45□□□□□ -1.7
NUP188-201ENST00000372577 DYNC1H1Q14204 4646 aaKnown RBP4.43□□□□□ -1.7
NUP188-201ENST00000372577 DYNC2H1Q8NCM8 4307 aaKnown RBP4.42□□□□□ -1.7
NUP188-201ENST00000372577 PKHD1P08F94 4074 aa4.41□□□□□ -1.7
NUP188-201ENST00000372577 RYR2Q92736 4967 aa4.41□□□□□ -1.7
NUP188-201ENST00000372577 LCE3AQ5TA76 89 aa4.4□□□□□ -1.7
NUP188-201ENST00000372577 KRTAP4-1Q9BYQ7 146 aa4.37□□□□□ -1.71
NUP188-201ENST00000372577 LRP1BQ9NZR2 4599 aa4.37□□□□□ -1.71
NUP188-201ENST00000372577 FAT2Q9NYQ8 4349 aa4.35□□□□□ -1.71
NUP188-201ENST00000372577 DNAH6Q9C0G6 4158 aa4.33□□□□□ -1.72
NUP188-201ENST00000372577 MT1HP80294 61 aa4.31□□□□□ -1.72
NUP188-201ENST00000372577 SPRR2GQ9BYE4 73 aa4.31□□□□□ -1.72
NUP188-201ENST00000372577 DNAH8Q96JB1 4490 aa4.3□□□□□ -1.72
NUP188-201ENST00000372577 HERC1Q15751 4861 aa4.25□□□□□ -1.73
NUP188-201ENST00000372577 MT2AP02795 61 aa4.25□□□□□ -1.73
NUP188-201ENST00000372577 MYCBP2O75592 4640 aa4.24□□□□□ -1.73
NUP188-201ENST00000372577 FAT1Q14517 4588 aa4.24□□□□□ -1.73
NUP188-201ENST00000372577 ABCA13Q86UQ4 5058 aa4.22□□□□□ -1.73
NUP188-201ENST00000372577 BIRC6Q9NR09 4857 aa4.21□□□□□ -1.74
NUP188-201ENST00000372577 HERC2O95714 4834 aa4.2□□□□□ -1.74
NUP188-201ENST00000372577 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
NUP188-201ENST00000372577 KRTAP10-5P60370 271 aa4.15□□□□□ -1.75
NUP188-201ENST00000372577 HSPG2P98160 4391 aa4.15□□□□□ -1.75
NUP188-201ENST00000372577 APOBP04114 4563 aaKnown RBP4.15□□□□□ -1.75
NUP188-201ENST00000372577 MT1FP04733 61 aa4.15□□□□□ -1.75
NUP188-201ENST00000372577 PKD1P98161 4303 aa4.13□□□□□ -1.75
NUP188-201ENST00000372577 VPS13BQ7Z7G8 4022 aa4.13□□□□□ -1.75
NUP188-201ENST00000372577 KRTAP19-4Q3LI73 84 aa4.12□□□□□ -1.75
NUP188-201ENST00000372577 HECTD4Q9Y4D8 3996 aa4.12□□□□□ -1.75
NUP188-201ENST00000372577 RNF213Q63HN8 5207 aa4.11□□□□□ -1.75
NUP188-201ENST00000372577 KRTAP17-1Q9BYP8 105 aa4.09□□□□□ -1.75
NUP188-201ENST00000372577 FAT3Q8TDW7 4589 aa4.08□□□□□ -1.76
NUP188-201ENST00000372577 LRP1Q07954 4544 aaKnown RBP4.07□□□□□ -1.76
NUP188-201ENST00000372577 KRTAP19-8Q3LI54 63 aa4.05□□□□□ -1.76
NUP188-201ENST00000372577 UBR4Q5T4S7 5183 aa4.03□□□□□ -1.76
NUP188-201ENST00000372577 KRTAP19-1Q8IUB9 90 aa3.99□□□□□ -1.77
NUP188-201ENST00000372577 KRTAP19-5Q3LI72 72 aa3.98□□□□□ -1.77
NUP188-201ENST00000372577 LRP2P98164 4655 aa3.97□□□□□ -1.77
NUP188-201ENST00000372577 MUC2Q02817 5179 aa3.96□□□□□ -1.77
NUP188-201ENST00000372577 LCE3CQ5T5A8 94 aa3.95□□□□□ -1.78
NUP188-201ENST00000372577 KRTAP9-8Q9BYQ0 159 aa3.86□□□□□ -1.79
NUP188-201ENST00000372577 MT1XP80297 61 aa3.86□□□□□ -1.79
NUP188-201ENST00000372577 SPRR2FQ96RM1 72 aa3.85□□□□□ -1.79
NUP188-201ENST00000372577 KRTAP10-7P60409 375 aaPredicted RBP3.85□□□□□ -1.79
NUP188-201ENST00000372577 MT1BP07438 61 aa3.85□□□□□ -1.79
NUP188-201ENST00000372577 LCE2CQ5TA81 110 aa3.84□□□□□ -1.79
NUP188-201ENST00000372577 HMCN2Q8NDA2 5059 aa3.81□□□□□ -1.8
NUP188-201ENST00000372577 FAT4Q6V0I7 4981 aa3.79□□□□□ -1.8
NUP188-201ENST00000372577 KRTAP9-3Q9BYQ3 159 aa3.78□□□□□ -1.8
NUP188-201ENST00000372577 PKHD1L1Q86WI1 4243 aa3.78□□□□□ -1.8
NUP188-201ENST00000372577 SPRR5A0A1B0GTR4 108 aa3.75□□□□□ -1.81
NUP188-201ENST00000372577 KRTAP19-2Q3LHN2 52 aa3.71□□□□□ -1.82
NUP188-201ENST00000372577 LPAP08519 4548 aa3.7□□□□□ -1.82
NUP188-201ENST00000372577 TNXBP22105 4242 aa3.68□□□□□ -1.82
NUP188-201ENST00000372577 FSIP2Q5CZC0 6907 aa3.66□□□□□ -1.82
NUP188-201ENST00000372577 MT1GP13640 62 aa3.65□□□□□ -1.83
NUP188-201ENST00000372577 SPRR2EP22531 72 aa3.62□□□□□ -1.83
NUP188-201ENST00000372577 SPRR2BP35325 72 aa3.62□□□□□ -1.83
NUP188-201ENST00000372577 SPRR2AP35326 72 aa3.62□□□□□ -1.83
NUP188-201ENST00000372577 MUC17Q685J3 4493 aa3.6□□□□□ -1.83
NUP188-201ENST00000372577 FLGP20930 4061 aaPredicted RBP3.58□□□□□ -1.84
NUP188-201ENST00000372577 KRTAP4-8A0A0G2JLE6 195 aa3.57□□□□□ -1.84
NUP188-201ENST00000372577 KRTAP4-8Q9BYQ9 185 aa3.57□□□□□ -1.84
NUP188-201ENST00000372577 LCE2BO14633 110 aa3.55□□□□□ -1.84
NUP188-201ENST00000372577 SPRR2DP22532 72 aa3.51□□□□□ -1.85
NUP188-201ENST00000372577 KRTAP19-3Q7Z4W3 81 aa3.5□□□□□ -1.85
NUP188-201ENST00000372577 MT1LQ93083 61 aa3.49□□□□□ -1.85
NUP188-201ENST00000372577 LCE3BQ5TA77 95 aa3.49□□□□□ -1.85
NUP188-201ENST00000372577 MT1EP04732 61 aa3.48□□□□□ -1.85
NUP188-201ENST00000372577 KRTAP12-4P60329 112 aa3.46□□□□□ -1.85
NUP188-201ENST00000372577 KRTAP19-6Q3LI70 58 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms