RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 LINC01554Q52M75 96 aa2.82□□□□□ -1.96
YIPF3-201ENST00000372417 KRTAP4-7Q9BYR0 210 aa2.82□□□□□ -1.96
YIPF3-201ENST00000372417 A0A1B0GW54 56 aa2.8□□□□□ -1.96
YIPF3-201ENST00000372417 NDUFC1O43677 76 aa2.8□□□□□ -1.96
YIPF3-201ENST00000372417 KRTAP4-11Q9BYQ6 195 aa2.8□□□□□ -1.96
YIPF3-201ENST00000372417 PAM16Q9Y3D7 125 aa2.8□□□□□ -1.96
YIPF3-201ENST00000372417 NREPQ16612 68 aa2.78□□□□□ -1.96
YIPF3-201ENST00000372417 KRTAP4-3Q9BYR4 195 aa2.78□□□□□ -1.96
YIPF3-201ENST00000372417 CASC2Q6XLA1 102 aa2.77□□□□□ -1.97
YIPF3-201ENST00000372417 PRO1854Q9UHT4 67 aa2.77□□□□□ -1.97
YIPF3-201ENST00000372417 HSBP1L1C9JCN9 74 aa2.76□□□□□ -1.97
YIPF3-201ENST00000372417 HIST1H2BKO60814 126 aa2.76□□□□□ -1.97
YIPF3-201ENST00000372417 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
YIPF3-201ENST00000372417 HIST1H2BJP06899 126 aa2.76□□□□□ -1.97
YIPF3-201ENST00000372417 HIST1H2BOP23527 126 aa2.76□□□□□ -1.97
YIPF3-201ENST00000372417 HIST1H2BBP33778 126 aa2.76□□□□□ -1.97
YIPF3-201ENST00000372417 HIST1H2BDP58876 126 aa2.76□□□□□ -1.97
YIPF3-201ENST00000372417 HIST1H2BCP62807 126 aa2.76□□□□□ -1.97
YIPF3-201ENST00000372417 HIST2H2BEQ16778 126 aa2.76□□□□□ -1.97
YIPF3-201ENST00000372417 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.76□□□□□ -1.97
YIPF3-201ENST00000372417 HIST1H2BHQ93079 126 aa2.76□□□□□ -1.97
YIPF3-201ENST00000372417 HIST1H2BNQ99877 126 aa2.76□□□□□ -1.97
YIPF3-201ENST00000372417 HIST1H2BMQ99879 126 aa2.76□□□□□ -1.97
YIPF3-201ENST00000372417 C20orf197Q8N268 126 aa2.75□□□□□ -1.97
YIPF3-201ENST00000372417 P0C880 135 aa2.74□□□□□ -1.97
YIPF3-201ENST00000372417 KRTAP12-4P60329 112 aa2.74□□□□□ -1.97
YIPF3-201ENST00000372417 CEND1Q8N111 149 aa2.74□□□□□ -1.97
YIPF3-201ENST00000372417 PSMB2P49721 201 aa2.73□□□□□ -1.97
YIPF3-201ENST00000372417 LOC110117498A0A087WWA1 95 aa2.71□□□□□ -1.98
YIPF3-201ENST00000372417 COX6CP09669 75 aa2.71□□□□□ -1.98
YIPF3-201ENST00000372417 KRTAP19-5Q3LI72 72 aa2.71□□□□□ -1.98
YIPF3-201ENST00000372417 KRTAP15-1Q3LI76 137 aa2.71□□□□□ -1.98
YIPF3-201ENST00000372417 COA6Q5JTJ3 125 aaKnown RBP2.71□□□□□ -1.98
YIPF3-201ENST00000372417 MT1LQ93083 61 aa2.71□□□□□ -1.98
YIPF3-201ENST00000372417 SYNE1Q8NF91 8797 aaKnown RBP2.7□□□□□ -1.98
YIPF3-201ENST00000372417 BATFQ16520 125 aa2.69□□□□□ -1.98
YIPF3-201ENST00000372417 HIST3H2BBQ8N257 126 aa2.69□□□□□ -1.98
YIPF3-201ENST00000372417 NAA38Q9BRA0 125 aaKnown RBP2.69□□□□□ -1.98
YIPF3-201ENST00000372417 KRTAP9-9Q9BYP9 154 aa2.69□□□□□ -1.98
YIPF3-201ENST00000372417 KRTAP9-4Q9BYQ2 154 aa2.69□□□□□ -1.98
YIPF3-201ENST00000372417 JMJD7-PLA2G4BH0Y9G9 81 aa2.68□□□□□ -1.98
YIPF3-201ENST00000372417 BPY2O14599 106 aa2.68□□□□□ -1.98
YIPF3-201ENST00000372417 BAALC-AS2P0C853 105 aa2.68□□□□□ -1.98
YIPF3-201ENST00000372417 COX8AP10176 69 aa2.68□□□□□ -1.98
YIPF3-201ENST00000372417 Q8N9L7 120 aa2.67□□□□□ -1.98
YIPF3-201ENST00000372417 K7EP34 96 aa2.66□□□□□ -1.98
YIPF3-201ENST00000372417 DLEU1O43261 78 aa2.66□□□□□ -1.98
YIPF3-201ENST00000372417 HIGD1BQ9P298 99 aa2.66□□□□□ -1.98
YIPF3-201ENST00000372417 A0A1W2PPM0 123 aa2.65□□□□□ -1.99
YIPF3-201ENST00000372417 MT-ATP8P03928 68 aa2.65□□□□□ -1.99
YIPF3-201ENST00000372417 KRTAP5-5Q701N2 237 aaPredicted RBP2.65□□□□□ -1.99
YIPF3-201ENST00000372417 HIST1H2BLQ99880 126 aa2.65□□□□□ -1.99
YIPF3-201ENST00000372417 FXYD2P54710 66 aa2.64□□□□□ -1.99
YIPF3-201ENST00000372417 CYP4F30PQ9H0H9 118 aa2.64□□□□□ -1.99
YIPF3-201ENST00000372417 C14orf132Q9NPU4 83 aa2.64□□□□□ -1.99
YIPF3-201ENST00000372417 K7ERJ3 54 aa2.61□□□□□ -1.99
YIPF3-201ENST00000372417 ACYP1P07311 99 aa2.6□□□□□ -1.99
YIPF3-201ENST00000372417 SCGB1C2P0DMR2 95 aa2.6□□□□□ -1.99
YIPF3-201ENST00000372417 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
YIPF3-201ENST00000372417 TP53AIP1Q9HCN2 124 aa2.6□□□□□ -1.99
YIPF3-201ENST00000372417 A0A0D9SG42 100 aa2.59□□□□□ -1.99
YIPF3-201ENST00000372417 C14orf144Q96I85 54 aa2.59□□□□□ -1.99
YIPF3-201ENST00000372417 CAMK2N1Q7Z7J9 78 aa2.56□□□□□ -2
YIPF3-201ENST00000372417 TRAV22A0A0B4J277 110 aa2.55□□□□□ -2
YIPF3-201ENST00000372417 LOC101927531A0A1B0GV80 90 aa2.55□□□□□ -2
YIPF3-201ENST00000372417 ATXN8Q156A1 80 aa2.55□□□□□ -2
YIPF3-201ENST00000372417 VAMP8Q9BV40 100 aa2.53□□□□□ -2
YIPF3-201ENST00000372417 S100A2P29034 98 aa2.51□□□□□ -2.01
YIPF3-201ENST00000372417 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
YIPF3-201ENST00000372417 SPATA45Q537H7 98 aa2.5□□□□□ -2.01
YIPF3-201ENST00000372417 HSD52Q0P140 79 aa2.48□□□□□ -2.01
YIPF3-201ENST00000372417 C10orf95Q9H7T3 257 aa2.45□□□□□ -2.02
YIPF3-201ENST00000372417 PRAC1Q96KF2 57 aa2.44□□□□□ -2.02
YIPF3-201ENST00000372417 LCE3AQ5TA76 89 aa2.4□□□□□ -2.03
YIPF3-201ENST00000372417 S100A6P06703 90 aa2.39□□□□□ -2.03
YIPF3-201ENST00000372417 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
YIPF3-201ENST00000372417 SPCS1Q9Y6A9 102 aa2.39□□□□□ -2.03
YIPF3-201ENST00000372417 KRTAP4-2Q9BYR5 136 aa2.38□□□□□ -2.03
YIPF3-201ENST00000372417 UBL5Q9BZL1 73 aa2.38□□□□□ -2.03
YIPF3-201ENST00000372417 TSTD3H0UI37 97 aa2.37□□□□□ -2.03
YIPF3-201ENST00000372417 H0Y9P7 68 aa2.37□□□□□ -2.03
YIPF3-201ENST00000372417 ATOX1O00244 68 aa2.37□□□□□ -2.03
YIPF3-201ENST00000372417 S100A1P23297 94 aa2.33□□□□□ -2.04
YIPF3-201ENST00000372417 KRTAP6-2Q3LI66 62 aa2.33□□□□□ -2.04
YIPF3-201ENST00000372417 OCR1Q9BZK8 76 aa2.33□□□□□ -2.04
YIPF3-201ENST00000372417 PCP4L1A6NKN8 68 aa2.32□□□□□ -2.04
YIPF3-201ENST00000372417 H3BT86 120 aa2.32□□□□□ -2.04
YIPF3-201ENST00000372417 KRTAP6-1Q3LI64 71 aa2.32□□□□□ -2.04
YIPF3-201ENST00000372417 KRTAP13-4Q3LI77 160 aa2.32□□□□□ -2.04
YIPF3-201ENST00000372417 UQCRQO14949 82 aa2.3□□□□□ -2.04
YIPF3-201ENST00000372417 MT1AP04731 61 aa2.3□□□□□ -2.04
YIPF3-201ENST00000372417 SEC61GP60059 68 aa2.29□□□□□ -2.04
YIPF3-201ENST00000372417 DMAC1Q96GE9 116 aa2.28□□□□□ -2.04
YIPF3-201ENST00000372417 KRTAP12-3P60328 96 aa2.27□□□□□ -2.05
YIPF3-201ENST00000372417 LINC00208Q96KT6 92 aa2.27□□□□□ -2.05
YIPF3-201ENST00000372417 NDUFAF8A1L188 74 aa2.24□□□□□ -2.05
YIPF3-201ENST00000372417 UQCR10Q9UDW1 63 aa2.24□□□□□ -2.05
YIPF3-201ENST00000372417 LOC105371267A0A1B0GV96 52 aa2.23□□□□□ -2.05
YIPF3-201ENST00000372417 TAX1BP3O14907 124 aa2.23□□□□□ -2.05
YIPF3-201ENST00000372417 SPTSSBQ8NFR3 76 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms